BLASTX nr result
ID: Coptis25_contig00026178
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00026178 (1485 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_565285.1| AAA-type ATPase-like protein [Arabidopsis thali... 159 1e-36 gb|AFN58239.1| trichome branching-like protein [Gossypium arboreum] 159 2e-36 ref|XP_002875130.1| hypothetical protein ARALYDRAFT_484163 [Arab... 159 2e-36 ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|2... 158 3e-36 ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793... 157 7e-36 >ref|NP_565285.1| AAA-type ATPase-like protein [Arabidopsis thaliana] gi|8980710|gb|AAF82285.1|AF264023_1 STICHEL [Arabidopsis thaliana] gi|20197093|gb|AAC18938.2| similar to prokaryotic DNA polymerase III gamma subunit [Arabidopsis thaliana] gi|330250491|gb|AEC05585.1| AAA-type ATPase-like protein [Arabidopsis thaliana] Length = 1218 Score = 159 bits (403), Expect = 1e-36 Identities = 84/187 (44%), Positives = 119/187 (63%), Gaps = 7/187 (3%) Frame = -3 Query: 544 SLSSKYQPKLFEDIAGHEILVKALSNAVQKERIAPLYLFHGPSGTGKTSTARIFSMALNC 365 S S KY+P FE++ G I+V++L NAV++ RIAP+YLF GP GTGKTSTARIFS ALNC Sbjct: 450 SFSQKYRPMFFEELIGQSIVVQSLMNAVKRSRIAPVYLFQGPRGTGKTSTARIFSAALNC 509 Query: 364 ESSTHTKPCWSCRGCT-----RSLYIMDLCSGSRITGFERIRTLIQS--TTFTQIDTGFK 206 ++ KPC C+ C +S +L G+ G +++R L+++ T + + +K Sbjct: 510 VATEEMKPCGYCKECNDFMSGKSKDFWEL-DGANKKGADKVRYLLKNLPTILPRNSSMYK 568 Query: 205 VFIIEECHSLTPEAWEEILSIVERAPSSTMVFVMITEDVNMVPKGISSRCQKFCFPKLKG 26 VF+I+ECH L + W L +E P +VF+ IT D+ VP+ I SRCQKF F KLK Sbjct: 569 VFVIDECHLLPSKTWLSFLKFLEN-PLQKVVFIFITTDLENVPRTIQSRCQKFLFDKLKD 627 Query: 25 MDIILKL 5 DI+++L Sbjct: 628 SDIVVRL 634 >gb|AFN58239.1| trichome branching-like protein [Gossypium arboreum] Length = 1223 Score = 159 bits (401), Expect = 2e-36 Identities = 84/189 (44%), Positives = 117/189 (61%), Gaps = 9/189 (4%) Frame = -3 Query: 544 SLSSKYQPKLFEDIAGHEILVKALSNAVQKERIAPLYLFHGPSGTGKTSTARIFSMALNC 365 SLS KY+P F+++ G I+V++L NAV K RIAP YLF GP GTGKTSTARIFS ALNC Sbjct: 461 SLSQKYKPMFFDELIGQNIVVQSLMNAVSKGRIAPFYLFQGPRGTGKTSTARIFSAALNC 520 Query: 364 ESSTHTKPCWSCRGCT-------RSLYIMDLCSGSRITGFERIRTLIQ--STTFTQIDTG 212 +++ KPC C CT R + D + G +R+R L++ ST + Sbjct: 521 QTTDDDKPCGCCTECTEFTSGKRREFWEFD---STNRRGIDRVRYLLKSLSTGLASSSSR 577 Query: 211 FKVFIIEECHSLTPEAWEEILSIVERAPSSTMVFVMITEDVNMVPKGISSRCQKFCFPKL 32 +KVF+I+ECH L + W +L +E P +VF+ IT D++ VP+ + SRCQK+ F K+ Sbjct: 578 YKVFVIDECHLLPSKIWLALLKFLE-DPPPRLVFIFITTDLDNVPRTVQSRCQKYLFNKI 636 Query: 31 KGMDIILKL 5 K DI+ +L Sbjct: 637 KDCDIMARL 645 >ref|XP_002875130.1| hypothetical protein ARALYDRAFT_484163 [Arabidopsis lyrata subsp. lyrata] gi|297320968|gb|EFH51389.1| hypothetical protein ARALYDRAFT_484163 [Arabidopsis lyrata subsp. lyrata] Length = 1222 Score = 159 bits (401), Expect = 2e-36 Identities = 84/187 (44%), Positives = 119/187 (63%), Gaps = 7/187 (3%) Frame = -3 Query: 544 SLSSKYQPKLFEDIAGHEILVKALSNAVQKERIAPLYLFHGPSGTGKTSTARIFSMALNC 365 S S KY+P FE++ G I+V++L NAV++ RIAP+YLF GP GTGKTSTARIFS ALNC Sbjct: 454 SFSQKYRPMFFEELIGQSIVVQSLMNAVKRSRIAPVYLFQGPRGTGKTSTARIFSAALNC 513 Query: 364 ESSTHTKPCWSCRGCT-----RSLYIMDLCSGSRITGFERIRTLIQS--TTFTQIDTGFK 206 ++ KPC C+ C +S +L G+ G +++R L+++ T + + +K Sbjct: 514 VATEEMKPCGYCKECNEFMSGKSKDFWEL-DGANKKGADKVRYLLKNLPTILPRNSSMYK 572 Query: 205 VFIIEECHSLTPEAWEEILSIVERAPSSTMVFVMITEDVNMVPKGISSRCQKFCFPKLKG 26 VF+I+ECH L + W L +E P +VF+ IT D+ VP+ I SRCQKF F KLK Sbjct: 573 VFVIDECHLLPLKTWLSFLKFLEN-PLQKVVFIFITTDLENVPRTIQSRCQKFLFDKLKD 631 Query: 25 MDIILKL 5 DI+++L Sbjct: 632 SDIVVRL 638 >ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|222848688|gb|EEE86235.1| predicted protein [Populus trichocarpa] Length = 1188 Score = 158 bits (400), Expect = 3e-36 Identities = 81/185 (43%), Positives = 117/185 (63%), Gaps = 5/185 (2%) Frame = -3 Query: 544 SLSSKYQPKLFEDIAGHEILVKALSNAVQKERIAPLYLFHGPSGTGKTSTARIFSMALNC 365 +L+ KY P+ F D+ G ++ +ALSNAV + ++ LY+F+GP GTGKTS ARIF+ ALNC Sbjct: 449 NLTQKYMPRTFRDLVGQNLVAQALSNAVSRRKVGLLYVFYGPHGTGKTSCARIFARALNC 508 Query: 364 ESSTHTKPCWSCRGCT-----RSLYIMDLCSGSRITGFERIRTLIQSTTFTQIDTGFKVF 200 +S H KPC C C +S I ++ S FE I L+ + QI + ++VF Sbjct: 509 QSLEHPKPCGFCNSCISHDMGKSRNIREVGPVSNF-DFESIMDLLDNMIVYQIPSLYRVF 567 Query: 199 IIEECHSLTPEAWEEILSIVERAPSSTMVFVMITEDVNMVPKGISSRCQKFCFPKLKGMD 20 I ++C SL+P+ W IL +++RAP +VFV++ ++++P I SRCQKF FPKLK D Sbjct: 568 IFDDCDSLSPDCWSAILKVIDRAP-RRVVFVLVCSSLDVLPHIIISRCQKFFFPKLKDAD 626 Query: 19 IILKL 5 II L Sbjct: 627 IIYTL 631 >ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max] Length = 1191 Score = 157 bits (397), Expect = 7e-36 Identities = 79/185 (42%), Positives = 119/185 (64%), Gaps = 5/185 (2%) Frame = -3 Query: 544 SLSSKYQPKLFEDIAGHEILVKALSNAVQKERIAPLYLFHGPSGTGKTSTARIFSMALNC 365 SL+ KY P+ F D+ G ++ +ALSNAV K+++ LY+F+GP GTGKTS+ARIF+ ALNC Sbjct: 457 SLTQKYMPRTFRDMVGQNLVAQALSNAVMKKKVGLLYVFYGPHGTGKTSSARIFARALNC 516 Query: 364 ESSTHTKPCWSCRGCT-----RSLYIMDLCSGSRITGFERIRTLIQSTTFTQIDTGFKVF 200 SS H KPC C C +S I ++ S FE I L+ + +Q+ + ++VF Sbjct: 517 NSSEHPKPCGFCNYCVAHDMGKSRNIREVGPVSNF-DFESIMELLDNMIVSQLPSHYRVF 575 Query: 199 IIEECHSLTPEAWEEILSIVERAPSSTMVFVMITEDVNMVPKGISSRCQKFCFPKLKGMD 20 I ++C +L+ + W I +++RAP +VF++++ ++++P I SRCQKF FPKLK D Sbjct: 576 IFDDCDTLSTDCWNAISKVIDRAP-RRVVFILVSSSLDVLPHIIISRCQKFFFPKLKDAD 634 Query: 19 IILKL 5 II L Sbjct: 635 IIYTL 639