BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026223
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containi...   375   e-105
emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]   375   e-105
ref|XP_002315827.1| predicted protein [Populus trichocarpa] gi|2...   372   e-103
ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containi...   360   6e-99
ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containi...   360   2e-98

>ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Vitis vinifera]
          Length = 709

 Score =  375 bits (964), Expect(2) = e-105
 Identities = 178/223 (79%), Positives = 203/223 (91%)
 Frame = -3

Query: 669 HQENYAHQPQTFNEMIDILSSTKYKVKQFRIVCDLLDYMKRNDKNMVPVDVLLVILRKYT 490
           HQ+ Y+H+P+ +NEMIDILSSTKYKVKQFRIVCD+LDYMKRNDK  VPV+VLL+ILRKYT
Sbjct: 292 HQDCYSHEPRAYNEMIDILSSTKYKVKQFRIVCDMLDYMKRNDKKSVPVEVLLMILRKYT 351

Query: 489 EKHLTHLQKFTHKKKIRVKTQPEINAFNLLLDSLCKCCLVEEAEGMFQKVKSRVKPDANT 310
           EKHL HL KF  KKKIRVKTQPEINA NLLLD+LCKC LVE+A+ MF++VK++VKPDANT
Sbjct: 352 EKHLAHLHKFAKKKKIRVKTQPEINALNLLLDALCKCSLVEDAQAMFRRVKNKVKPDANT 411

Query: 309 YNILFFGWCRVRNPMRGMQVLEEMIKLGHTPDNFTYTTAIDTFCRAGMVSEAVALFEFMR 130
           YNILFFGWCRVRNP RGM+VLEEMI++GHTPD+FTY TAID+FC+AGMV+EA  LFEFMR
Sbjct: 412 YNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMR 471

Query: 129 TRGSTMSSPTAKTYAIMIIALAQSDRMEECFKLITDMSSSGCL 1
           T+GSTMSSPTAKTYAIMI+AL QSDR EECFKLI DM +SG L
Sbjct: 472 TKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVL 514



 Score = 33.1 bits (74), Expect(2) = e-105
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = -1

Query: 722 EVLRKLHFEEKIAFRFF 672
           E+L K+HFEEK+AFRFF
Sbjct: 271 EILGKIHFEEKMAFRFF 287


>emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
          Length = 708

 Score =  375 bits (964), Expect(2) = e-105
 Identities = 178/223 (79%), Positives = 203/223 (91%)
 Frame = -3

Query: 669 HQENYAHQPQTFNEMIDILSSTKYKVKQFRIVCDLLDYMKRNDKNMVPVDVLLVILRKYT 490
           HQ+ Y+H+P+ +NEMIDILSSTKYKVKQFRIVCD+LDYMKRNDK  VPV+VLL+ILRKYT
Sbjct: 265 HQDCYSHEPRAYNEMIDILSSTKYKVKQFRIVCDMLDYMKRNDKKSVPVEVLLMILRKYT 324

Query: 489 EKHLTHLQKFTHKKKIRVKTQPEINAFNLLLDSLCKCCLVEEAEGMFQKVKSRVKPDANT 310
           EKHL HL KF  KKKIRVKTQPEINA NLLLD+LCKC LVE+A+ MF++VK++VKPDANT
Sbjct: 325 EKHLAHLHKFAKKKKIRVKTQPEINALNLLLDALCKCSLVEDAQAMFRRVKNKVKPDANT 384

Query: 309 YNILFFGWCRVRNPMRGMQVLEEMIKLGHTPDNFTYTTAIDTFCRAGMVSEAVALFEFMR 130
           YNILFFGWCRVRNP RGM+VLEEMI++GHTPD+FTY TAID+FC+AGMV+EA  LFEFMR
Sbjct: 385 YNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMR 444

Query: 129 TRGSTMSSPTAKTYAIMIIALAQSDRMEECFKLITDMSSSGCL 1
           T+GSTMSSPTAKTYAIMI+AL QSDR EECFKLI DM +SG L
Sbjct: 445 TKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVL 487



 Score = 33.1 bits (74), Expect(2) = e-105
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = -1

Query: 722 EVLRKLHFEEKIAFRFF 672
           E+L K+HFEEK+AFRFF
Sbjct: 244 EILGKIHFEEKMAFRFF 260


>ref|XP_002315827.1| predicted protein [Populus trichocarpa] gi|222864867|gb|EEF01998.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  372 bits (956), Expect(2) = e-103
 Identities = 172/223 (77%), Positives = 205/223 (91%)
 Frame = -3

Query: 669 HQENYAHQPQTFNEMIDILSSTKYKVKQFRIVCDLLDYMKRNDKNMVPVDVLLVILRKYT 490
           HQ+NY+H+P  +NEMIDIL+STKYK +QFRIVCD+LDYMKRN+KN+VPV+VLL ILR YT
Sbjct: 55  HQKNYSHEPCAYNEMIDILTSTKYKARQFRIVCDMLDYMKRNNKNVVPVEVLLTILRNYT 114

Query: 489 EKHLTHLQKFTHKKKIRVKTQPEINAFNLLLDSLCKCCLVEEAEGMFQKVKSRVKPDANT 310
           EK+LT +QKF  KK+IRVKTQPEINAFNLLLD+LCKCCL E+AEG+F++VK++VKPDANT
Sbjct: 115 EKYLTRVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLAEDAEGLFKRVKNKVKPDANT 174

Query: 309 YNILFFGWCRVRNPMRGMQVLEEMIKLGHTPDNFTYTTAIDTFCRAGMVSEAVALFEFMR 130
           YN++FFGWCRVRNP RGM+VLEEMI+LGHTPD+FTY TAID FCRAGMV+EA  LFEFMR
Sbjct: 175 YNVMFFGWCRVRNPTRGMKVLEEMIQLGHTPDSFTYITAIDAFCRAGMVNEAAELFEFMR 234

Query: 129 TRGSTMSSPTAKTYAIMIIALAQSDRMEECFKLITDMSSSGCL 1
           T+GSTMSSPTAKTYAIMI AL +++RM+ECFKL+ DM +SGCL
Sbjct: 235 TKGSTMSSPTAKTYAIMIGALVRNNRMDECFKLLEDMINSGCL 277



 Score = 29.3 bits (64), Expect(2) = e-103
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -1

Query: 719 VLRKLHFEEKIAFRFF 672
           VL +LHFEEK +FRFF
Sbjct: 35  VLGRLHFEEKTSFRFF 50


>ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Glycine max]
          Length = 466

 Score =  360 bits (924), Expect(2) = 6e-99
 Identities = 167/223 (74%), Positives = 202/223 (90%)
 Frame = -3

Query: 669 HQENYAHQPQTFNEMIDILSSTKYKVKQFRIVCDLLDYMKRNDKNMVPVDVLLVILRKYT 490
           HQE+Y+H+P  +N+M+DILSST+YKVKQFRIVCD+L+YMKRN+K  VPV+VLLVILRKYT
Sbjct: 49  HQEDYSHEPCAYNDMMDILSSTRYKVKQFRIVCDVLEYMKRNNKTTVPVEVLLVILRKYT 108

Query: 489 EKHLTHLQKFTHKKKIRVKTQPEINAFNLLLDSLCKCCLVEEAEGMFQKVKSRVKPDANT 310
           EK+LTH+QKF  K++IRVKTQPEINAFNLLLD+LCKCCLVE+AE +++K++  VKP+A T
Sbjct: 109 EKYLTHVQKFARKRRIRVKTQPEINAFNLLLDALCKCCLVEDAETLYKKMRKTVKPNAET 168

Query: 309 YNILFFGWCRVRNPMRGMQVLEEMIKLGHTPDNFTYTTAIDTFCRAGMVSEAVALFEFMR 130
           YNI  FGWCRVRNP RGM++LEEM++LGH PDNF Y TAIDT+C+AGMV+EAV LFEFMR
Sbjct: 169 YNIFVFGWCRVRNPTRGMKLLEEMVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMR 228

Query: 129 TRGSTMSSPTAKTYAIMIIALAQSDRMEECFKLITDMSSSGCL 1
           T+GS++SSPTAKTYAI+I+ALAQ DRMEECFKLI  M SSGCL
Sbjct: 229 TKGSSISSPTAKTYAIIIVALAQHDRMEECFKLIGHMISSGCL 271



 Score = 27.3 bits (59), Expect(2) = 6e-99
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -1

Query: 719 VLRKLHFEEKIAFRFFT 669
           VL +L ++EKIA RFFT
Sbjct: 29  VLHRLRYDEKIALRFFT 45



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 4/155 (2%)
 Frame = -3

Query: 453 KKKIRVKTQPEINAFNLLLDSLCKCCLVEEAEGMFQKVKSR----VKPDANTYNILFFGW 286
           ++ + +  +P+  A+N  +D+ CK  +V EA  +F+ ++++      P A TY I+    
Sbjct: 190 EEMVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAIIIVAL 249

Query: 285 CRVRNPMRGMQVLEEMIKLGHTPDNFTYTTAIDTFCRAGMVSEAVALFEFMRTRGSTMSS 106
            +        +++  MI  G  PD  TY   I+  C  G + EA   ++F+   G+    
Sbjct: 250 AQHDRMEECFKLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEA---YKFLEEMGNKSYR 306

Query: 105 PTAKTYAIMIIALAQSDRMEECFKLITDMSSSGCL 1
           P   TY   +  L  + + E+  KL   M    C+
Sbjct: 307 PDIVTYNCFLKVLCDNKKSEDALKLYGRMIELNCI 341


>ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Glycine max]
          Length = 466

 Score =  360 bits (924), Expect(2) = 2e-98
 Identities = 167/223 (74%), Positives = 202/223 (90%)
 Frame = -3

Query: 669 HQENYAHQPQTFNEMIDILSSTKYKVKQFRIVCDLLDYMKRNDKNMVPVDVLLVILRKYT 490
           HQE+Y+H+P  +N+M+DILSST+YKVKQFRIVCD+L+YMKRN++ MVP +VLLVILRKYT
Sbjct: 49  HQEDYSHEPCAYNDMMDILSSTRYKVKQFRIVCDVLEYMKRNNRTMVPAEVLLVILRKYT 108

Query: 489 EKHLTHLQKFTHKKKIRVKTQPEINAFNLLLDSLCKCCLVEEAEGMFQKVKSRVKPDANT 310
           EK+LTH+QKF  KK+IRVKTQ EINAFNLLLD+LCKCCLVE+AE +++K++  VKP+A T
Sbjct: 109 EKYLTHMQKFAKKKRIRVKTQLEINAFNLLLDALCKCCLVEDAESLYKKMRKTVKPNAET 168

Query: 309 YNILFFGWCRVRNPMRGMQVLEEMIKLGHTPDNFTYTTAIDTFCRAGMVSEAVALFEFMR 130
           YNIL FGWCRVRNP RGM++LEEMI+LGH PDNFTY TAIDT+C+ GM++EAV LFEFMR
Sbjct: 169 YNILVFGWCRVRNPTRGMKLLEEMIELGHRPDNFTYNTAIDTYCKTGMITEAVDLFEFMR 228

Query: 129 TRGSTMSSPTAKTYAIMIIALAQSDRMEECFKLITDMSSSGCL 1
           T+GST+SSPTAKTYAI+I+ALAQ DRME+CFKLI  M SSGCL
Sbjct: 229 TKGSTISSPTAKTYAIIIVALAQHDRMEDCFKLIGHMISSGCL 271



 Score = 25.8 bits (55), Expect(2) = 2e-98
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -1

Query: 716 LRKLHFEEKIAFRFFT 669
           L +L ++EKIA RFFT
Sbjct: 30  LHRLRYDEKIALRFFT 45