BLASTX nr result

ID: Coptis25_contig00026217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026217
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29967.3| unnamed protein product [Vitis vinifera]              172   4e-41
ref|XP_002276611.1| PREDICTED: histone-lysine N-methyltransferas...   172   4e-41
ref|XP_003535101.1| PREDICTED: histone-lysine N-methyltransferas...   162   5e-38
ref|XP_002534573.1| protein with unknown function [Ricinus commu...   161   8e-38
ref|XP_002308346.1| SET domain protein [Populus trichocarpa] gi|...   161   8e-38

>emb|CBI29967.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  172 bits (436), Expect = 4e-41
 Identities = 84/115 (73%), Positives = 91/115 (79%)
 Frame = +3

Query: 6   VLARIRINAFRIDVAGGSSYEDLFLXXXXXXXXXXXXGNAVYMLSSFYNHDCDPNAHIIW 185
           VLAR RIN+FRI++AGGS YEDL              GNAVYML SFYNHDCDPN HIIW
Sbjct: 547 VLARFRINSFRIELAGGS-YEDLHSLAAASVETEAAVGNAVYMLPSFYNHDCDPNVHIIW 605

Query: 186 IENVNARLKALRDIEEGEELRICYIDASMEHSARQNILFEGFGFRCGCNRCLSGD 350
           I+NVNARLKALR+IE GEELRICYIDASM+H ARQ ILF+GFGFRC C RC SGD
Sbjct: 606 IDNVNARLKALREIEAGEELRICYIDASMDHDARQTILFQGFGFRCSCLRCSSGD 660


>ref|XP_002276611.1| PREDICTED: histone-lysine N-methyltransferase ATXR4-like [Vitis
           vinifera]
          Length = 327

 Score =  172 bits (436), Expect = 4e-41
 Identities = 84/115 (73%), Positives = 91/115 (79%)
 Frame = +3

Query: 6   VLARIRINAFRIDVAGGSSYEDLFLXXXXXXXXXXXXGNAVYMLSSFYNHDCDPNAHIIW 185
           VLAR RIN+FRI++AGGS YEDL              GNAVYML SFYNHDCDPN HIIW
Sbjct: 214 VLARFRINSFRIELAGGS-YEDLHSLAAASVETEAAVGNAVYMLPSFYNHDCDPNVHIIW 272

Query: 186 IENVNARLKALRDIEEGEELRICYIDASMEHSARQNILFEGFGFRCGCNRCLSGD 350
           I+NVNARLKALR+IE GEELRICYIDASM+H ARQ ILF+GFGFRC C RC SGD
Sbjct: 273 IDNVNARLKALREIEAGEELRICYIDASMDHDARQTILFQGFGFRCSCLRCSSGD 327


>ref|XP_003535101.1| PREDICTED: histone-lysine N-methyltransferase ATXR4-like [Glycine
           max]
          Length = 313

 Score =  162 bits (409), Expect = 5e-38
 Identities = 77/115 (66%), Positives = 90/115 (78%)
 Frame = +3

Query: 6   VLARIRINAFRIDVAGGSSYEDLFLXXXXXXXXXXXXGNAVYMLSSFYNHDCDPNAHIIW 185
           +LARIRINAFRI++AGG  YEDL              GNAVY+L SFYNHDCDPNAHIIW
Sbjct: 200 ILARIRINAFRIELAGGL-YEDLLASAVASVEAEAAVGNAVYLLPSFYNHDCDPNAHIIW 258

Query: 186 IENVNARLKALRDIEEGEELRICYIDASMEHSARQNILFEGFGFRCGCNRCLSGD 350
           I+N +A+LKALRDI EGEELRICYIDAS++ +ARQ +L  GFGF+C C+RCL GD
Sbjct: 259 IDNADAKLKALRDIVEGEELRICYIDASLDRNARQELLSRGFGFQCNCSRCLHGD 313


>ref|XP_002534573.1| protein with unknown function [Ricinus communis]
           gi|223524997|gb|EEF27811.1| protein with unknown
           function [Ricinus communis]
          Length = 319

 Score =  161 bits (407), Expect = 8e-38
 Identities = 79/114 (69%), Positives = 88/114 (77%)
 Frame = +3

Query: 9   LARIRINAFRIDVAGGSSYEDLFLXXXXXXXXXXXXGNAVYMLSSFYNHDCDPNAHIIWI 188
           LARIRINAFRI++A G  YEDL              GN+VYML SF+NHDCDPNAHIIWI
Sbjct: 207 LARIRINAFRIELAVGL-YEDLLSSAAACIEAEAAVGNSVYMLPSFFNHDCDPNAHIIWI 265

Query: 189 ENVNARLKALRDIEEGEELRICYIDASMEHSARQNILFEGFGFRCGCNRCLSGD 350
           EN +ARLKALRDI+  EELRICYIDASM+H ARQ IL +GFGF+C C RCLSGD
Sbjct: 266 ENADARLKALRDIDPDEELRICYIDASMDHGARQTILLQGFGFKCNCLRCLSGD 319


>ref|XP_002308346.1| SET domain protein [Populus trichocarpa]
           gi|222854322|gb|EEE91869.1| SET domain protein [Populus
           trichocarpa]
          Length = 283

 Score =  161 bits (407), Expect = 8e-38
 Identities = 78/115 (67%), Positives = 89/115 (77%)
 Frame = +3

Query: 6   VLARIRINAFRIDVAGGSSYEDLFLXXXXXXXXXXXXGNAVYMLSSFYNHDCDPNAHIIW 185
           VLARIRINAFRI++A GS YEDL              GNAVYML S YNHDCDPNAHI+W
Sbjct: 170 VLARIRINAFRIELAVGS-YEDLLSSAAACIEAEAAVGNAVYMLPSLYNHDCDPNAHIVW 228

Query: 186 IENVNARLKALRDIEEGEELRICYIDASMEHSARQNILFEGFGFRCGCNRCLSGD 350
           I+N +A+LKAL D+EE EELRICYIDASM+H ARQ+ L +GFGF+C C RCLSGD
Sbjct: 229 IDNADAQLKALCDVEEDEELRICYIDASMDHDARQSFLLQGFGFKCNCLRCLSGD 283


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