BLASTX nr result
ID: Coptis25_contig00026246
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00026246 (454 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEZ06405.1| VRN5-like protein [Aquilegia coerulea] 216 2e-54 ref|XP_002515582.1| conserved hypothetical protein [Ricinus comm... 200 1e-49 ref|XP_002331732.1| predicted protein [Populus trichocarpa] gi|2... 199 1e-49 ref|XP_002324971.1| predicted protein [Populus trichocarpa] gi|2... 199 2e-49 ref|XP_002281934.1| PREDICTED: protein VERNALIZATION INSENSITIVE... 192 2e-47 >gb|AEZ06405.1| VRN5-like protein [Aquilegia coerulea] Length = 696 Score = 216 bits (549), Expect = 2e-54 Identities = 107/140 (76%), Positives = 117/140 (83%), Gaps = 6/140 (4%) Frame = -2 Query: 453 SQTWLVRPIRELPAVD------RKRMSSTNEDTYDCDSVLMDASPLNRSSGSGRLDGSYE 292 SQ WLV+ I+ LP V+ RKR+S +++ YDCDSVLM+ S L SSGS LDGSYE Sbjct: 557 SQAWLVKQIKGLPTVESRTGLCRKRISRNDDEAYDCDSVLMNNSSLRLSSGSNHLDGSYE 616 Query: 291 YCVKIIRWLECEGHIEQEFRMKFLTWFSLRSTEQERMVVITYIQTLIDDPVSLAGQLVDS 112 YCVKIIRWLEC+GHIEQEFRMKFLTWFSLRSTEQER VV TYIQTLIDDP SLAGQLVDS Sbjct: 617 YCVKIIRWLECKGHIEQEFRMKFLTWFSLRSTEQERKVVNTYIQTLIDDPSSLAGQLVDS 676 Query: 111 FLDIISGKRQRNGFCSKLWH 52 FLDIISGKR R+GFCSKLWH Sbjct: 677 FLDIISGKRLRSGFCSKLWH 696 >ref|XP_002515582.1| conserved hypothetical protein [Ricinus communis] gi|223545526|gb|EEF47031.1| conserved hypothetical protein [Ricinus communis] Length = 725 Score = 200 bits (508), Expect = 1e-49 Identities = 99/140 (70%), Positives = 111/140 (79%), Gaps = 6/140 (4%) Frame = -2 Query: 453 SQTWLVRPIRELPAVD------RKRMSSTNEDTYDCDSVLMDASPLNRSSGSGRLDGSYE 292 SQTW P E+PAVD RKR + +NE+ +DCDS L++ SP S+GSG LD ++E Sbjct: 586 SQTWTDGPSGEVPAVDSRAELCRKRAAHSNEEMHDCDSTLINGSPFRVSTGSGCLDENFE 645 Query: 291 YCVKIIRWLECEGHIEQEFRMKFLTWFSLRSTEQERMVVITYIQTLIDDPVSLAGQLVDS 112 YCVKIIRWLECEGHI QEFR+K LTWFSLRSTEQER VV T+IQTLIDDP SLAGQLVDS Sbjct: 646 YCVKIIRWLECEGHINQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDS 705 Query: 111 FLDIISGKRQRNGFCSKLWH 52 F DIIS KR RNGFCSKLWH Sbjct: 706 FSDIISSKRPRNGFCSKLWH 725 >ref|XP_002331732.1| predicted protein [Populus trichocarpa] gi|222874135|gb|EEF11266.1| predicted protein [Populus trichocarpa] Length = 612 Score = 199 bits (507), Expect = 1e-49 Identities = 98/140 (70%), Positives = 109/140 (77%), Gaps = 6/140 (4%) Frame = -2 Query: 453 SQTWLVRPIRELPAVD------RKRMSSTNEDTYDCDSVLMDASPLNRSSGSGRLDGSYE 292 SQTW+ P RE+P VD RKR + TNED +DCDS L++ SP SSGSG LD ++E Sbjct: 473 SQTWMHGPSREVPTVDSRSELCRKRAAHTNEDVHDCDSTLINESPFRVSSGSGYLDENFE 532 Query: 291 YCVKIIRWLECEGHIEQEFRMKFLTWFSLRSTEQERMVVITYIQTLIDDPVSLAGQLVDS 112 YCVK IRWLECEG+I QEFR+K LTWFSLRSTEQER VV T+IQTLIDDP SL GQLVDS Sbjct: 533 YCVKAIRWLECEGYINQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLGGQLVDS 592 Query: 111 FLDIISGKRQRNGFCSKLWH 52 F DIIS KR RNGFC KLWH Sbjct: 593 FSDIISSKRPRNGFCGKLWH 612 >ref|XP_002324971.1| predicted protein [Populus trichocarpa] gi|222866405|gb|EEF03536.1| predicted protein [Populus trichocarpa] Length = 717 Score = 199 bits (506), Expect = 2e-49 Identities = 98/140 (70%), Positives = 109/140 (77%), Gaps = 6/140 (4%) Frame = -2 Query: 453 SQTWLVRPIRELPAVD------RKRMSSTNEDTYDCDSVLMDASPLNRSSGSGRLDGSYE 292 SQTW+ P E+P VD RKR + NED +DCDS L++ SP + SSGSG LD ++E Sbjct: 578 SQTWMHGPSGEVPTVDSRSELCRKRAAHANEDLHDCDSTLINGSPFHVSSGSGYLDENFE 637 Query: 291 YCVKIIRWLECEGHIEQEFRMKFLTWFSLRSTEQERMVVITYIQTLIDDPVSLAGQLVDS 112 YCVK IRWLECEGHI QEFR+K LTWFSLRSTEQER VV T+IQTLIDDP SLAGQLVDS Sbjct: 638 YCVKTIRWLECEGHINQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDS 697 Query: 111 FLDIISGKRQRNGFCSKLWH 52 F DIIS KR RNGFC KLWH Sbjct: 698 FSDIISSKRPRNGFCGKLWH 717 >ref|XP_002281934.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis vinifera] Length = 646 Score = 192 bits (489), Expect = 2e-47 Identities = 95/140 (67%), Positives = 109/140 (77%), Gaps = 6/140 (4%) Frame = -2 Query: 453 SQTWLVRPIRELPAVD------RKRMSSTNEDTYDCDSVLMDASPLNRSSGSGRLDGSYE 292 SQT +R IRE+PAV+ RK+ S+ + YDC S L++ SPL +GSG LD SYE Sbjct: 507 SQTCKIRAIREVPAVESRTELCRKQTLSSKSEAYDCVSTLINGSPLQVCAGSGHLDRSYE 566 Query: 291 YCVKIIRWLECEGHIEQEFRMKFLTWFSLRSTEQERMVVITYIQTLIDDPVSLAGQLVDS 112 YCVKIIRWLECEGHI QEFRMKFLTWFSLRSTEQER VV +IQTLI+DP SLAGQL+DS Sbjct: 567 YCVKIIRWLECEGHIGQEFRMKFLTWFSLRSTEQERRVVHAFIQTLIEDPSSLAGQLIDS 626 Query: 111 FLDIISGKRQRNGFCSKLWH 52 F DI+ KR RNGFCS+LWH Sbjct: 627 FSDIVKSKRTRNGFCSELWH 646