BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026236
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   145   2e-34
gb|AAB61236.1| chlorophyll a/b-binding protein [Mesembryanthemum...   146   5e-34
sp|P92919.1|CB23_APIGR RecName: Full=Chlorophyll a-b binding pro...   142   5e-34
gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]      147   7e-34
gb|AFK40061.1| unknown [Medicago truncatula]                          147   7e-34

>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  145 bits (367), Expect(2) = 2e-34
 Identities = 73/99 (73%), Positives = 76/99 (76%), Gaps = 3/99 (3%)
 Frame = -1

Query: 288 QSRITMRXXXXXXXXXXXXSP*YGPDRVKYLGPFSGASPSYLTGEFPGDYGWDTAGLSAD 109
           + R+TMR            SP YGPDRVKYLGPFSG  PSYLTGEFPGDYGWDTAGLSAD
Sbjct: 30  EGRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSAD 89

Query: 108 QETFAKNHELEVIHSRWAMLGAFGCVFPELV---*VKFG 1
            ETFAKN ELEVIHSRWAMLGA GCVFPEL+    VKFG
Sbjct: 90  PETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG 128



 Score = 25.0 bits (53), Expect(2) = 2e-34
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = -3

Query: 355 ASQVALEAHAGVGKSLKLAPSNSE 284
           AS +AL + +  G+++KLAPS+S+
Sbjct: 3   ASTMALSSPSLAGQAIKLAPSSSD 26


>gb|AAB61236.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
          Length = 267

 Score =  146 bits (368), Expect(2) = 5e-34
 Identities = 74/99 (74%), Positives = 76/99 (76%), Gaps = 3/99 (3%)
 Frame = -1

Query: 288 QSRITMRXXXXXXXXXXXXSP*YGPDRVKYLGPFSGASPSYLTGEFPGDYGWDTAGLSAD 109
           + RITMR            SP YGPDRVKYLGPFSG SPSYLTGEFPGDYGWDTAGLSAD
Sbjct: 30  EGRITMRKAAGKSKVATIDSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSAD 89

Query: 108 QETFAKNHELEVIHSRWAMLGAFGCVFPELV---*VKFG 1
            ETFAKN ELEVIH RWAMLGA GCVFPEL+    VKFG
Sbjct: 90  PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 128



 Score = 23.1 bits (48), Expect(2) = 5e-34
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -3

Query: 355 ASQVALEAHAGVGKSLKLAPSNSE 284
           +S +AL + +  GK++KL+P+ SE
Sbjct: 3   SSTMALSSPSFAGKAVKLSPTASE 26


>sp|P92919.1|CB23_APIGR RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
           AltName: Allergen=Api g 3; Flags: Precursor
           gi|1769849|emb|CAA99993.1| chlorophyll a/b binding
           protein [Apium graveolens]
          Length = 264

 Score =  142 bits (357), Expect(2) = 5e-34
 Identities = 68/79 (86%), Positives = 70/79 (88%), Gaps = 3/79 (3%)
 Frame = -1

Query: 228 P*YGPDRVKYLGPFSGASPSYLTGEFPGDYGWDTAGLSADQETFAKNHELEVIHSRWAML 49
           P YGPDRVKYLGPFSG +PSYLTGEFPGDYGWDTAGLSAD ETFAKN ELEVIHSRWAML
Sbjct: 47  PWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 106

Query: 48  GAFGCVFPELV---*VKFG 1
           GA GCVFPEL+    VKFG
Sbjct: 107 GALGCVFPELLARNGVKFG 125



 Score = 27.3 bits (59), Expect(2) = 5e-34
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = -3

Query: 355 ASQVALEAHAGVGKSLKLAPSNSE 284
           AS +AL + A  GK++K+APS+SE
Sbjct: 3   ASTMALSSPALAGKAVKVAPSSSE 26


>gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]
          Length = 266

 Score =  147 bits (372), Expect = 7e-34
 Identities = 80/117 (68%), Positives = 82/117 (70%), Gaps = 3/117 (2%)
 Frame = -1

Query: 342 PSKLTPE*GNP*SSLHPTQSRITMRXXXXXXXXXXXXSP*YGPDRVKYLGPFSGASPSYL 163
           P KLTP      SS     +R TMR            SP YGPDRVKYLGPFSG  PSYL
Sbjct: 17  PVKLTP------SSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYL 70

Query: 162 TGEFPGDYGWDTAGLSADQETFAKNHELEVIHSRWAMLGAFGCVFPELV---*VKFG 1
           TGEFPGDYGWDTAGLSAD ETFAKN ELEVIHSRWAMLGA GCVFPEL+    VKFG
Sbjct: 71  TGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG 127


>gb|AFK40061.1| unknown [Medicago truncatula]
          Length = 266

 Score =  147 bits (372), Expect = 7e-34
 Identities = 80/117 (68%), Positives = 82/117 (70%), Gaps = 3/117 (2%)
 Frame = -1

Query: 342 PSKLTPE*GNP*SSLHPTQSRITMRXXXXXXXXXXXXSP*YGPDRVKYLGPFSGASPSYL 163
           P KLTP      SS     +R TMR            SP YGPDRVKYLGPFSG  PSYL
Sbjct: 17  PVKLTP------SSQELGAARFTMRKAATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYL 70

Query: 162 TGEFPGDYGWDTAGLSADQETFAKNHELEVIHSRWAMLGAFGCVFPELV---*VKFG 1
           TGEFPGDYGWDTAGLSAD ETFAKN ELEVIHSRWAMLGA GCVFPEL+    VKFG
Sbjct: 71  TGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG 127