BLASTX nr result

ID: Coptis25_contig00026242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026242
         (1064 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20077.3| unnamed protein product [Vitis vinifera]              163   6e-38
emb|CAN76591.1| hypothetical protein VITISV_020293 [Vitis vinifera]   150   4e-34
emb|CAN75698.1| hypothetical protein VITISV_035985 [Vitis vinifera]   150   5e-34
emb|CAN69184.1| hypothetical protein VITISV_004341 [Vitis vinifera]   147   3e-33
emb|CAN71862.1| hypothetical protein VITISV_003938 [Vitis vinifera]   138   4e-32

>emb|CBI20077.3| unnamed protein product [Vitis vinifera]
          Length = 1050

 Score =  163 bits (413), Expect = 6e-38
 Identities = 77/179 (43%), Positives = 118/179 (65%)
 Frame = +2

Query: 359  EIGVYNPVSVDNPSLQITTVRLDGKNFLIWAQSARMYIAGRGKYGYLIGDPKEPTSSDKS 538
            ++   NP S++NP+LQIT  +L+G NFL W+QS +++I  +GK GYLIG  K P   D  
Sbjct: 568  QVPTTNPGSIENPTLQITIHKLNGCNFLKWSQSVKLFIRVKGKLGYLIGANKAPKPEDHV 627

Query: 539  YPKWFSENSLVMSWLVHSMQPNIAVGYMFMRTAKEIWDSVHNTYSQCQNNARSFQLGTEI 718
            Y  W SENS+VM+WL++SM+  I   Y+F+ TAK++WD V  TYS   N  + F++ T++
Sbjct: 628  YQTWDSENSMVMAWLINSMETAIGQTYLFLPTAKDLWDEVQETYSDLGNATQMFEIKTKL 687

Query: 719  IDLKQGDLSLSEYYAKLRAIWKEMNHYESFLPWKDIEDARLYATLIDKQRVFQFLMGIH 895
             D+KQG  S+++YY  L   W+E++ + S + WK  ED   Y  +++K+R F FL G++
Sbjct: 688  KDIKQGSHSVTQYYNILPNAWQELDLF-SNMEWKCAEDNAHYCKILEKERAFDFLAGLN 745


>emb|CAN76591.1| hypothetical protein VITISV_020293 [Vitis vinifera]
          Length = 1416

 Score =  150 bits (380), Expect = 4e-34
 Identities = 67/174 (38%), Positives = 119/174 (68%)
 Frame = +2

Query: 377 PVSVDNPSLQITTVRLDGKNFLIWAQSARMYIAGRGKYGYLIGDPKEPTSSDKSYPKWFS 556
           P + ++ S+QITT+RL+G NFL W+QS  MYI GRGK GYL G+ K P   D +Y  W +
Sbjct: 355 PTTSESHSVQITTIRLNGDNFLRWSQSVWMYIRGRGKMGYLTGEKKAPVVDDPNYAIWDA 414

Query: 557 ENSLVMSWLVHSMQPNIAVGYMFMRTAKEIWDSVHNTYSQCQNNARSFQLGTEIIDLKQG 736
           ENS+VM+WLV+SM+ +I+  YM   T +++W++V+  YS   N ++ F+L  ++ +++Q 
Sbjct: 415 ENSMVMTWLVNSMEEDISSNYMCYPTTQKLWENVNQMYSDLGNQSQIFELTFKLGEIRQR 474

Query: 737 DLSLSEYYAKLRAIWKEMNHYESFLPWKDIEDARLYATLIDKQRVFQFLMGIHM 898
           + ++ +Y+  L+ IW++++ + ++  WK  ED R +   ++  R+F+FL+G+++
Sbjct: 475 EDNVIKYFNSLKQIWQDLDLFNTY-EWKSAEDGRHHKKTMEDNRIFKFLVGLNV 527


>emb|CAN75698.1| hypothetical protein VITISV_035985 [Vitis vinifera]
          Length = 1105

 Score =  150 bits (379), Expect = 5e-34
 Identities = 68/175 (38%), Positives = 117/175 (66%)
 Frame = +2

Query: 374 NPVSVDNPSLQITTVRLDGKNFLIWAQSARMYIAGRGKYGYLIGDPKEPTSSDKSYPKWF 553
           NP +  + S+QITT+RL+G NFL W+QS RMYI GRGK GYL  + K P   D +Y  W 
Sbjct: 28  NPTTSKSHSIQITTIRLNGDNFLRWSQSVRMYIRGRGKMGYLTREKKAPAVDDPNYAIWD 87

Query: 554 SENSLVMSWLVHSMQPNIAVGYMFMRTAKEIWDSVHNTYSQCQNNARSFQLGTEIIDLKQ 733
           +ENS+VMSWLV+SM+ +I+  YM    A+E+W++V+  YS   N ++ F+L  ++  ++Q
Sbjct: 88  AENSMVMSWLVNSMEEDISSNYMCYPIAQELWENVNQMYSNLGNQSQIFELTLKLGKIQQ 147

Query: 734 GDLSLSEYYAKLRAIWKEMNHYESFLPWKDIEDARLYATLIDKQRVFQFLMGIHM 898
           G+ ++++Y+   + IW++++ + ++  WK  ED   +   ++  ++F+FL G+++
Sbjct: 148 GEDNITKYFNSSKRIWQDLDLFNTY-EWKSTEDGLHHKKTMEDNQIFKFLAGLNV 201


>emb|CAN69184.1| hypothetical protein VITISV_004341 [Vitis vinifera]
          Length = 1360

 Score =  147 bits (372), Expect = 3e-33
 Identities = 71/171 (41%), Positives = 108/171 (63%)
 Frame = +2

Query: 383 SVDNPSLQITTVRLDGKNFLIWAQSARMYIAGRGKYGYLIGDPKEPTSSDKSYPKWFSEN 562
           + D   L IT  +L+G+NF+ WAQS  ++I G+GK  YL G   +P   D  Y  W  EN
Sbjct: 26  TTDGIILPITGHKLNGQNFIXWAQSVXIFICGKGKEEYLTGAIVQPKEDDPGYRTWKLEN 85

Query: 563 SLVMSWLVHSMQPNIAVGYMFMRTAKEIWDSVHNTYSQCQNNARSFQLGTEIIDLKQGDL 742
           S+VMSWL++SM  +I   +M+  TAKEIWD+   TYS   N +  F + + + DL+QGD 
Sbjct: 86  SMVMSWLINSMTNDIGENFMYYGTAKEIWDAARETYSNIDNTSAIFXIKSILQDLRQGDS 145

Query: 743 SLSEYYAKLRAIWKEMNHYESFLPWKDIEDARLYATLIDKQRVFQFLMGIH 895
           + +EY+  L   W++++ YE  L WK  ED  LY  +I+K+R+++FL+G++
Sbjct: 146 TXTEYFNILTRYWQQLDIYEE-LVWKCPEDGLLYKKVIEKERIYKFLLGLN 195


>emb|CAN71862.1| hypothetical protein VITISV_003938 [Vitis vinifera]
          Length = 984

 Score =  138 bits (348), Expect(2) = 4e-32
 Identities = 69/181 (38%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
 Frame = +2

Query: 380 VSVDNPSLQITTVRLDGKNFLIWAQSARMYIAGRGKYGYLIGDPKEPTSSDKSYPKWFSE 559
           +S+DNP+LQITT +L+GK FL W+   ++++  + K GY++G  K P +++  +  W SE
Sbjct: 141 LSLDNPTLQITTEKLNGKKFLEWSHFEKLFLRIKKKMGYILGMIKAPKTTNPLFELWDSE 200

Query: 560 NSLVMSWLVHSMQPNIAVGYMFMRTAKEIWDSVHNTYSQCQNNARSFQLGTEIIDLKQGD 739
           NS++MSWL++S+QP I   ++F+ TAK+IWD+V   YS+  N  R F+L   I + KQ  
Sbjct: 201 NSMIMSWLLNSIQPEIGKPFLFLSTAKDIWDAVVKAYSKKGNATRIFELKGAIHETKQQG 260

Query: 740 LSLSEYYAKLRAIWKEMNHYESFLPWKDIEDARLYATLI---DKQRVFQFLMGIHMRTLR 910
           L++  Y+ KL+ +W+E++ ++ +    +IE  R  A L+   +++R+F+FL G+   T  
Sbjct: 261 LNVLSYFNKLKILWEELDVHQHW----EIESPRDAAKLVEIPERERIFEFLAGLRPYTQS 316

Query: 911 S 913
           S
Sbjct: 317 S 317



 Score = 26.9 bits (58), Expect(2) = 4e-32
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +1

Query: 892  THEDIEKFQKFFSQMDNAAPTPTSTFAQTG-TFASANTVTNSRSPVWIIDSGASDSMT 1062
            T + +E   K   + +    T +  FAQ+G T    +  +  ++  WI++SGASD MT
Sbjct: 330  TKDQLELLYKLLGKTEVTLST-SCAFAQSGITEPVMHMKSVLKNVPWIVNSGASDHMT 386


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