BLASTX nr result

ID: Coptis25_contig00026210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026210
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274374.1| PREDICTED: zinc finger protein ZAT5 [Vitis v...    63   2e-08
ref|XP_002523729.1| conserved hypothetical protein [Ricinus comm...    62   5e-08
ref|XP_002267645.1| PREDICTED: zinc finger protein ZAT5 [Vitis v...    60   2e-07
ref|XP_002313544.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
gb|ABK95183.1| unknown [Populus trichocarpa]                           58   7e-07

>ref|XP_002274374.1| PREDICTED: zinc finger protein ZAT5 [Vitis vinifera]
          Length = 296

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 45/108 (41%), Positives = 54/108 (50%)
 Frame = -1

Query: 331 EEVMGTTDHVHIVKGKRTKRQRPSSPLAAFDMTTSNXXXXXXXXXXXXXXXXGHIYGYQS 152
           EE MG++DH  IVKGKRTKRQR  SP     + TS+                G      S
Sbjct: 5   EEFMGSSDHTQIVKGKRTKRQRTLSPFGV--LVTSSSSSGGGGGGGGGGGGGGDYSSISS 62

Query: 151 PTNSVXXXXXXXXXEDMANCLILLARGHNTDVSKRIDDHVGAMEKFSS 8
           PT+S          EDMANCLILLA+G    +  R  +  GA+EK SS
Sbjct: 63  PTSSGEVLESTEEEEDMANCLILLAQG----LGPRQIEEGGAVEKLSS 106


>ref|XP_002523729.1| conserved hypothetical protein [Ricinus communis]
           gi|223537033|gb|EEF38669.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 345

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 45/119 (37%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
 Frame = -1

Query: 346 MEIIGEEVMGTTDHVHIVKGKRTKRQRPSSPLAAF---DMTTSNXXXXXXXXXXXXXXXX 176
           ME+  EE MG+ D   I+KGKRTKRQR SSP  A     +++S+                
Sbjct: 1   MELAQEEFMGSNDLTQIMKGKRTKRQRSSSPHKAAGGGGVSSSSSSGCGDGGGREKGVVI 60

Query: 175 GHIYG-YQSPTNSVXXXXXXXXXEDMANCLILLARGHNTDVSKRIDDHVGAMEKFSSRR 2
              YG   S T+           EDMANCLILLA+G    +    +++   MEKFSSR+
Sbjct: 61  EEYYGSISSYTSCSEVYESTEEEEDMANCLILLAQGDGPRIIDESNNNGTRMEKFSSRK 119


>ref|XP_002267645.1| PREDICTED: zinc finger protein ZAT5 [Vitis vinifera]
           gi|147788170|emb|CAN64839.1| hypothetical protein
           VITISV_030377 [Vitis vinifera]
          Length = 276

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/97 (41%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
 Frame = -1

Query: 337 IGEEVMGTTDHVHIVKGKRTKRQRPSSPLAAFDMTTSNXXXXXXXXXXXXXXXXGHIYGY 158
           + EEVMG+ D  H++KGKRTKRQR SSPLA    ++S+                G     
Sbjct: 3   VQEEVMGSNDQTHVIKGKRTKRQRLSSPLALTMASSSSSGEEGDGGGRVSDNSGGVDRAT 62

Query: 157 QSPTNSV--XXXXXXXXXEDMANCLILLARGHNTDVS 53
            SPT S            EDMANCLILLA+G +  V+
Sbjct: 63  TSPTTSTDHEFAESTEEEEDMANCLILLAQGQSRKVA 99


>ref|XP_002313544.1| predicted protein [Populus trichocarpa] gi|222849952|gb|EEE87499.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 46/112 (41%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
 Frame = -1

Query: 331 EEVMGTTDHVHIVKGKRTKRQRPSSPLAAFDMTTSNXXXXXXXXXXXXXXXXGHIYGYQS 152
           +E MG+ D   IVKGKRTKRQR SSP     + TS                        S
Sbjct: 8   DEFMGSNDLTQIVKGKRTKRQRSSSP---HKVATSCSSSGYGGGGGERGVLIEEYGSISS 64

Query: 151 PTNSVXXXXXXXXXEDMANCLILLARGHNTDV-SKRIDDHVGA-MEKFSSRR 2
           PT S          EDMANCLILLA+G   DV  K+I ++ G+ +EKFS+R+
Sbjct: 65  PTTSSEVCESTEEEEDMANCLILLAQG---DVPPKQIHENKGSKVEKFSARK 113


>gb|ABK95183.1| unknown [Populus trichocarpa]
          Length = 310

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
 Frame = -1

Query: 331 EEVMGTTDHVHIVKGKRTKRQRPSSPLAAFDMTTSNXXXXXXXXXXXXXXXXGHIYGYQS 152
           ++ +G+ D   I+KGKRTKRQR SSP      ++S+                 H     S
Sbjct: 7   DDFVGSNDLTQIIKGKRTKRQRSSSPYMVMTSSSSSGYGGGDGGGERGVLIEEH-GSISS 65

Query: 151 PTNSVXXXXXXXXXEDMANCLILLARGHNTDVSKRI-DDHVGAMEKFSSRR 2
           PT S          EDMANCLILLA+G   D  K+I ++  G +EKF +R+
Sbjct: 66  PTTSSEVTERTEEEEDMANCLILLAQG---DRPKQIHENKSGKVEKFRARK 113


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