BLASTX nr result

ID: Coptis25_contig00026184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026184
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317122.1| nbs-lrr resistance protein [Populus trichoca...   206   6e-51
ref|XP_002316539.1| nbs-lrr resistance protein [Populus trichoca...   172   1e-40
ref|XP_002302960.1| cc-nbs-lrr resistance protein [Populus trich...   146   7e-33
ref|XP_002525457.1| leucine-rich repeat containing protein, puta...   144   2e-32
ref|XP_002336038.1| cc-nbs-lrr resistance protein [Populus trich...   143   5e-32

>ref|XP_002317122.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222860187|gb|EEE97734.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1234

 Score =  206 bits (524), Expect = 6e-51
 Identities = 105/172 (61%), Positives = 126/172 (73%), Gaps = 1/172 (0%)
 Frame = +1

Query: 1    ALRNLSIENCNSLKCLPMVMRSLKSLEHLTIMYCPKLATFPVDMQHLTTLRSLNILSCPE 180
            +LR+LSIENC+SL  LP  M+   +LE LTIMYC  L + P  +QHL+ L+SL+ILSC  
Sbjct: 1061 SLRSLSIENCHSLTSLPSRMQHATALERLTIMYCSNLVSLPNGLQHLSALKSLSILSCTG 1120

Query: 181  LTCLPEELQHVTTLQNLEIRSSPGLISLPEWVENLVSLRSLAISDCHNLSYLPEGLQRLS 360
            L  LPE LQ +TTLQNLEI   P ++ LP WVENLVSLRSL ISDC N+   P+GLQRL 
Sbjct: 1121 LASLPEGLQFITTLQNLEIHDCPEVMELPAWVENLVSLRSLTISDCQNIKSFPQGLQRLR 1180

Query: 361  ALQHMSIQECPSLEKRCERIRGEDWKKISHIPHIYIGSLGLAQ-QDIASSSS 513
            ALQH+SI+ CP LEKRC+R  G DW KISH P+IY+G   L Q +D ASSSS
Sbjct: 1181 ALQHLSIRGCPELEKRCQRGNGVDWHKISHTPYIYVGLSTLQQRRDTASSSS 1232



 Score = 86.7 bits (213), Expect = 7e-15
 Identities = 47/106 (44%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
 Frame = +1

Query: 85   LTIMYCPKLATFPVDMQHLTTLRSLNILSCPELTCLPEELQHVTTLQNLEIRSSPGLISL 264
            LTI +CPKL + P ++  L  L+ L I    EL  LP  L ++T+L++LEI   P L+SL
Sbjct: 992  LTISFCPKLRSLPANVGQLQNLKFLRIGWFQELHSLPHGLTNLTSLESLEIIECPNLVSL 1051

Query: 265  P-EWVENLVSLRSLAISDCHNLSYLPEGLQRLSALQHMSIQECPSL 399
            P E +E L SLRSL+I +CH+L+ LP  +Q  +AL+ ++I  C +L
Sbjct: 1052 PEESLEGLSSLRSLSIENCHSLTSLPSRMQHATALERLTIMYCSNL 1097



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 48/136 (35%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
 Frame = +1

Query: 4    LRNLSIENCNSLKCLPMVMRSLKSLEHLTIMYCPKLATFPVDMQHLTTLRSLNIL---SC 174
            L  L+I NC  L  +P       SL+H+ I  C      PV ++ +  LRS++ L   + 
Sbjct: 922  LNKLTIINCPVLITMPW----FPSLQHVEIRNC-----HPVMLRSVAQLRSISTLIIGNF 972

Query: 175  PELTCLPEEL-QHVTTLQNLEIRSSPGLISLPEWVENLVSLRSLAISDCHNLSYLPEGLQ 351
            PEL  +P+ L ++   L +L I   P L SLP  V  L +L+ L I     L  LP GL 
Sbjct: 973  PELLYIPKALIENNLLLLSLTISFCPKLRSLPANVGQLQNLKFLRIGWFQELHSLPHGLT 1032

Query: 352  RLSALQHMSIQECPSL 399
             L++L+ + I ECP+L
Sbjct: 1033 NLTSLESLEIIECPNL 1048


>ref|XP_002316539.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222859604|gb|EEE97151.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1065

 Score =  172 bits (436), Expect = 1e-40
 Identities = 89/164 (54%), Positives = 108/164 (65%)
 Frame = +1

Query: 1    ALRNLSIENCNSLKCLPMVMRSLKSLEHLTIMYCPKLATFPVDMQHLTTLRSLNILSCPE 180
            +LR+LSIENC+SL  LP  M+   +LE LTIMYC  L + P  +QHL+ L+SL+ILSC  
Sbjct: 918  SLRSLSIENCHSLTSLPSRMQHATALERLTIMYCSNLVSLPNGLQHLSALKSLSILSCTG 977

Query: 181  LTCLPEELQHVTTLQNLEIRSSPGLISLPEWVENLVSLRSLAISDCHNLSYLPEGLQRLS 360
            L  LPE LQ +TTLQNLEI   PG++ LP WVENLVSLRSL ISDC N+           
Sbjct: 978  LASLPEGLQFITTLQNLEIHDCPGVMELPAWVENLVSLRSLTISDCQNI----------- 1026

Query: 361  ALQHMSIQECPSLEKRCERIRGEDWKKISHIPHIYIGSLGLAQQ 492
                     CP LEKRC+R  G DW+KISH P+IY+GS  L Q+
Sbjct: 1027 ---------CPELEKRCQRGNGVDWQKISHTPYIYVGSSTLQQR 1061


>ref|XP_002302960.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844686|gb|EEE82233.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1091

 Score =  146 bits (368), Expect = 7e-33
 Identities = 76/156 (48%), Positives = 97/156 (62%)
 Frame = +1

Query: 1    ALRNLSIENCNSLKCLPMVMRSLKSLEHLTIMYCPKLATFPVDMQHLTTLRSLNILSCPE 180
            +L  LSI  C  L  LPM    L SL  L+I YC + A+    ++HLT L  L++  CPE
Sbjct: 932  SLEVLSINGCGRLNSLPM--NCLSSLRRLSIKYCDQFASLSEGVRHLTALEDLSLFGCPE 989

Query: 181  LTCLPEELQHVTTLQNLEIRSSPGLISLPEWVENLVSLRSLAISDCHNLSYLPEGLQRLS 360
            L  LPE +QH+T+L++L I    GL SLP  +  L SL SL I  C NL   P+G+Q LS
Sbjct: 990  LNSLPESIQHLTSLRSLSIWYCKGLTSLPYQIGYLTSLSSLKIRGCPNLMSFPDGVQSLS 1049

Query: 361  ALQHMSIQECPSLEKRCERIRGEDWKKISHIPHIYI 468
             L  ++I ECP+LEKRC + RGEDW KI+HIP I I
Sbjct: 1050 KLSKLTIDECPNLEKRCAKKRGEDWPKIAHIPSIQI 1085


>ref|XP_002525457.1| leucine-rich repeat containing protein, putative [Ricinus communis]
            gi|223535270|gb|EEF36947.1| leucine-rich repeat
            containing protein, putative [Ricinus communis]
          Length = 1177

 Score =  144 bits (364), Expect = 2e-32
 Identities = 76/167 (45%), Positives = 109/167 (65%), Gaps = 1/167 (0%)
 Frame = +1

Query: 1    ALRNLSIENCNSLKCLPMVMRSLKSLEHLTIMYCPKLA-TFPVDMQHLTTLRSLNILSCP 177
            +LR L+I NC  L  L   ++ L +LE L I+ CPK+      D+Q+ T+L+SL I  C 
Sbjct: 965  SLRELTILNCCMLSSLAG-LQHLTALEKLCIVGCPKMVHLMEEDVQNFTSLQSLTISHCF 1023

Query: 178  ELTCLPEELQHVTTLQNLEIRSSPGLISLPEWVENLVSLRSLAISDCHNLSYLPEGLQRL 357
            + T LP  +QH+TTL++L +   PGL +LPEW+ENL  LR L+I DC NL+ LP  +Q L
Sbjct: 1024 KFTSLPVGIQHMTTLRDLHLLDFPGLQTLPEWIENLKLLRELSIWDCPNLTSLPNAMQHL 1083

Query: 358  SALQHMSIQECPSLEKRCERIRGEDWKKISHIPHIYIGSLGLAQQDI 498
            ++L+ +SI +CP+LEKRC++  GEDW KI H+P I I    +  + I
Sbjct: 1084 TSLEFLSIWKCPNLEKRCKKEEGEDWHKIKHVPDIEIKDQEIRMEQI 1130



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 38/113 (33%), Positives = 60/113 (53%)
 Frame = +1

Query: 61   RSLKSLEHLTIMYCPKLATFPVDMQHLTTLRSLNILSCPELTCLPEELQHVTTLQNLEIR 240
            ++L  ++ L +  CPKL   P   ++L++L  L +    E+  L   L  +T+L  L I 
Sbjct: 847  QALTRVKKLVVKGCPKLRNMP---RNLSSLEELELSDSNEM--LLRVLPSLTSLATLRIS 901

Query: 241  SSPGLISLPEWVENLVSLRSLAISDCHNLSYLPEGLQRLSALQHMSIQECPSL 399
                +ISL   VENL +L+SL I  C  L +LP G+  L++L  + I  C +L
Sbjct: 902  EFSEVISLEREVENLTNLKSLHIKMCDKLVFLPRGISNLTSLGVLGIWSCSTL 954


>ref|XP_002336038.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222839627|gb|EEE77950.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1052

 Score =  143 bits (361), Expect = 5e-32
 Identities = 75/157 (47%), Positives = 100/157 (63%), Gaps = 1/157 (0%)
 Frame = +1

Query: 1    ALRNLSIENCNSLKCLPMV-MRSLKSLEHLTIMYCPKLATFPVDMQHLTTLRSLNILSCP 177
            +L  L I +C  L  LPM  +  L SL HL+I YC + A+    +QHLT L  LN+  CP
Sbjct: 890  SLEVLEIWSCRRLNSLPMNGLCGLSSLRHLSIHYCNQFASLSEGVQHLTALEDLNLSHCP 949

Query: 178  ELTCLPEELQHVTTLQNLEIRSSPGLISLPEWVENLVSLRSLAISDCHNLSYLPEGLQRL 357
            EL  LPE +QH+++L++L I+   GL SLP+ +  L SL SL I  C NL   P+G+Q L
Sbjct: 950  ELNSLPESIQHLSSLRSLSIQYCTGLTSLPDQIGYLTSLSSLNIRGCSNLVSFPDGVQTL 1009

Query: 358  SALQHMSIQECPSLEKRCERIRGEDWKKISHIPHIYI 468
            + L  + I  CP+LEKRCE+ RGEDW KI+HI +I I
Sbjct: 1010 NNLSKLIINNCPNLEKRCEKGRGEDWPKIAHIHNIII 1046


Top