BLASTX nr result

ID: Coptis25_contig00026246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026246
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEZ06405.1| VRN5-like protein [Aquilegia coerulea]                 216   2e-54
ref|XP_002515582.1| conserved hypothetical protein [Ricinus comm...   200   1e-49
ref|XP_002331732.1| predicted protein [Populus trichocarpa] gi|2...   199   1e-49
ref|XP_002324971.1| predicted protein [Populus trichocarpa] gi|2...   199   2e-49
ref|XP_002281934.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   192   2e-47

>gb|AEZ06405.1| VRN5-like protein [Aquilegia coerulea]
          Length = 696

 Score =  216 bits (549), Expect = 2e-54
 Identities = 107/140 (76%), Positives = 117/140 (83%), Gaps = 6/140 (4%)
 Frame = -2

Query: 453 SQTWLVRPIRELPAVD------RKRMSSTNEDTYDCDSVLMDASPLNRSSGSGRLDGSYE 292
           SQ WLV+ I+ LP V+      RKR+S  +++ YDCDSVLM+ S L  SSGS  LDGSYE
Sbjct: 557 SQAWLVKQIKGLPTVESRTGLCRKRISRNDDEAYDCDSVLMNNSSLRLSSGSNHLDGSYE 616

Query: 291 YCVKIIRWLECEGHIEQEFRMKFLTWFSLRSTEQERMVVITYIQTLIDDPVSLAGQLVDS 112
           YCVKIIRWLEC+GHIEQEFRMKFLTWFSLRSTEQER VV TYIQTLIDDP SLAGQLVDS
Sbjct: 617 YCVKIIRWLECKGHIEQEFRMKFLTWFSLRSTEQERKVVNTYIQTLIDDPSSLAGQLVDS 676

Query: 111 FLDIISGKRQRNGFCSKLWH 52
           FLDIISGKR R+GFCSKLWH
Sbjct: 677 FLDIISGKRLRSGFCSKLWH 696


>ref|XP_002515582.1| conserved hypothetical protein [Ricinus communis]
            gi|223545526|gb|EEF47031.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 725

 Score =  200 bits (508), Expect = 1e-49
 Identities = 99/140 (70%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
 Frame = -2

Query: 453  SQTWLVRPIRELPAVD------RKRMSSTNEDTYDCDSVLMDASPLNRSSGSGRLDGSYE 292
            SQTW   P  E+PAVD      RKR + +NE+ +DCDS L++ SP   S+GSG LD ++E
Sbjct: 586  SQTWTDGPSGEVPAVDSRAELCRKRAAHSNEEMHDCDSTLINGSPFRVSTGSGCLDENFE 645

Query: 291  YCVKIIRWLECEGHIEQEFRMKFLTWFSLRSTEQERMVVITYIQTLIDDPVSLAGQLVDS 112
            YCVKIIRWLECEGHI QEFR+K LTWFSLRSTEQER VV T+IQTLIDDP SLAGQLVDS
Sbjct: 646  YCVKIIRWLECEGHINQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDS 705

Query: 111  FLDIISGKRQRNGFCSKLWH 52
            F DIIS KR RNGFCSKLWH
Sbjct: 706  FSDIISSKRPRNGFCSKLWH 725


>ref|XP_002331732.1| predicted protein [Populus trichocarpa] gi|222874135|gb|EEF11266.1|
           predicted protein [Populus trichocarpa]
          Length = 612

 Score =  199 bits (507), Expect = 1e-49
 Identities = 98/140 (70%), Positives = 109/140 (77%), Gaps = 6/140 (4%)
 Frame = -2

Query: 453 SQTWLVRPIRELPAVD------RKRMSSTNEDTYDCDSVLMDASPLNRSSGSGRLDGSYE 292
           SQTW+  P RE+P VD      RKR + TNED +DCDS L++ SP   SSGSG LD ++E
Sbjct: 473 SQTWMHGPSREVPTVDSRSELCRKRAAHTNEDVHDCDSTLINESPFRVSSGSGYLDENFE 532

Query: 291 YCVKIIRWLECEGHIEQEFRMKFLTWFSLRSTEQERMVVITYIQTLIDDPVSLAGQLVDS 112
           YCVK IRWLECEG+I QEFR+K LTWFSLRSTEQER VV T+IQTLIDDP SL GQLVDS
Sbjct: 533 YCVKAIRWLECEGYINQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLGGQLVDS 592

Query: 111 FLDIISGKRQRNGFCSKLWH 52
           F DIIS KR RNGFC KLWH
Sbjct: 593 FSDIISSKRPRNGFCGKLWH 612


>ref|XP_002324971.1| predicted protein [Populus trichocarpa] gi|222866405|gb|EEF03536.1|
           predicted protein [Populus trichocarpa]
          Length = 717

 Score =  199 bits (506), Expect = 2e-49
 Identities = 98/140 (70%), Positives = 109/140 (77%), Gaps = 6/140 (4%)
 Frame = -2

Query: 453 SQTWLVRPIRELPAVD------RKRMSSTNEDTYDCDSVLMDASPLNRSSGSGRLDGSYE 292
           SQTW+  P  E+P VD      RKR +  NED +DCDS L++ SP + SSGSG LD ++E
Sbjct: 578 SQTWMHGPSGEVPTVDSRSELCRKRAAHANEDLHDCDSTLINGSPFHVSSGSGYLDENFE 637

Query: 291 YCVKIIRWLECEGHIEQEFRMKFLTWFSLRSTEQERMVVITYIQTLIDDPVSLAGQLVDS 112
           YCVK IRWLECEGHI QEFR+K LTWFSLRSTEQER VV T+IQTLIDDP SLAGQLVDS
Sbjct: 638 YCVKTIRWLECEGHINQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDS 697

Query: 111 FLDIISGKRQRNGFCSKLWH 52
           F DIIS KR RNGFC KLWH
Sbjct: 698 FSDIISSKRPRNGFCGKLWH 717


>ref|XP_002281934.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis
           vinifera]
          Length = 646

 Score =  192 bits (489), Expect = 2e-47
 Identities = 95/140 (67%), Positives = 109/140 (77%), Gaps = 6/140 (4%)
 Frame = -2

Query: 453 SQTWLVRPIRELPAVD------RKRMSSTNEDTYDCDSVLMDASPLNRSSGSGRLDGSYE 292
           SQT  +R IRE+PAV+      RK+  S+  + YDC S L++ SPL   +GSG LD SYE
Sbjct: 507 SQTCKIRAIREVPAVESRTELCRKQTLSSKSEAYDCVSTLINGSPLQVCAGSGHLDRSYE 566

Query: 291 YCVKIIRWLECEGHIEQEFRMKFLTWFSLRSTEQERMVVITYIQTLIDDPVSLAGQLVDS 112
           YCVKIIRWLECEGHI QEFRMKFLTWFSLRSTEQER VV  +IQTLI+DP SLAGQL+DS
Sbjct: 567 YCVKIIRWLECEGHIGQEFRMKFLTWFSLRSTEQERRVVHAFIQTLIEDPSSLAGQLIDS 626

Query: 111 FLDIISGKRQRNGFCSKLWH 52
           F DI+  KR RNGFCS+LWH
Sbjct: 627 FSDIVKSKRTRNGFCSELWH 646


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