BLASTX nr result
ID: Coptis25_contig00026184
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00026184
(911 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002317122.1| nbs-lrr resistance protein [Populus trichoca... 206 6e-51
ref|XP_002316539.1| nbs-lrr resistance protein [Populus trichoca... 172 1e-40
ref|XP_002302960.1| cc-nbs-lrr resistance protein [Populus trich... 146 7e-33
ref|XP_002525457.1| leucine-rich repeat containing protein, puta... 144 2e-32
ref|XP_002336038.1| cc-nbs-lrr resistance protein [Populus trich... 143 5e-32
>ref|XP_002317122.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|222860187|gb|EEE97734.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 1234
Score = 206 bits (524), Expect = 6e-51
Identities = 105/172 (61%), Positives = 126/172 (73%), Gaps = 1/172 (0%)
Frame = +1
Query: 1 ALRNLSIENCNSLKCLPMVMRSLKSLEHLTIMYCPKLATFPVDMQHLTTLRSLNILSCPE 180
+LR+LSIENC+SL LP M+ +LE LTIMYC L + P +QHL+ L+SL+ILSC
Sbjct: 1061 SLRSLSIENCHSLTSLPSRMQHATALERLTIMYCSNLVSLPNGLQHLSALKSLSILSCTG 1120
Query: 181 LTCLPEELQHVTTLQNLEIRSSPGLISLPEWVENLVSLRSLAISDCHNLSYLPEGLQRLS 360
L LPE LQ +TTLQNLEI P ++ LP WVENLVSLRSL ISDC N+ P+GLQRL
Sbjct: 1121 LASLPEGLQFITTLQNLEIHDCPEVMELPAWVENLVSLRSLTISDCQNIKSFPQGLQRLR 1180
Query: 361 ALQHMSIQECPSLEKRCERIRGEDWKKISHIPHIYIGSLGLAQ-QDIASSSS 513
ALQH+SI+ CP LEKRC+R G DW KISH P+IY+G L Q +D ASSSS
Sbjct: 1181 ALQHLSIRGCPELEKRCQRGNGVDWHKISHTPYIYVGLSTLQQRRDTASSSS 1232
Score = 86.7 bits (213), Expect = 7e-15
Identities = 47/106 (44%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Frame = +1
Query: 85 LTIMYCPKLATFPVDMQHLTTLRSLNILSCPELTCLPEELQHVTTLQNLEIRSSPGLISL 264
LTI +CPKL + P ++ L L+ L I EL LP L ++T+L++LEI P L+SL
Sbjct: 992 LTISFCPKLRSLPANVGQLQNLKFLRIGWFQELHSLPHGLTNLTSLESLEIIECPNLVSL 1051
Query: 265 P-EWVENLVSLRSLAISDCHNLSYLPEGLQRLSALQHMSIQECPSL 399
P E +E L SLRSL+I +CH+L+ LP +Q +AL+ ++I C +L
Sbjct: 1052 PEESLEGLSSLRSLSIENCHSLTSLPSRMQHATALERLTIMYCSNL 1097
Score = 59.7 bits (143), Expect = 9e-07
Identities = 48/136 (35%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Frame = +1
Query: 4 LRNLSIENCNSLKCLPMVMRSLKSLEHLTIMYCPKLATFPVDMQHLTTLRSLNIL---SC 174
L L+I NC L +P SL+H+ I C PV ++ + LRS++ L +
Sbjct: 922 LNKLTIINCPVLITMPW----FPSLQHVEIRNC-----HPVMLRSVAQLRSISTLIIGNF 972
Query: 175 PELTCLPEEL-QHVTTLQNLEIRSSPGLISLPEWVENLVSLRSLAISDCHNLSYLPEGLQ 351
PEL +P+ L ++ L +L I P L SLP V L +L+ L I L LP GL
Sbjct: 973 PELLYIPKALIENNLLLLSLTISFCPKLRSLPANVGQLQNLKFLRIGWFQELHSLPHGLT 1032
Query: 352 RLSALQHMSIQECPSL 399
L++L+ + I ECP+L
Sbjct: 1033 NLTSLESLEIIECPNL 1048
>ref|XP_002316539.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|222859604|gb|EEE97151.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 1065
Score = 172 bits (436), Expect = 1e-40
Identities = 89/164 (54%), Positives = 108/164 (65%)
Frame = +1
Query: 1 ALRNLSIENCNSLKCLPMVMRSLKSLEHLTIMYCPKLATFPVDMQHLTTLRSLNILSCPE 180
+LR+LSIENC+SL LP M+ +LE LTIMYC L + P +QHL+ L+SL+ILSC
Sbjct: 918 SLRSLSIENCHSLTSLPSRMQHATALERLTIMYCSNLVSLPNGLQHLSALKSLSILSCTG 977
Query: 181 LTCLPEELQHVTTLQNLEIRSSPGLISLPEWVENLVSLRSLAISDCHNLSYLPEGLQRLS 360
L LPE LQ +TTLQNLEI PG++ LP WVENLVSLRSL ISDC N+
Sbjct: 978 LASLPEGLQFITTLQNLEIHDCPGVMELPAWVENLVSLRSLTISDCQNI----------- 1026
Query: 361 ALQHMSIQECPSLEKRCERIRGEDWKKISHIPHIYIGSLGLAQQ 492
CP LEKRC+R G DW+KISH P+IY+GS L Q+
Sbjct: 1027 ---------CPELEKRCQRGNGVDWQKISHTPYIYVGSSTLQQR 1061
>ref|XP_002302960.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222844686|gb|EEE82233.1| cc-nbs-lrr resistance protein
[Populus trichocarpa]
Length = 1091
Score = 146 bits (368), Expect = 7e-33
Identities = 76/156 (48%), Positives = 97/156 (62%)
Frame = +1
Query: 1 ALRNLSIENCNSLKCLPMVMRSLKSLEHLTIMYCPKLATFPVDMQHLTTLRSLNILSCPE 180
+L LSI C L LPM L SL L+I YC + A+ ++HLT L L++ CPE
Sbjct: 932 SLEVLSINGCGRLNSLPM--NCLSSLRRLSIKYCDQFASLSEGVRHLTALEDLSLFGCPE 989
Query: 181 LTCLPEELQHVTTLQNLEIRSSPGLISLPEWVENLVSLRSLAISDCHNLSYLPEGLQRLS 360
L LPE +QH+T+L++L I GL SLP + L SL SL I C NL P+G+Q LS
Sbjct: 990 LNSLPESIQHLTSLRSLSIWYCKGLTSLPYQIGYLTSLSSLKIRGCPNLMSFPDGVQSLS 1049
Query: 361 ALQHMSIQECPSLEKRCERIRGEDWKKISHIPHIYI 468
L ++I ECP+LEKRC + RGEDW KI+HIP I I
Sbjct: 1050 KLSKLTIDECPNLEKRCAKKRGEDWPKIAHIPSIQI 1085
>ref|XP_002525457.1| leucine-rich repeat containing protein, putative [Ricinus communis]
gi|223535270|gb|EEF36947.1| leucine-rich repeat
containing protein, putative [Ricinus communis]
Length = 1177
Score = 144 bits (364), Expect = 2e-32
Identities = 76/167 (45%), Positives = 109/167 (65%), Gaps = 1/167 (0%)
Frame = +1
Query: 1 ALRNLSIENCNSLKCLPMVMRSLKSLEHLTIMYCPKLA-TFPVDMQHLTTLRSLNILSCP 177
+LR L+I NC L L ++ L +LE L I+ CPK+ D+Q+ T+L+SL I C
Sbjct: 965 SLRELTILNCCMLSSLAG-LQHLTALEKLCIVGCPKMVHLMEEDVQNFTSLQSLTISHCF 1023
Query: 178 ELTCLPEELQHVTTLQNLEIRSSPGLISLPEWVENLVSLRSLAISDCHNLSYLPEGLQRL 357
+ T LP +QH+TTL++L + PGL +LPEW+ENL LR L+I DC NL+ LP +Q L
Sbjct: 1024 KFTSLPVGIQHMTTLRDLHLLDFPGLQTLPEWIENLKLLRELSIWDCPNLTSLPNAMQHL 1083
Query: 358 SALQHMSIQECPSLEKRCERIRGEDWKKISHIPHIYIGSLGLAQQDI 498
++L+ +SI +CP+LEKRC++ GEDW KI H+P I I + + I
Sbjct: 1084 TSLEFLSIWKCPNLEKRCKKEEGEDWHKIKHVPDIEIKDQEIRMEQI 1130
Score = 58.9 bits (141), Expect = 2e-06
Identities = 38/113 (33%), Positives = 60/113 (53%)
Frame = +1
Query: 61 RSLKSLEHLTIMYCPKLATFPVDMQHLTTLRSLNILSCPELTCLPEELQHVTTLQNLEIR 240
++L ++ L + CPKL P ++L++L L + E+ L L +T+L L I
Sbjct: 847 QALTRVKKLVVKGCPKLRNMP---RNLSSLEELELSDSNEM--LLRVLPSLTSLATLRIS 901
Query: 241 SSPGLISLPEWVENLVSLRSLAISDCHNLSYLPEGLQRLSALQHMSIQECPSL 399
+ISL VENL +L+SL I C L +LP G+ L++L + I C +L
Sbjct: 902 EFSEVISLEREVENLTNLKSLHIKMCDKLVFLPRGISNLTSLGVLGIWSCSTL 954
>ref|XP_002336038.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222839627|gb|EEE77950.1| cc-nbs-lrr resistance protein
[Populus trichocarpa]
Length = 1052
Score = 143 bits (361), Expect = 5e-32
Identities = 75/157 (47%), Positives = 100/157 (63%), Gaps = 1/157 (0%)
Frame = +1
Query: 1 ALRNLSIENCNSLKCLPMV-MRSLKSLEHLTIMYCPKLATFPVDMQHLTTLRSLNILSCP 177
+L L I +C L LPM + L SL HL+I YC + A+ +QHLT L LN+ CP
Sbjct: 890 SLEVLEIWSCRRLNSLPMNGLCGLSSLRHLSIHYCNQFASLSEGVQHLTALEDLNLSHCP 949
Query: 178 ELTCLPEELQHVTTLQNLEIRSSPGLISLPEWVENLVSLRSLAISDCHNLSYLPEGLQRL 357
EL LPE +QH+++L++L I+ GL SLP+ + L SL SL I C NL P+G+Q L
Sbjct: 950 ELNSLPESIQHLSSLRSLSIQYCTGLTSLPDQIGYLTSLSSLNIRGCSNLVSFPDGVQTL 1009
Query: 358 SALQHMSIQECPSLEKRCERIRGEDWKKISHIPHIYI 468
+ L + I CP+LEKRCE+ RGEDW KI+HI +I I
Sbjct: 1010 NNLSKLIINNCPNLEKRCEKGRGEDWPKIAHIHNIII 1046