BLASTX nr result

ID: Coptis25_contig00026229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026229
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]   103   2e-20
ref|XP_002324850.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_002329350.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_002329355.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_002319926.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16

>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score =  103 bits (257), Expect = 2e-20
 Identities = 50/97 (51%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
 Frame = +1

Query: 1   ITSYVILLDSLINTQNDVKLLRSKGIIDGLFHEDEKVAVAINNLFKGAIV--DKFFYDGL 174
           IT YVIL++ LIN+  DV LL   GII+ L  ++E V+     L K  +   DKF +  L
Sbjct: 320 ITDYVILMEYLINSPKDVALLSRYGIINNLLGDNEGVSHLFKKLGKEVVFNSDKFQFSNL 379

Query: 175 CNRINAYYRTSWHKWRATLKRDYFNTPWAILSFVGAV 285
           C  +N Y++T WH WRATL+RDYFN PWAI+SF+GAV
Sbjct: 380 CRDVNKYHKTRWHIWRATLRRDYFNNPWAIISFIGAV 416


>ref|XP_002324850.1| predicted protein [Populus trichocarpa] gi|222866284|gb|EEF03415.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/97 (46%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
 Frame = +1

Query: 1   ITSYVILLDSLINTQNDVKLLRSKGIIDGLFHEDEKVAVAINNLFKGA--IVDKFFYDGL 174
           I  YVI+++ L+NT  DV+LL   GI++    +DE ++   + L K    IVD F++ GL
Sbjct: 297 INDYVIIINHLVNTAKDVELLVKDGIVENWLWDDEGMSALFHGLVKETFVIVDHFYFSGL 356

Query: 175 CNRINAYYRTSWHKWRATLKRDYFNTPWAILSFVGAV 285
              +NAY R  WHKW+ATLK+ YFN PW+I+SF+ AV
Sbjct: 357 VEELNAYCRKPWHKWQATLKQHYFNNPWSIISFIAAV 393


>ref|XP_002329350.1| predicted protein [Populus trichocarpa] gi|222870400|gb|EEF07531.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 41/95 (43%), Positives = 63/95 (66%)
 Frame = +1

Query: 1   ITSYVILLDSLINTQNDVKLLRSKGIIDGLFHEDEKVAVAINNLFKGAIVDKFFYDGLCN 180
           +TSY + +D L++T +DV+LL  K II       E V    NN+ K  +V +F++  LC 
Sbjct: 160 MTSYALFMDRLVDTSSDVELLAKKRIIQNDLGGYEDVTDLFNNICKQVVVREFYFTQLCE 219

Query: 181 RINAYYRTSWHKWRATLKRDYFNTPWAILSFVGAV 285
           +++AYY  SWH ++A+LK+DYF  PWAI+SF+ A+
Sbjct: 220 QVDAYYNKSWHGYKASLKQDYFKNPWAIISFIAAI 254


>ref|XP_002329355.1| predicted protein [Populus trichocarpa] gi|222870405|gb|EEF07536.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 41/95 (43%), Positives = 62/95 (65%)
 Frame = +1

Query: 1   ITSYVILLDSLINTQNDVKLLRSKGIIDGLFHEDEKVAVAINNLFKGAIVDKFFYDGLCN 180
           +TSY +L+D L++T +DV+LL  K II       E V    NN+ K  +V +F +  LC 
Sbjct: 319 MTSYALLMDRLVDTSSDVELLAKKRIIQNDLGGYEDVTDLFNNICKQVVVREFNFTQLCE 378

Query: 181 RINAYYRTSWHKWRATLKRDYFNTPWAILSFVGAV 285
           +++AYY  SWH ++A+LK+DYF  PW I+SF+ A+
Sbjct: 379 QVDAYYNKSWHGYKASLKQDYFKNPWTIISFIAAI 413


>ref|XP_002319926.1| predicted protein [Populus trichocarpa] gi|222858302|gb|EEE95849.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/92 (44%), Positives = 60/92 (65%)
 Frame = +1

Query: 1   ITSYVILLDSLINTQNDVKLLRSKGIIDGLFHEDEKVAVAINNLFKGAIVDKFFYDGLCN 180
           ITSY +L+D LI+T NDV+LL  K II+  F   E V+   N++ K  ++  F+Y GLC 
Sbjct: 316 ITSYFLLMDRLIDTPNDVELLVQKRIIENDFGGWEDVSAFFNSICKQIVLQDFYYAGLCE 375

Query: 181 RINAYYRTSWHKWRATLKRDYFNTPWAILSFV 276
            +NAYY   W++++A  +RD+   PWAI+S V
Sbjct: 376 DVNAYYNKQWYRYKADFRRDHCKNPWAIISLV 407


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