BLASTX nr result

ID: Coptis25_contig00026265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026265
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302114.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-39
ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula] g...   164   7e-39
ref|XP_003518924.1| PREDICTED: uncharacterized protein At3g63140...   160   1e-37
gb|ACU24035.1| unknown [Glycine max]                                  160   1e-37
ref|XP_003536518.1| PREDICTED: uncharacterized protein At3g63140...   158   5e-37

>ref|XP_002302114.1| predicted protein [Populus trichocarpa] gi|222843840|gb|EEE81387.1|
           predicted protein [Populus trichocarpa]
          Length = 404

 Score =  164 bits (416), Expect = 5e-39
 Identities = 79/88 (89%), Positives = 85/88 (96%)
 Frame = -1

Query: 264 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 85
           AEKKKVLI+NTNSGGHAVIGFYFAKELL SGHEVT+LTVGEESSDKMKKPPF+RFSEIVS
Sbjct: 75  AEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEESSDKMKKPPFSRFSEIVS 134

Query: 84  SGGETVWGNPADVGKVVGGVAFDVVLDN 1
           +GG+TVWGNPA+VGKVV G AFDVVLDN
Sbjct: 135 AGGKTVWGNPAEVGKVVEGAAFDVVLDN 162


>ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula]
           gi|355479697|gb|AES60900.1| MRNA-binding protein
           [Medicago truncatula]
          Length = 401

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/88 (89%), Positives = 83/88 (94%)
 Frame = -1

Query: 264 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 85
           AEKKKVLIINTNSGGHAVIGFYFAKELL +GH VT+LTVG+ESSDKMKKPPFNRFSEIVS
Sbjct: 72  AEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKMKKPPFNRFSEIVS 131

Query: 84  SGGETVWGNPADVGKVVGGVAFDVVLDN 1
           +GG TVWGNPADVG VVGG AFDVVLDN
Sbjct: 132 AGGSTVWGNPADVGSVVGGEAFDVVLDN 159


>ref|XP_003518924.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like
           [Glycine max]
          Length = 403

 Score =  160 bits (404), Expect = 1e-37
 Identities = 75/88 (85%), Positives = 81/88 (92%)
 Frame = -1

Query: 264 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 85
           AEKKKVLI+NTNSGGHA+IGFYFAKELL +GH VT+LTVGEE SDKMKKPPFNRFSEIVS
Sbjct: 74  AEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKMKKPPFNRFSEIVS 133

Query: 84  SGGETVWGNPADVGKVVGGVAFDVVLDN 1
           +GG TVWGNPA+VG VVGG  FDVVLDN
Sbjct: 134 AGGRTVWGNPAEVGSVVGGEVFDVVLDN 161


>gb|ACU24035.1| unknown [Glycine max]
          Length = 403

 Score =  160 bits (404), Expect = 1e-37
 Identities = 75/88 (85%), Positives = 81/88 (92%)
 Frame = -1

Query: 264 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 85
           AEKKKVLI+NTNSGGHA+IGFYFAKELL +GH VT+LTVGEE SDKMKKPPFNRFSEIVS
Sbjct: 74  AEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKMKKPPFNRFSEIVS 133

Query: 84  SGGETVWGNPADVGKVVGGVAFDVVLDN 1
           +GG TVWGNPA+VG VVGG  FDVVLDN
Sbjct: 134 AGGRTVWGNPAEVGSVVGGEVFDVVLDN 161


>ref|XP_003536518.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like
           [Glycine max]
          Length = 404

 Score =  158 bits (399), Expect = 5e-37
 Identities = 74/88 (84%), Positives = 80/88 (90%)
 Frame = -1

Query: 264 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 85
           AEKKKVLI+NTNSGGHA+IGFYFAKELL +GH VT+LTVG+E SDKMKKPPFNRFSEIVS
Sbjct: 75  AEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGDEGSDKMKKPPFNRFSEIVS 134

Query: 84  SGGETVWGNPADVGKVVGGVAFDVVLDN 1
           +GG TVWGNPA VG VVGG  FDVVLDN
Sbjct: 135 AGGRTVWGNPAQVGSVVGGEVFDVVLDN 162


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