BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026178
         (1485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_565285.1| AAA-type ATPase-like protein [Arabidopsis thali...   159   1e-36
gb|AFN58239.1| trichome branching-like protein [Gossypium arboreum]   159   2e-36
ref|XP_002875130.1| hypothetical protein ARALYDRAFT_484163 [Arab...   159   2e-36
ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|2...   158   3e-36
ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793...   157   7e-36

>ref|NP_565285.1| AAA-type ATPase-like protein [Arabidopsis thaliana]
            gi|8980710|gb|AAF82285.1|AF264023_1 STICHEL [Arabidopsis
            thaliana] gi|20197093|gb|AAC18938.2| similar to
            prokaryotic DNA polymerase III gamma subunit [Arabidopsis
            thaliana] gi|330250491|gb|AEC05585.1| AAA-type
            ATPase-like protein [Arabidopsis thaliana]
          Length = 1218

 Score =  159 bits (403), Expect = 1e-36
 Identities = 84/187 (44%), Positives = 119/187 (63%), Gaps = 7/187 (3%)
 Frame = -3

Query: 544  SLSSKYQPKLFEDIAGHEILVKALSNAVQKERIAPLYLFHGPSGTGKTSTARIFSMALNC 365
            S S KY+P  FE++ G  I+V++L NAV++ RIAP+YLF GP GTGKTSTARIFS ALNC
Sbjct: 450  SFSQKYRPMFFEELIGQSIVVQSLMNAVKRSRIAPVYLFQGPRGTGKTSTARIFSAALNC 509

Query: 364  ESSTHTKPCWSCRGCT-----RSLYIMDLCSGSRITGFERIRTLIQS--TTFTQIDTGFK 206
             ++   KPC  C+ C      +S    +L  G+   G +++R L+++  T   +  + +K
Sbjct: 510  VATEEMKPCGYCKECNDFMSGKSKDFWEL-DGANKKGADKVRYLLKNLPTILPRNSSMYK 568

Query: 205  VFIIEECHSLTPEAWEEILSIVERAPSSTMVFVMITEDVNMVPKGISSRCQKFCFPKLKG 26
            VF+I+ECH L  + W   L  +E  P   +VF+ IT D+  VP+ I SRCQKF F KLK 
Sbjct: 569  VFVIDECHLLPSKTWLSFLKFLEN-PLQKVVFIFITTDLENVPRTIQSRCQKFLFDKLKD 627

Query: 25   MDIILKL 5
             DI+++L
Sbjct: 628  SDIVVRL 634


>gb|AFN58239.1| trichome branching-like protein [Gossypium arboreum]
          Length = 1223

 Score =  159 bits (401), Expect = 2e-36
 Identities = 84/189 (44%), Positives = 117/189 (61%), Gaps = 9/189 (4%)
 Frame = -3

Query: 544  SLSSKYQPKLFEDIAGHEILVKALSNAVQKERIAPLYLFHGPSGTGKTSTARIFSMALNC 365
            SLS KY+P  F+++ G  I+V++L NAV K RIAP YLF GP GTGKTSTARIFS ALNC
Sbjct: 461  SLSQKYKPMFFDELIGQNIVVQSLMNAVSKGRIAPFYLFQGPRGTGKTSTARIFSAALNC 520

Query: 364  ESSTHTKPCWSCRGCT-------RSLYIMDLCSGSRITGFERIRTLIQ--STTFTQIDTG 212
            +++   KPC  C  CT       R  +  D    +   G +R+R L++  ST      + 
Sbjct: 521  QTTDDDKPCGCCTECTEFTSGKRREFWEFD---STNRRGIDRVRYLLKSLSTGLASSSSR 577

Query: 211  FKVFIIEECHSLTPEAWEEILSIVERAPSSTMVFVMITEDVNMVPKGISSRCQKFCFPKL 32
            +KVF+I+ECH L  + W  +L  +E  P   +VF+ IT D++ VP+ + SRCQK+ F K+
Sbjct: 578  YKVFVIDECHLLPSKIWLALLKFLE-DPPPRLVFIFITTDLDNVPRTVQSRCQKYLFNKI 636

Query: 31   KGMDIILKL 5
            K  DI+ +L
Sbjct: 637  KDCDIMARL 645


>ref|XP_002875130.1| hypothetical protein ARALYDRAFT_484163 [Arabidopsis lyrata subsp.
            lyrata] gi|297320968|gb|EFH51389.1| hypothetical protein
            ARALYDRAFT_484163 [Arabidopsis lyrata subsp. lyrata]
          Length = 1222

 Score =  159 bits (401), Expect = 2e-36
 Identities = 84/187 (44%), Positives = 119/187 (63%), Gaps = 7/187 (3%)
 Frame = -3

Query: 544  SLSSKYQPKLFEDIAGHEILVKALSNAVQKERIAPLYLFHGPSGTGKTSTARIFSMALNC 365
            S S KY+P  FE++ G  I+V++L NAV++ RIAP+YLF GP GTGKTSTARIFS ALNC
Sbjct: 454  SFSQKYRPMFFEELIGQSIVVQSLMNAVKRSRIAPVYLFQGPRGTGKTSTARIFSAALNC 513

Query: 364  ESSTHTKPCWSCRGCT-----RSLYIMDLCSGSRITGFERIRTLIQS--TTFTQIDTGFK 206
             ++   KPC  C+ C      +S    +L  G+   G +++R L+++  T   +  + +K
Sbjct: 514  VATEEMKPCGYCKECNEFMSGKSKDFWEL-DGANKKGADKVRYLLKNLPTILPRNSSMYK 572

Query: 205  VFIIEECHSLTPEAWEEILSIVERAPSSTMVFVMITEDVNMVPKGISSRCQKFCFPKLKG 26
            VF+I+ECH L  + W   L  +E  P   +VF+ IT D+  VP+ I SRCQKF F KLK 
Sbjct: 573  VFVIDECHLLPLKTWLSFLKFLEN-PLQKVVFIFITTDLENVPRTIQSRCQKFLFDKLKD 631

Query: 25   MDIILKL 5
             DI+++L
Sbjct: 632  SDIVVRL 638


>ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|222848688|gb|EEE86235.1|
           predicted protein [Populus trichocarpa]
          Length = 1188

 Score =  158 bits (400), Expect = 3e-36
 Identities = 81/185 (43%), Positives = 117/185 (63%), Gaps = 5/185 (2%)
 Frame = -3

Query: 544 SLSSKYQPKLFEDIAGHEILVKALSNAVQKERIAPLYLFHGPSGTGKTSTARIFSMALNC 365
           +L+ KY P+ F D+ G  ++ +ALSNAV + ++  LY+F+GP GTGKTS ARIF+ ALNC
Sbjct: 449 NLTQKYMPRTFRDLVGQNLVAQALSNAVSRRKVGLLYVFYGPHGTGKTSCARIFARALNC 508

Query: 364 ESSTHTKPCWSCRGCT-----RSLYIMDLCSGSRITGFERIRTLIQSTTFTQIDTGFKVF 200
           +S  H KPC  C  C      +S  I ++   S    FE I  L+ +    QI + ++VF
Sbjct: 509 QSLEHPKPCGFCNSCISHDMGKSRNIREVGPVSNF-DFESIMDLLDNMIVYQIPSLYRVF 567

Query: 199 IIEECHSLTPEAWEEILSIVERAPSSTMVFVMITEDVNMVPKGISSRCQKFCFPKLKGMD 20
           I ++C SL+P+ W  IL +++RAP   +VFV++   ++++P  I SRCQKF FPKLK  D
Sbjct: 568 IFDDCDSLSPDCWSAILKVIDRAP-RRVVFVLVCSSLDVLPHIIISRCQKFFFPKLKDAD 626

Query: 19  IILKL 5
           II  L
Sbjct: 627 IIYTL 631


>ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max]
          Length = 1191

 Score =  157 bits (397), Expect = 7e-36
 Identities = 79/185 (42%), Positives = 119/185 (64%), Gaps = 5/185 (2%)
 Frame = -3

Query: 544  SLSSKYQPKLFEDIAGHEILVKALSNAVQKERIAPLYLFHGPSGTGKTSTARIFSMALNC 365
            SL+ KY P+ F D+ G  ++ +ALSNAV K+++  LY+F+GP GTGKTS+ARIF+ ALNC
Sbjct: 457  SLTQKYMPRTFRDMVGQNLVAQALSNAVMKKKVGLLYVFYGPHGTGKTSSARIFARALNC 516

Query: 364  ESSTHTKPCWSCRGCT-----RSLYIMDLCSGSRITGFERIRTLIQSTTFTQIDTGFKVF 200
             SS H KPC  C  C      +S  I ++   S    FE I  L+ +   +Q+ + ++VF
Sbjct: 517  NSSEHPKPCGFCNYCVAHDMGKSRNIREVGPVSNF-DFESIMELLDNMIVSQLPSHYRVF 575

Query: 199  IIEECHSLTPEAWEEILSIVERAPSSTMVFVMITEDVNMVPKGISSRCQKFCFPKLKGMD 20
            I ++C +L+ + W  I  +++RAP   +VF++++  ++++P  I SRCQKF FPKLK  D
Sbjct: 576  IFDDCDTLSTDCWNAISKVIDRAP-RRVVFILVSSSLDVLPHIIISRCQKFFFPKLKDAD 634

Query: 19   IILKL 5
            II  L
Sbjct: 635  IIYTL 639