BLASTX nr result

ID: Coptis25_contig00026167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026167
         (969 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|2...    49   5e-10
ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|2...    52   8e-10
ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|2...    49   1e-09
ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220...    66   1e-08
ref|XP_003604531.1| hypothetical protein MTR_4g014190 [Medicago ...    45   2e-08

>ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|222838784|gb|EEE77135.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 49.3 bits (116), Expect(2) = 5e-10
 Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
 Frame = -3

Query: 247 YARVCIEIDSECPYPEDIPVVLDQRRAYKVAFEYNWKPPS-CSKCKVFGHTEQSCPKK 77
           +ARVC+E+D +   P+ + +  D+  +Y    EY W+P S CS C   GH++ SCP++
Sbjct: 169 FARVCVEVDFDKMLPDSVTIEDDKGYSYDQKVEYEWQPTSRCSYCLHLGHSD-SCPRR 225



 Score = 41.6 bits (96), Expect(2) = 5e-10
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = -2

Query: 401 ETRELKTIPIWVIVKGLPMEMWNKNGFSQVGSAIGVPMFTD 279
           E +ELK+ P+W+ +  L + +W+    S++ S +G P+F D
Sbjct: 118 EIKELKSAPVWIKLPNLRLHLWSPEALSKIASLVGRPLFAD 158


>ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|222874005|gb|EEF11136.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score = 51.6 bits (122), Expect(2) = 8e-10
 Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = -3

Query: 247 YARVCIEIDSECPYPEDIPVVLDQRRAYKVAFEYNWKPPS-CSKCKVFGHTEQSCPKK 77
           +ARVC+E+D +   P+ I +  D+  +Y    EY W+P S CS C  FGH++ SCP++
Sbjct: 169 FARVCVEVDFDKMLPDSITIEDDKGYSYDQKVEYEWQPTSRCSFCLHFGHSD-SCPRR 225



 Score = 38.5 bits (88), Expect(2) = 8e-10
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -2

Query: 401 ETRELKTIPIWVIVKGLPMEMWNKNGFSQVGSAIGVPMFTD 279
           E  ELK+ PIW+ +  L + +W+     ++ S +G P+F D
Sbjct: 118 EIEELKSAPIWIKLPNLRLHLWSPEALGKIVSLVGRPLFAD 158


>ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|222874002|gb|EEF11133.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 49.3 bits (116), Expect(2) = 1e-09
 Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
 Frame = -3

Query: 247 YARVCIEIDSECPYPEDIPVVLDQRRAYKVAFEYNWKPPS-CSKCKVFGHTEQSCPKK 77
           +ARVC+E+D +   P+ + +  D+  +Y    EY W+P S CS C   GH++ SCP++
Sbjct: 169 FARVCVEVDFDKMLPDSVTIEDDKGYSYDQKVEYEWQPTSRCSYCLHLGHSD-SCPRR 225



 Score = 40.4 bits (93), Expect(2) = 1e-09
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = -2

Query: 401 ETRELKTIPIWVIVKGLPMEMWNKNGFSQVGSAIGVPMFTD 279
           E +ELK+ PIW+ +  L + +W+     ++ S +G P+F D
Sbjct: 118 EIKELKSAPIWIKLPNLRLHLWSPEALGKIASLVGRPLFAD 158


>ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis
           sativus]
          Length = 169

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
 Frame = -3

Query: 349 LWR-CGIKMASAKWGVPLESQCSLIDFTENMARTSYARVCIEIDSECPYPEDIPVVLDQR 173
           LW   G+ + ++  G PL    +    T+   R SYAR+C+E++ +   P +I V L + 
Sbjct: 64  LWTDAGLVVVASAIGKPLSVDLA----TKERCRLSYARICVELNVDSTMPIEITVNL-RG 118

Query: 172 RAYKVAFEYNWKPPSCSKCKVFGHTEQSCPKKPQIEVTTKQVWLKKQEKEE 20
             + V   Y WKP  C+ C  FGH++ +CPKK +IE   K+   K+   +E
Sbjct: 119 EEFIVPVTYEWKPRKCNLCHSFGHSQSTCPKKIEIEDNKKEAVGKEDPVKE 169


>ref|XP_003604531.1| hypothetical protein MTR_4g014190 [Medicago truncatula]
           gi|355505586|gb|AES86728.1| hypothetical protein
           MTR_4g014190 [Medicago truncatula]
          Length = 382

 Score = 44.7 bits (104), Expect(2) = 2e-08
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
 Frame = -3

Query: 271 TENMARTSYARVCIEIDSECPYPEDIPVVLDQRRAYKVAFEYNWKPPSCSKCKVFGHTEQ 92
           T   +R SYAR+ +EID   P    + V     + ++    Y+W+P  C KC+  GH   
Sbjct: 252 TSKQSRISYARLLVEIDVTRPLLYKVMVESPDGKCFEQRIVYDWEPSFCKKCQQVGHV-- 309

Query: 91  SCPKKP-QIEVTTKQVWLKKQE 29
            C K+  Q     K+ W+ K +
Sbjct: 310 -CDKQSFQPVERPKKDWIPKTQ 330



 Score = 40.8 bits (94), Expect(2) = 2e-08
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = -2

Query: 389 LKTIPIWVIVKGLPMEMWNKNGFSQVGSAIGVPMFTD 279
           LK +P+W+ +  LP+  W  +  S++GS +G P+F D
Sbjct: 213 LKVVPLWIQLPNLPLTCWGLDFLSRIGSTLGNPLFAD 249


Top