BLASTX nr result

ID: Coptis25_contig00026231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026231
         (794 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278506.1| PREDICTED: uncharacterized protein LOC100267...    87   3e-15
emb|CAN83757.1| hypothetical protein VITISV_028373 [Vitis vinifera]    87   4e-15
ref|XP_004136199.1| PREDICTED: uncharacterized protein LOC101212...    77   4e-12
ref|XP_004171564.1| PREDICTED: uncharacterized LOC101212292 [Cuc...    75   2e-11
ref|XP_002304352.1| predicted protein [Populus trichocarpa] gi|1...    73   8e-11

>ref|XP_002278506.1| PREDICTED: uncharacterized protein LOC100267682 [Vitis vinifera]
          Length = 147

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 65/153 (42%), Positives = 76/153 (49%), Gaps = 29/153 (18%)
 Frame = +1

Query: 88  MQRQSLSSPGSKLNIH-------------EENDXXXXXXXXXXXXXXXXLITYNHSTKFR 228
           MQRQSL SP SKL+IH              E D                 +    S+   
Sbjct: 1   MQRQSLGSPSSKLHIHGGGGGGAKEEILKAEKDLNQSQNDDEADHKSLKPL---RSSSSP 57

Query: 229 ADKSIHLIPLLTVFCFLILYLVSHDPLQQELVHINGFKR-------PNLVLETE----KS 375
            DK IHLIPLL +FCFL+LYL SHDP   EL   +GFK+        N + + E    KS
Sbjct: 58  PDKLIHLIPLLMLFCFLLLYLFSHDPSHSELAQFDGFKKRSSKLTDSNEIADLERFVVKS 117

Query: 376 DVLAIRSYRSLQEI-----KKRGLILHRKMGDF 459
           DV +IRS R+LQEI     K R   LHRKMGDF
Sbjct: 118 DVFSIRSLRNLQEIGTYAPKSR---LHRKMGDF 147


>emb|CAN83757.1| hypothetical protein VITISV_028373 [Vitis vinifera]
          Length = 150

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 64/153 (41%), Positives = 75/153 (49%), Gaps = 29/153 (18%)
 Frame = +1

Query: 88  MQRQSLSSPGSKLNIHEENDXXXXXXXXXXXXXXXXLITYNH-------------STKFR 228
           MQRQSL SP SKL+IH                    L    +             S+   
Sbjct: 1   MQRQSLGSPSSKLHIHGGGGGGGGGAKEEILKAEKDLNQSQNDDEADHKSLKPLRSSSSP 60

Query: 229 ADKSIHLIPLLTVFCFLILYLVSHDPLQQELVHINGFKR-------PNLVLETE----KS 375
            DK IHLIPLL +FCFL+LYL SHDP   EL   +GFK+        N + + E    KS
Sbjct: 61  PDKLIHLIPLLMLFCFLLLYLFSHDPSHSELAQFDGFKKRSSKLTDSNEIADLERFVVKS 120

Query: 376 DVLAIRSYRSLQEI-----KKRGLILHRKMGDF 459
           DV +IRS R+LQEI     K R   LHRKMGDF
Sbjct: 121 DVFSIRSLRNLQEIGTYAPKSR---LHRKMGDF 150


>ref|XP_004136199.1| PREDICTED: uncharacterized protein LOC101212292 [Cucumis sativus]
          Length = 158

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 34/158 (21%)
 Frame = +1

Query: 88  MQRQSLSSPGSKLNIH-----EENDXXXXXXXXXXXXXXXXLITY--------NHSTKF- 225
           MQRQSL SP SKL+ H      + D                ++ Y        + S +F 
Sbjct: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60

Query: 226 -------RADKSIHLIPLLTVFCFLILYLVSHDPLQQELVHINGFKRPNLVLE------- 363
                  R +K +H IP+LT+ CFLILY+ SH P Q +L   +GFK P+  LE       
Sbjct: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLEIKADGDE 120

Query: 364 ---TEKSDVLAIRSYRSLQEIKKRGLILH---RKMGDF 459
               +K ++LAI+S+R+L+EI+K   +     RK+ DF
Sbjct: 121 LILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF 158


>ref|XP_004171564.1| PREDICTED: uncharacterized LOC101212292 [Cucumis sativus]
          Length = 159

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 54/159 (33%), Positives = 77/159 (48%), Gaps = 35/159 (22%)
 Frame = +1

Query: 88  MQRQSLSSPGSKLNIH-----EENDXXXXXXXXXXXXXXXXLITY--------NHSTKF- 225
           MQRQSL SP SKL+ H      + D                ++ Y        + S +F 
Sbjct: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60

Query: 226 -------RADKSIHLIPLLTVFCFLILYLVSHDPLQQELVHINGFKRPNLVLETEKSD-- 378
                  R +K +H IP+LT+ CFLILY+ SH P Q +L   +GFK P+  L   K+D  
Sbjct: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLAEIKADGD 120

Query: 379 ---------VLAIRSYRSLQEIKKRGLILH---RKMGDF 459
                    +LAI+S+R+L+EI+K   +     RK+ DF
Sbjct: 121 ELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF 159


>ref|XP_002304352.1| predicted protein [Populus trichocarpa] gi|118484537|gb|ABK94143.1|
           unknown [Populus trichocarpa]
           gi|222841784|gb|EEE79331.1| predicted protein [Populus
           trichocarpa]
          Length = 170

 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 43/95 (45%), Positives = 56/95 (58%), Gaps = 19/95 (20%)
 Frame = +1

Query: 232 DKSIHLIPLLTVFCFLILYLVSHDPLQQELVHINGFKRPNLVLE--------------TE 369
           +K IHLIP LT+FCFL+L+LVSH+P Q +L   NGFKR +  +E                
Sbjct: 76  EKLIHLIPFLTLFCFLVLFLVSHNPSQADLAQFNGFKRVSNHIEEAIESVGDVSGLSAVR 135

Query: 370 KSDVLAIRSYRSLQEI--KKRGLI---LHRKMGDF 459
           + DVLA+RS+R+LQEI   KR  +    HRK   F
Sbjct: 136 RGDVLAVRSFRNLQEIAADKRAPLKVRSHRKFAHF 170


Top