BLASTX nr result

ID: Coptis25_contig00026205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026205
         (1590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268701.1| PREDICTED: arogenate dehydratase/prephenate ...   677   0.0  
gb|ACF17637.1| putative arogenate dehydratase [Capsicum annuum]       649   0.0  
gb|AAS79603.1| prephenate dehydratase [Ipomoea trifida] gi|11856...   642   0.0  
gb|ACY79502.1| arogenate dehydratase 1 [Petunia x hybrida]            640   0.0  
gb|ACY79504.1| arogenate dehydratase 3 [Petunia x hybrida]            635   e-180

>ref|XP_002268701.1| PREDICTED: arogenate dehydratase/prephenate dehydratase 6,
            chloroplastic [Vitis vinifera]
            gi|147815482|emb|CAN68383.1| hypothetical protein
            VITISV_041082 [Vitis vinifera]
          Length = 411

 Score =  677 bits (1748), Expect = 0.0
 Identities = 346/394 (87%), Positives = 364/394 (92%), Gaps = 2/394 (0%)
 Frame = -3

Query: 1456 IRVRKLGAPSYRTQVGN--IRCMYRSESASARGVVGSNRADWQSSCAILASKVVSQQQET 1283
            IR R L  P++R       ++C+Y+S+ ++  G VG +RADWQSSCAILASKVVSQQQ+T
Sbjct: 14   IRTRPL-VPTHRVAPHRLVVQCVYKSDYSNFSGGVGFSRADWQSSCAILASKVVSQQQDT 72

Query: 1282 EKNGNADLTAVNGHQTLDLVPIENLPKPLTITDLSPAPMHGSTIRVAYQGVPGAYSEAAA 1103
            EK+GNADLTAVNGH+TLDLVPIENLPKPLTITDLSPAPMHGS +RVAYQGVPGAYSEAAA
Sbjct: 73   EKSGNADLTAVNGHKTLDLVPIENLPKPLTITDLSPAPMHGSELRVAYQGVPGAYSEAAA 132

Query: 1102 GKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEV 923
            GKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEV
Sbjct: 133  GKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEV 192

Query: 922  QLPVHHCLLALPGVRKDYLTRVISHPQALAQCELTLTKLGLNVAREAVDDTAGAAEFVAA 743
            QLPVHHCLLALPGVRK+YLTRVISHPQALAQCE TLTKLGLNVAREAVDDTAGAAE+VA 
Sbjct: 193  QLPVHHCLLALPGVRKEYLTRVISHPQALAQCEHTLTKLGLNVAREAVDDTAGAAEYVAL 252

Query: 742  NDLRDTXXXXXXXXADLYGLNILADGIQDDSGNVTRFVMLAREPIIPRTDRPFKTSIVFA 563
            N+LRDT        ADLYGL ILADGIQDDS NVTRFVMLAREPIIPRTDRPFKTSIVFA
Sbjct: 253  NNLRDTAAIASARAADLYGLQILADGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFA 312

Query: 562  HDNKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEA 383
            HD KGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFY+DFEA
Sbjct: 313  HD-KGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYVDFEA 371

Query: 382  SMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPW 281
            SMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPW
Sbjct: 372  SMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPW 405


>gb|ACF17637.1| putative arogenate dehydratase [Capsicum annuum]
          Length = 427

 Score =  649 bits (1675), Expect = 0.0
 Identities = 339/419 (80%), Positives = 364/419 (86%), Gaps = 21/419 (5%)
 Frame = -3

Query: 1471 NHNPQIRVRKLGAPSYRTQVGN---IRCMYRSESASAR----------------GVVGSN 1349
            N +  I ++ L +PS    V     ++C YR ESA+                  G VG++
Sbjct: 5    NPSSGISLKSLTSPSLVQTVPVKLVVKCGYRFESANTNASKVNTNGAPASYNFAGHVGAS 64

Query: 1348 RADWQSSCAILASKVVSQQQETEKNGNA-DLTAVNGHQTLDLVPIEN-LPKPLTITDLSP 1175
            RADWQSSCAILASKVVSQQ +TEK G A ++T VNGH++LDLVPI+N LPKPLTITDLSP
Sbjct: 65   RADWQSSCAILASKVVSQQPDTEKTGGAGEITVVNGHKSLDLVPIDNNLPKPLTITDLSP 124

Query: 1174 APMHGSTIRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVEN 995
            APMHGS +RVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVEN
Sbjct: 125  APMHGSQLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVEN 184

Query: 994  SLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKDYLTRVISHPQALAQCELTL 815
            SLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRK+YLTRVISHPQALAQCELTL
Sbjct: 185  SLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALAQCELTL 244

Query: 814  TKLGLNVAREAVDDTAGAAEFVAANDLRDTXXXXXXXXADLYGLNILADGIQDDSGNVTR 635
            TKLGLNV REAVDDTAGAAE++AAN+LRDT        A+LYGL IL++GIQDDS NVTR
Sbjct: 245  TKLGLNVVREAVDDTAGAAEYIAANNLRDTAAIASARAAELYGLQILSEGIQDDSSNVTR 304

Query: 634  FVMLAREPIIPRTDRPFKTSIVFAHDNKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPI 455
            FVMLAREPIIPRTDRPFKTSIVFAHD KGTSVLFKVLSAFAFRNISLTKIESRPHRNRPI
Sbjct: 305  FVMLAREPIIPRTDRPFKTSIVFAHD-KGTSVLFKVLSAFAFRNISLTKIESRPHRNRPI 363

Query: 454  RLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWS 278
            RLVDDANVGTAKHFEYMFY+DFEASMA+VRAQNALAEVQEFTSFLRVLGSYPMDMTPWS
Sbjct: 364  RLVDDANVGTAKHFEYMFYVDFEASMADVRAQNALAEVQEFTSFLRVLGSYPMDMTPWS 422


>gb|AAS79603.1| prephenate dehydratase [Ipomoea trifida] gi|118562900|dbj|BAF37790.1|
            hypothetical protein [Ipomoea trifida]
          Length = 443

 Score =  642 bits (1657), Expect = 0.0
 Identities = 337/439 (76%), Positives = 370/439 (84%), Gaps = 35/439 (7%)
 Frame = -3

Query: 1489 LESLYSNHNPQIR--VRKLGAPSYRTQVGN----IRCMYRSESASARGV----------- 1361
            ++SL S+    ++   R    P +  +VG+    ++C +R +SA+A G            
Sbjct: 1    MQSLTSSSGINLKSLTRASSPPGFTHRVGSNRLAVQCAFRFDSANANGAAAAAAANSSST 60

Query: 1360 --------------VGSNRADWQSSCAILASKVVSQQQETEKNGN--ADLTAVNGHQT-L 1232
                          +G+ RADWQSSC+ILASKVVSQQQ+ +K+G    ++TAVNGH T L
Sbjct: 61   VNTNSAPSGNFGGHIGATRADWQSSCSILASKVVSQQQDVQKSGGDAGNITAVNGHMTTL 120

Query: 1231 DLVPIEN-LPKPLTITDLSPAPMHGSTIRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFE 1055
            DLVPIE+ LPKPLTITDLSPAPMHGST+RVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFE
Sbjct: 121  DLVPIESSLPKPLTITDLSPAPMHGSTLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFE 180

Query: 1054 VAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRK 875
            VAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRK
Sbjct: 181  VAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRK 240

Query: 874  DYLTRVISHPQALAQCELTLTKLGLNVAREAVDDTAGAAEFVAANDLRDTXXXXXXXXAD 695
            +YLTRVISHPQALAQCELTLTKLGLNVAREAVDDTAGAAE++AAN+LRDT        A+
Sbjct: 241  EYLTRVISHPQALAQCELTLTKLGLNVAREAVDDTAGAAEYIAANNLRDTAAIASARAAE 300

Query: 694  LYGLNILADGIQDDSGNVTRFVMLAREPIIPRTDRPFKTSIVFAHDNKGTSVLFKVLSAF 515
            LYGL++L +GIQDDS NVTRFVMLAREPIIPRTDRPFKTSIVFAHD KGTSVLFKVLSAF
Sbjct: 301  LYGLHVLEEGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHD-KGTSVLFKVLSAF 359

Query: 514  AFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQE 335
            AFRNISLTKIESRPHRNRPIRLVDD NVGTAKHFEYMFY+DFEASMA+VRAQNALAEVQE
Sbjct: 360  AFRNISLTKIESRPHRNRPIRLVDDENVGTAKHFEYMFYVDFEASMADVRAQNALAEVQE 419

Query: 334  FTSFLRVLGSYPMDMTPWS 278
            FTSFLRVLGSYPMDMTPWS
Sbjct: 420  FTSFLRVLGSYPMDMTPWS 438


>gb|ACY79502.1| arogenate dehydratase 1 [Petunia x hybrida]
          Length = 424

 Score =  640 bits (1651), Expect = 0.0
 Identities = 332/410 (80%), Positives = 359/410 (87%), Gaps = 15/410 (3%)
 Frame = -3

Query: 1450 VRKLGAPSYRTQVGN---IRCMYRSESASA-----------RGVVGSNRADWQSSCAILA 1313
            +RK   P  +T+      I+C Y+ +SA+             G VG++RADWQSSCAILA
Sbjct: 16   IRKTSLPPGQTRFITGRVIKCGYQVDSANTVNTAGAPASYNSGHVGASRADWQSSCAILA 75

Query: 1312 SKVVSQQQETEKNGNA-DLTAVNGHQTLDLVPIENLPKPLTITDLSPAPMHGSTIRVAYQ 1136
            SKVVSQQ +TEK G A ++TAVNGH+TLDLV I+NLPK LTITDLSPAPMHGST+RVAYQ
Sbjct: 76   SKVVSQQPDTEKTGGAGNITAVNGHKTLDLVSIDNLPKALTITDLSPAPMHGSTLRVAYQ 135

Query: 1135 GVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLL 956
            GVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLL
Sbjct: 136  GVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLL 195

Query: 955  LRHRLHIVGEVQLPVHHCLLALPGVRKDYLTRVISHPQALAQCELTLTKLGLNVAREAVD 776
            LRHRLHIVGEVQLPVHHCLLALPGVRK+YLTRVISHPQALAQCELT+TKLGLNVAREAVD
Sbjct: 196  LRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALAQCELTITKLGLNVAREAVD 255

Query: 775  DTAGAAEFVAANDLRDTXXXXXXXXADLYGLNILADGIQDDSGNVTRFVMLAREPIIPRT 596
            DTAGAAE++AAN+LRDT        A+LYGL ILA+GIQDDS NVTRFVMLAREPIIPR 
Sbjct: 256  DTAGAAEYIAANNLRDTAAVASARAAELYGLQILAEGIQDDSSNVTRFVMLAREPIIPRM 315

Query: 595  DRPFKTSIVFAHDNKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKH 416
            DRPFKTSIVFAH+  GT VLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKH
Sbjct: 316  DRPFKTSIVFAHE--GTGVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKH 373

Query: 415  FEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSNIKD 266
            FEYMFY+DF+ASMA+VRAQNALAEVQEFTSFLRVLGSYPMDMTP    +D
Sbjct: 374  FEYMFYVDFDASMADVRAQNALAEVQEFTSFLRVLGSYPMDMTPCCPSRD 423


>gb|ACY79504.1| arogenate dehydratase 3 [Petunia x hybrida]
          Length = 434

 Score =  635 bits (1639), Expect = e-180
 Identities = 329/402 (81%), Positives = 354/402 (88%), Gaps = 22/402 (5%)
 Frame = -3

Query: 1405 IRCMYRSESASA------------------RGVVGSNRADWQSSCAILASKVVSQQQETE 1280
            I+C+YR +S +A                   G VG++R DWQSSCAILASKVVSQQQ+TE
Sbjct: 33   IKCVYRFDSVNAGAAAVNTGVVNTPASNNTAGHVGASRTDWQSSCAILASKVVSQQQDTE 92

Query: 1279 KNGNA-DLTAVNGHQ--TLDLVPIE-NLPKPLTITDLSPAPMHGSTIRVAYQGVPGAYSE 1112
            K+G A ++TAVNGH+   LDL+P+E N  KPLTITDLSPAPMHG+ +RVAYQGVPGAYSE
Sbjct: 93   KSGGAGNITAVNGHKILNLDLLPVESNRAKPLTITDLSPAPMHGAQLRVAYQGVPGAYSE 152

Query: 1111 AAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIV 932
            AAAGKAYP CEAIPCDQFEVAFQAVELWIADRAVLP+ENSLGGSIHRNYDLLLRHRLHIV
Sbjct: 153  AAAGKAYPKCEAIPCDQFEVAFQAVELWIADRAVLPIENSLGGSIHRNYDLLLRHRLHIV 212

Query: 931  GEVQLPVHHCLLALPGVRKDYLTRVISHPQALAQCELTLTKLGLNVAREAVDDTAGAAEF 752
            GEVQLPVHHCLLALPGVRK+YLTRVISHPQALAQCELTLTKLGLNVAREAVDDTAGAAE+
Sbjct: 213  GEVQLPVHHCLLALPGVRKEYLTRVISHPQALAQCELTLTKLGLNVAREAVDDTAGAAEY 272

Query: 751  VAANDLRDTXXXXXXXXADLYGLNILADGIQDDSGNVTRFVMLAREPIIPRTDRPFKTSI 572
            +AAN+LRDT        A+LYGL+IL  GIQDD  NVTRFVMLAREPIIPRTDRPFKTSI
Sbjct: 273  IAANNLRDTAAIASSRAAELYGLDILEQGIQDDLSNVTRFVMLAREPIIPRTDRPFKTSI 332

Query: 571  VFAHDNKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYID 392
            VFAHD KGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFY+D
Sbjct: 333  VFAHD-KGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYVD 391

Query: 391  FEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSNIKD 266
            FEASMA+VRAQNALAEVQEFTSFLRVLGSYPMDMTPWS  +D
Sbjct: 392  FEASMADVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPSRD 433


Top