BLASTX nr result

ID: Coptis25_contig00026225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026225
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29711.3| unnamed protein product [Vitis vinifera]              151   1e-34
ref|XP_002526458.1| conserved hypothetical protein [Ricinus comm...   147   2e-33
ref|XP_002869724.1| hypothetical protein ARALYDRAFT_492419 [Arab...   140   2e-31
ref|XP_002328775.1| predicted protein [Populus trichocarpa] gi|2...   140   2e-31
ref|XP_002331110.1| predicted protein [Populus trichocarpa] gi|2...   140   3e-31

>emb|CBI29711.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  151 bits (382), Expect = 1e-34
 Identities = 80/160 (50%), Positives = 100/160 (62%), Gaps = 7/160 (4%)
 Frame = +1

Query: 211 PSPSFP----QRAIXXXXXXXXXXXXXXPTGTVLAFQLLLPTFTNNGSCTSGSRXXXXXX 378
           PS S P    QRA+              PTGT+LAFQLL P FTNNG+C + +R      
Sbjct: 66  PSSSAPSTLRQRALSQTLASTANLANLLPTGTLLAFQLLTPVFTNNGACDAVTRFT---- 121

Query: 379 XXXXXXXXXXXXXXDSFKTQEGQVYYGLVTFKGMWLFDY---PGTVSSLPDLSKYRIRLI 549
                         DSFKT +G+V+YG+ TFKG+WLFDY    G+ +SLPDLSKY+ R I
Sbjct: 122 --------------DSFKTPDGRVFYGIATFKGLWLFDYVDESGSAASLPDLSKYKFRFI 167

Query: 550 DGVHAVLSVFIFVAIALRDANVLRCFYPNPEQETQDILSI 669
           DGVHAVLSV +FVA+A+RD NV+ CFYP P +E Q++L I
Sbjct: 168 DGVHAVLSVLVFVAVAMRDKNVVSCFYPQPAREVQEVLDI 207


>ref|XP_002526458.1| conserved hypothetical protein [Ricinus communis]
           gi|223534238|gb|EEF35953.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score =  147 bits (370), Expect = 2e-33
 Identities = 79/154 (51%), Positives = 97/154 (62%), Gaps = 2/154 (1%)
 Frame = +1

Query: 214 SPSFPQRAIXXXXXXXXXXXXXXPTGTVLAFQLLLPTFTNNGSCTSGSRXXXXXXXXXXX 393
           SPS  QRAI              PTGT+LAFQLL P FTNNG+C S +R           
Sbjct: 46  SPSLSQRAISQTLTSTANLANLLPTGTLLAFQLLTPIFTNNGACDSVTRPMTLCLLALLA 105

Query: 394 XXXXXXXXXDSFKTQEG-QVYYGLVTFKGMWLFDYPGTVSS-LPDLSKYRIRLIDGVHAV 567
                    DS K+ +G QVYYG+ TFKG++LFD P  V + L DLSKY+IR IDGVH+V
Sbjct: 106 ISCFLSSFTDSVKSSDGKQVYYGIATFKGIFLFDCPDPVGAGLKDLSKYKIRFIDGVHSV 165

Query: 568 LSVFIFVAIALRDANVLRCFYPNPEQETQDILSI 669
           LSV +F+A ALRD NV+ CFYP P+ ETQ++L+I
Sbjct: 166 LSVLVFIAFALRDKNVVSCFYPMPKHETQEVLNI 199


>ref|XP_002869724.1| hypothetical protein ARALYDRAFT_492419 [Arabidopsis lyrata subsp.
           lyrata] gi|297315560|gb|EFH45983.1| hypothetical protein
           ARALYDRAFT_492419 [Arabidopsis lyrata subsp. lyrata]
          Length = 213

 Score =  140 bits (354), Expect = 2e-31
 Identities = 70/130 (53%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
 Frame = +1

Query: 283 PTGTVLAFQLLLPTFTNNGSCTSGSRXXXXXXXXXXXXXXXXXXXXDSFKTQEGQVYYGL 462
           PTGT+LAF LL+P FT+NGSC   +R                    DS K ++G VYYG 
Sbjct: 50  PTGTLLAFTLLIPVFTSNGSCDYPTRVLTAGLLTLLSISCFLSSFTDSVKAEDGNVYYGF 109

Query: 463 VTFKGMWLFDYPGTVS-SLPDLSKYRIRLIDGVHAVLSVFIFVAIALRDANVLRCFYPNP 639
            T KGMW+FDYP      LPDLSKYRIR+ID +HAVLSV +F A+ALRD N + CFYP P
Sbjct: 110 ATRKGMWIFDYPDPDGLGLPDLSKYRIRIIDWIHAVLSVLVFGAVALRDKNAVSCFYPAP 169

Query: 640 EQETQDILSI 669
           EQET+ +L I
Sbjct: 170 EQETKKVLDI 179


>ref|XP_002328775.1| predicted protein [Populus trichocarpa] gi|222839073|gb|EEE77424.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score =  140 bits (354), Expect = 2e-31
 Identities = 79/166 (47%), Positives = 102/166 (61%), Gaps = 4/166 (2%)
 Frame = +1

Query: 184 NVQIQTTTIPS--PSFPQRAIXXXXXXXXXXXXXXPTGTVLAFQLLLPTFTNNGSCTSGS 357
           NVQ +T   PS  P+  QRAI              PTGT+LAFQLL P FTNNG+C S +
Sbjct: 34  NVQPETPKSPSRPPTLSQRAISQTLTSTANLANLLPTGTLLAFQLLTPFFTNNGACDSAT 93

Query: 358 RXXXXXXXXXXXXXXXXXXXXDSFKTQ-EGQVYYGLVTFKGMWLFDYPGTVSS-LPDLSK 531
           R                    DS ++  +G+VYYGL +FKGM+LFD P   +S L DLSK
Sbjct: 94  RPMTLILLALLALSCFLASFTDSVRSPTDGRVYYGLASFKGMYLFDCPDPAASGLVDLSK 153

Query: 532 YRIRLIDGVHAVLSVFIFVAIALRDANVLRCFYPNPEQETQDILSI 669
           +++  ID VHAVLSV +F+++ALR+ NVL CFYP P+ ETQ++LSI
Sbjct: 154 FKMGFIDVVHAVLSVLVFISVALREKNVLSCFYPMPKHETQEVLSI 199


>ref|XP_002331110.1| predicted protein [Populus trichocarpa] gi|222872838|gb|EEF09969.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  140 bits (352), Expect = 3e-31
 Identities = 79/162 (48%), Positives = 96/162 (59%), Gaps = 4/162 (2%)
 Frame = +1

Query: 196 QTTTIPS--PSFPQRAIXXXXXXXXXXXXXXPTGTVLAFQLLLPTFTNNGSCTSGSRXXX 369
           +T   PS  P+F QRAI              PTGT+LAFQ+L P FTNNG+C S +    
Sbjct: 41  ETPKSPSRPPTFSQRAISQTLTSTANLANLLPTGTLLAFQILTPIFTNNGACDSATAPMT 100

Query: 370 XXXXXXXXXXXXXXXXXDSFKTQ-EGQVYYGLVTFKGMWLFDYPGTVSS-LPDLSKYRIR 543
                            DS K+  +GQVYYG  T KGM+LFD P  V S L DLSK ++R
Sbjct: 101 SVLLALLAVSCFLGSFTDSVKSPTDGQVYYGFATLKGMFLFDCPDPVGSGLSDLSKLKLR 160

Query: 544 LIDGVHAVLSVFIFVAIALRDANVLRCFYPNPEQETQDILSI 669
            ID VHAVLSV +FVA+ALRD NVL CFYP P+ ETQ++L +
Sbjct: 161 FIDVVHAVLSVLVFVAVALRDKNVLSCFYPMPKHETQEVLDV 202


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