BLASTX nr result

ID: Coptis25_contig00026202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026202
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144410.1| PREDICTED: 4-coumarate--CoA ligase-like 6-li...   136   2e-30
ref|XP_003612659.1| 4-coumarate-CoA ligase [Medicago truncatula]...   136   2e-30
ref|XP_003517649.1| PREDICTED: 4-coumarate--CoA ligase-like 6-li...   128   6e-28
ref|XP_003607426.1| 4-coumarate CoA ligase [Medicago truncatula]...   127   9e-28
ref|XP_002270360.1| PREDICTED: 4-coumarate--CoA ligase-like 6 [V...   125   4e-27

>ref|XP_004144410.1| PREDICTED: 4-coumarate--CoA ligase-like 6-like [Cucumis sativus]
           gi|449500076|ref|XP_004160997.1| PREDICTED:
           4-coumarate--CoA ligase-like 6-like [Cucumis sativus]
          Length = 577

 Score =  136 bits (342), Expect = 2e-30
 Identities = 60/87 (68%), Positives = 77/87 (88%)
 Frame = +3

Query: 3   HTGDIVHFDGDGYLYILDRLKEMIKYKGFQIAPADIEAVLMSHPEILDVAITGYTDDEAG 182
           HTGDIV+FD DGYLY++DRLKE+IKYKGFQIAP D+EAV+++HPE+LD A+    D+E G
Sbjct: 453 HTGDIVYFDRDGYLYVVDRLKEVIKYKGFQIAPTDLEAVVITHPEVLDTAVAAAKDEECG 512

Query: 183 EIPVAFVIKKPGSKLSQEDVMDFAARQ 263
           EIPVAFV+KKPGS L+Q+DV+D+ A+Q
Sbjct: 513 EIPVAFVVKKPGSALTQKDVVDYVAQQ 539


>ref|XP_003612659.1| 4-coumarate-CoA ligase [Medicago truncatula]
           gi|355513994|gb|AES95617.1| 4-coumarate-CoA ligase
           [Medicago truncatula]
          Length = 555

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/87 (74%), Positives = 75/87 (86%)
 Frame = +3

Query: 3   HTGDIVHFDGDGYLYILDRLKEMIKYKGFQIAPADIEAVLMSHPEILDVAITGYTDDEAG 182
           HTGDIV+FD DGYLY+ DRLKE IKYKGFQI PAD+EAVL+ HPEI DVA+TG  D+EAG
Sbjct: 432 HTGDIVYFDQDGYLYLSDRLKEFIKYKGFQIPPADLEAVLILHPEIADVAVTGAKDEEAG 491

Query: 183 EIPVAFVIKKPGSKLSQEDVMDFAARQ 263
           EIPVAFV+KK GS LS +DV+DF A+Q
Sbjct: 492 EIPVAFVVKKVGSVLSPKDVIDFVAKQ 518


>ref|XP_003517649.1| PREDICTED: 4-coumarate--CoA ligase-like 6-like [Glycine max]
          Length = 545

 Score =  128 bits (321), Expect = 6e-28
 Identities = 59/87 (67%), Positives = 74/87 (85%)
 Frame = +3

Query: 3   HTGDIVHFDGDGYLYILDRLKEMIKYKGFQIAPADIEAVLMSHPEILDVAITGYTDDEAG 182
           HTGD+V+FD DGYL+I DRLK++IKYKGFQIAPAD+EAVL+ HPE++DVA+T   D+E G
Sbjct: 422 HTGDVVYFDHDGYLHISDRLKDIIKYKGFQIAPADLEAVLILHPEVVDVAVTRAMDEETG 481

Query: 183 EIPVAFVIKKPGSKLSQEDVMDFAARQ 263
           EIPVAFV++K GS LS + +MDF A Q
Sbjct: 482 EIPVAFVVRKVGSVLSPKHIMDFVAEQ 508


>ref|XP_003607426.1| 4-coumarate CoA ligase [Medicago truncatula]
           gi|355508481|gb|AES89623.1| 4-coumarate CoA ligase
           [Medicago truncatula]
          Length = 542

 Score =  127 bits (319), Expect = 9e-28
 Identities = 59/87 (67%), Positives = 74/87 (85%)
 Frame = +3

Query: 3   HTGDIVHFDGDGYLYILDRLKEMIKYKGFQIAPADIEAVLMSHPEILDVAITGYTDDEAG 182
           HTGDIV+FD DGYL++ DRLK++IKYKGFQIAPAD+EAVL+ HPEI+D A+T   D+E G
Sbjct: 419 HTGDIVYFDQDGYLHLADRLKDIIKYKGFQIAPADLEAVLILHPEIIDAAVTAAEDEEIG 478

Query: 183 EIPVAFVIKKPGSKLSQEDVMDFAARQ 263
           EIPVAFV+KK GS LS +DV+++ A Q
Sbjct: 479 EIPVAFVVKKVGSVLSPKDVVNYVAEQ 505


>ref|XP_002270360.1| PREDICTED: 4-coumarate--CoA ligase-like 6 [Vitis vinifera]
           gi|296083381|emb|CBI23270.3| unnamed protein product
           [Vitis vinifera]
          Length = 571

 Score =  125 bits (314), Expect = 4e-27
 Identities = 55/87 (63%), Positives = 72/87 (82%)
 Frame = +3

Query: 3   HTGDIVHFDGDGYLYILDRLKEMIKYKGFQIAPADIEAVLMSHPEILDVAITGYTDDEAG 182
           HTGDIV FD DGYLY+  R+KE+IKYKGFQIAP D+E++L+SHPEI D A+ G  D+EAG
Sbjct: 447 HTGDIVSFDQDGYLYMFSRIKEIIKYKGFQIAPVDLESILISHPEISDAAVAGVGDEEAG 506

Query: 183 EIPVAFVIKKPGSKLSQEDVMDFAARQ 263
           E+PVAFV+K+PGS LSQ  ++++  +Q
Sbjct: 507 EVPVAFVVKRPGSALSQAAIINYVEKQ 533


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