BLASTX nr result

ID: Coptis25_contig00026227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026227
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532959.1| potassium channel tetramerization domain-con...   457   e-126
ref|XP_002878736.1| potassium channel tetramerization domain-con...   457   e-126
ref|NP_180001.1| BTB/POZ domain with WD40/YVTN repeat-containing...   457   e-126
ref|XP_002309344.1| predicted protein [Populus trichocarpa] gi|2...   456   e-126
ref|XP_002324540.1| predicted protein [Populus trichocarpa] gi|2...   453   e-125

>ref|XP_002532959.1| potassium channel tetramerization domain-containing protein,
           putative [Ricinus communis] gi|223527269|gb|EEF29425.1|
           potassium channel tetramerization domain-containing
           protein, putative [Ricinus communis]
          Length = 444

 Score =  457 bits (1177), Expect = e-126
 Identities = 214/244 (87%), Positives = 227/244 (93%)
 Frame = +1

Query: 1   LRYKFHVSHESQVKSFTAGALSFSPDYKIFASCKGRSNEYGIGVWDQVTGKQIDFFYESP 180
           LRYKF V HE+Q KS+TAGALS S DY+IF SCKGRSNEYGIGVWDQ+TGKQIDFFYESP
Sbjct: 201 LRYKFQVCHENQFKSYTAGALSTSSDYRIFTSCKGRSNEYGIGVWDQITGKQIDFFYESP 260

Query: 181 GWSLGDADRLQWLNGTNCLLVATLFPRKDNCYISLLDFREKRMVWYWSDIGAPIIIDEKR 360
           GWSLGDAD+LQWLNG+NCLLVATLFPRKDNCYISLLDFREKRMVW WSDIGAPI +DEKR
Sbjct: 261 GWSLGDADKLQWLNGSNCLLVATLFPRKDNCYISLLDFREKRMVWSWSDIGAPITVDEKR 320

Query: 361 VRDAIAMEETNSICVVNEYEDLGFMDLRSTVGSVRWSSRSRLMAGKMPDEPCYPKLALHE 540
           VRDAIAME+ NSICVVNEYEDLGFMDLR + GSVRWSSRSRLM GKMPDEPCYPKLALHE
Sbjct: 321 VRDAIAMEDCNSICVVNEYEDLGFMDLRISGGSVRWSSRSRLMKGKMPDEPCYPKLALHE 380

Query: 541 GQLFSSMNDSISVFSGPDWALTSRLRRGYGGSICDFSIGGDRLFALHSEENVFDIWETPP 720
           GQLFSSM+D IS+F GPDW LTSRLRR YGGSICDFSIGGDRLFALHSEENVFD+WET P
Sbjct: 381 GQLFSSMDDCISMFCGPDWVLTSRLRRSYGGSICDFSIGGDRLFALHSEENVFDVWETTP 440

Query: 721 PPIM 732
           PPI+
Sbjct: 441 PPII 444


>ref|XP_002878736.1| potassium channel tetramerization domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297324575|gb|EFH54995.1| potassium channel
           tetramerization domain-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 440

 Score =  457 bits (1175), Expect = e-126
 Identities = 213/244 (87%), Positives = 228/244 (93%)
 Frame = +1

Query: 1   LRYKFHVSHESQVKSFTAGALSFSPDYKIFASCKGRSNEYGIGVWDQVTGKQIDFFYESP 180
           LRYKF V HE+QVKS+TAGALSFSPDY+IFASCKGRSNEYGIGVWDQ+TGKQ DFFYESP
Sbjct: 197 LRYKFQVCHENQVKSYTAGALSFSPDYEIFASCKGRSNEYGIGVWDQITGKQTDFFYESP 256

Query: 181 GWSLGDADRLQWLNGTNCLLVATLFPRKDNCYISLLDFREKRMVWYWSDIGAPIIIDEKR 360
           GWSLGDAD+LQWLNG NCLLVATLFPRKDNCYISLLDFR+K MVW WSDIG+P+ IDEKR
Sbjct: 257 GWSLGDADKLQWLNGKNCLLVATLFPRKDNCYISLLDFRDKNMVWSWSDIGSPMAIDEKR 316

Query: 361 VRDAIAMEETNSICVVNEYEDLGFMDLRSTVGSVRWSSRSRLMAGKMPDEPCYPKLALHE 540
           VRDAIAME++NSICVVNE+EDLGF+DLR   GSVRWSSRS+LM  KMPDEPCYPKLALHE
Sbjct: 317 VRDAIAMEDSNSICVVNEFEDLGFIDLRMYGGSVRWSSRSKLMKSKMPDEPCYPKLALHE 376

Query: 541 GQLFSSMNDSISVFSGPDWALTSRLRRGYGGSICDFSIGGDRLFALHSEENVFDIWETPP 720
           GQLFSSMNDSISVF GPDW LTSRLRR YGGSICDFSIGGDRLFALHSEENVFD+WETPP
Sbjct: 377 GQLFSSMNDSISVFCGPDWVLTSRLRRSYGGSICDFSIGGDRLFALHSEENVFDVWETPP 436

Query: 721 PPIM 732
            PI+
Sbjct: 437 CPII 440


>ref|NP_180001.1| BTB/POZ domain with WD40/YVTN repeat-containing protein
           [Arabidopsis thaliana]
           gi|75216782|sp|Q9ZUH1.1|Y2424_ARATH RecName:
           Full=BTB/POZ domain-containing protein At2g24240
           gi|4115384|gb|AAD03385.1| unknown protein [Arabidopsis
           thaliana] gi|56236038|gb|AAV84475.1| At2g24240
           [Arabidopsis thaliana] gi|56790194|gb|AAW30014.1|
           At2g24240 [Arabidopsis thaliana]
           gi|110738282|dbj|BAF01070.1| hypothetical protein
           [Arabidopsis thaliana] gi|330252453|gb|AEC07547.1|
           BTB/POZ domain with WD40/YVTN repeat-containing protein
           [Arabidopsis thaliana]
          Length = 441

 Score =  457 bits (1175), Expect = e-126
 Identities = 213/244 (87%), Positives = 228/244 (93%)
 Frame = +1

Query: 1   LRYKFHVSHESQVKSFTAGALSFSPDYKIFASCKGRSNEYGIGVWDQVTGKQIDFFYESP 180
           LRYKF V HE+QVKS+TAGALSFSPDY+IFASCKGRSNEYGIGVWDQ+TGKQ DFFYESP
Sbjct: 198 LRYKFQVCHENQVKSYTAGALSFSPDYEIFASCKGRSNEYGIGVWDQITGKQTDFFYESP 257

Query: 181 GWSLGDADRLQWLNGTNCLLVATLFPRKDNCYISLLDFREKRMVWYWSDIGAPIIIDEKR 360
           GWSLGDAD+LQWLNG NCLLVATLFPRKDNCYISLLDFR+K MVW WSDIG+P+ IDEKR
Sbjct: 258 GWSLGDADKLQWLNGKNCLLVATLFPRKDNCYISLLDFRDKNMVWSWSDIGSPMAIDEKR 317

Query: 361 VRDAIAMEETNSICVVNEYEDLGFMDLRSTVGSVRWSSRSRLMAGKMPDEPCYPKLALHE 540
           VRDAIAME++NSICVVNE+EDLGF+DLR   GSVRWSSRS+LM  KMPDEPCYPKLALHE
Sbjct: 318 VRDAIAMEDSNSICVVNEFEDLGFIDLRMYGGSVRWSSRSKLMKSKMPDEPCYPKLALHE 377

Query: 541 GQLFSSMNDSISVFSGPDWALTSRLRRGYGGSICDFSIGGDRLFALHSEENVFDIWETPP 720
           GQLFSSMNDSISVF GPDW LTSRLRR YGGSICDFSIGGDRLFALHSEENVFD+WETPP
Sbjct: 378 GQLFSSMNDSISVFCGPDWVLTSRLRRSYGGSICDFSIGGDRLFALHSEENVFDVWETPP 437

Query: 721 PPIM 732
            PI+
Sbjct: 438 CPII 441


>ref|XP_002309344.1| predicted protein [Populus trichocarpa] gi|222855320|gb|EEE92867.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score =  456 bits (1172), Expect = e-126
 Identities = 212/243 (87%), Positives = 226/243 (93%)
 Frame = +1

Query: 1   LRYKFHVSHESQVKSFTAGALSFSPDYKIFASCKGRSNEYGIGVWDQVTGKQIDFFYESP 180
           LRYKF V HE+QVKSFTAGALS S DYKIF+SCKGRSNEYGIGVWDQVTGKQIDFFYESP
Sbjct: 203 LRYKFQVCHENQVKSFTAGALSTSSDYKIFSSCKGRSNEYGIGVWDQVTGKQIDFFYESP 262

Query: 181 GWSLGDADRLQWLNGTNCLLVATLFPRKDNCYISLLDFREKRMVWYWSDIGAPIIIDEKR 360
           GWSLGDAD+LQWLNG+NCLLVATLFPRKDNCYIS+LDFR+KRMVW WSD GAPI +DEKR
Sbjct: 263 GWSLGDADKLQWLNGSNCLLVATLFPRKDNCYISMLDFRDKRMVWSWSDFGAPITVDEKR 322

Query: 361 VRDAIAMEETNSICVVNEYEDLGFMDLRSTVGSVRWSSRSRLMAGKMPDEPCYPKLALHE 540
           VRDAIAME+ N+ICVVNEYEDLGFMDLR   GSVRWSSRSR+M GK+ DEPCYPKLALHE
Sbjct: 323 VRDAIAMEDNNAICVVNEYEDLGFMDLRMNGGSVRWSSRSRMMKGKLSDEPCYPKLALHE 382

Query: 541 GQLFSSMNDSISVFSGPDWALTSRLRRGYGGSICDFSIGGDRLFALHSEENVFDIWETPP 720
           GQLFSSM+D ISVF GPDW LTSRLR+ YGGSICDFSIGGDRLFALHSEENVFD+WETPP
Sbjct: 383 GQLFSSMDDCISVFCGPDWVLTSRLRQSYGGSICDFSIGGDRLFALHSEENVFDVWETPP 442

Query: 721 PPI 729
           PPI
Sbjct: 443 PPI 445


>ref|XP_002324540.1| predicted protein [Populus trichocarpa] gi|222865974|gb|EEF03105.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score =  453 bits (1165), Expect = e-125
 Identities = 210/243 (86%), Positives = 226/243 (93%)
 Frame = +1

Query: 1   LRYKFHVSHESQVKSFTAGALSFSPDYKIFASCKGRSNEYGIGVWDQVTGKQIDFFYESP 180
           LRYKF V HE+QVKSFTAGALS S DYKIF+SCKGRSNEYG+GVWDQVTGKQIDF YESP
Sbjct: 203 LRYKFQVCHENQVKSFTAGALSTSSDYKIFSSCKGRSNEYGVGVWDQVTGKQIDFLYESP 262

Query: 181 GWSLGDADRLQWLNGTNCLLVATLFPRKDNCYISLLDFREKRMVWYWSDIGAPIIIDEKR 360
           GWSLGDAD+LQWLNG+NCLLVATLFPRKDNCYIS+LDFR+KRMVW WSD GAPI +DEKR
Sbjct: 263 GWSLGDADKLQWLNGSNCLLVATLFPRKDNCYISMLDFRDKRMVWSWSDFGAPITVDEKR 322

Query: 361 VRDAIAMEETNSICVVNEYEDLGFMDLRSTVGSVRWSSRSRLMAGKMPDEPCYPKLALHE 540
           VRDAIAME++N+ICVVNEYEDLGFMDLR   GSVRWSSRSR+M GK+ DEPCYPKLALH 
Sbjct: 323 VRDAIAMEDSNAICVVNEYEDLGFMDLRMNGGSVRWSSRSRMMKGKLSDEPCYPKLALHG 382

Query: 541 GQLFSSMNDSISVFSGPDWALTSRLRRGYGGSICDFSIGGDRLFALHSEENVFDIWETPP 720
           GQLFSSM+D ISVF GPDW LTSRLR+GYGGSICDFSIGGDRLFALHSEENVFD+WETPP
Sbjct: 383 GQLFSSMDDCISVFCGPDWVLTSRLRQGYGGSICDFSIGGDRLFALHSEENVFDVWETPP 442

Query: 721 PPI 729
           PPI
Sbjct: 443 PPI 445


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