BLASTX nr result
ID: Coptis25_contig00026265
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00026265 (330 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002302114.1| predicted protein [Populus trichocarpa] gi|2... 164 5e-39 ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula] g... 164 7e-39 ref|XP_003518924.1| PREDICTED: uncharacterized protein At3g63140... 160 1e-37 gb|ACU24035.1| unknown [Glycine max] 160 1e-37 ref|XP_003536518.1| PREDICTED: uncharacterized protein At3g63140... 158 5e-37 >ref|XP_002302114.1| predicted protein [Populus trichocarpa] gi|222843840|gb|EEE81387.1| predicted protein [Populus trichocarpa] Length = 404 Score = 164 bits (416), Expect = 5e-39 Identities = 79/88 (89%), Positives = 85/88 (96%) Frame = -1 Query: 264 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 85 AEKKKVLI+NTNSGGHAVIGFYFAKELL SGHEVT+LTVGEESSDKMKKPPF+RFSEIVS Sbjct: 75 AEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEESSDKMKKPPFSRFSEIVS 134 Query: 84 SGGETVWGNPADVGKVVGGVAFDVVLDN 1 +GG+TVWGNPA+VGKVV G AFDVVLDN Sbjct: 135 AGGKTVWGNPAEVGKVVEGAAFDVVLDN 162 >ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula] gi|355479697|gb|AES60900.1| MRNA-binding protein [Medicago truncatula] Length = 401 Score = 164 bits (415), Expect = 7e-39 Identities = 79/88 (89%), Positives = 83/88 (94%) Frame = -1 Query: 264 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 85 AEKKKVLIINTNSGGHAVIGFYFAKELL +GH VT+LTVG+ESSDKMKKPPFNRFSEIVS Sbjct: 72 AEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKMKKPPFNRFSEIVS 131 Query: 84 SGGETVWGNPADVGKVVGGVAFDVVLDN 1 +GG TVWGNPADVG VVGG AFDVVLDN Sbjct: 132 AGGSTVWGNPADVGSVVGGEAFDVVLDN 159 >ref|XP_003518924.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like [Glycine max] Length = 403 Score = 160 bits (404), Expect = 1e-37 Identities = 75/88 (85%), Positives = 81/88 (92%) Frame = -1 Query: 264 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 85 AEKKKVLI+NTNSGGHA+IGFYFAKELL +GH VT+LTVGEE SDKMKKPPFNRFSEIVS Sbjct: 74 AEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKMKKPPFNRFSEIVS 133 Query: 84 SGGETVWGNPADVGKVVGGVAFDVVLDN 1 +GG TVWGNPA+VG VVGG FDVVLDN Sbjct: 134 AGGRTVWGNPAEVGSVVGGEVFDVVLDN 161 >gb|ACU24035.1| unknown [Glycine max] Length = 403 Score = 160 bits (404), Expect = 1e-37 Identities = 75/88 (85%), Positives = 81/88 (92%) Frame = -1 Query: 264 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 85 AEKKKVLI+NTNSGGHA+IGFYFAKELL +GH VT+LTVGEE SDKMKKPPFNRFSEIVS Sbjct: 74 AEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKMKKPPFNRFSEIVS 133 Query: 84 SGGETVWGNPADVGKVVGGVAFDVVLDN 1 +GG TVWGNPA+VG VVGG FDVVLDN Sbjct: 134 AGGRTVWGNPAEVGSVVGGEVFDVVLDN 161 >ref|XP_003536518.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like [Glycine max] Length = 404 Score = 158 bits (399), Expect = 5e-37 Identities = 74/88 (84%), Positives = 80/88 (90%) Frame = -1 Query: 264 AEKKKVLIINTNSGGHAVIGFYFAKELLSSGHEVTVLTVGEESSDKMKKPPFNRFSEIVS 85 AEKKKVLI+NTNSGGHA+IGFYFAKELL +GH VT+LTVG+E SDKMKKPPFNRFSEIVS Sbjct: 75 AEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGDEGSDKMKKPPFNRFSEIVS 134 Query: 84 SGGETVWGNPADVGKVVGGVAFDVVLDN 1 +GG TVWGNPA VG VVGG FDVVLDN Sbjct: 135 AGGRTVWGNPAQVGSVVGGEVFDVVLDN 162