BLASTX nr result

ID: Coptis25_contig00026164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026164
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277099.1| PREDICTED: uncharacterized protein LOC100244...   100   2e-19
emb|CAN82730.1| hypothetical protein VITISV_035708 [Vitis vinifera]   100   2e-19
ref|XP_002874600.1| hypothetical protein ARALYDRAFT_911277 [Arab...    92   6e-17
ref|XP_002327378.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|NP_567349.1| thioredoxin family protein [Arabidopsis thalian...    90   2e-16

>ref|XP_002277099.1| PREDICTED: uncharacterized protein LOC100244724 [Vitis vinifera]
           gi|297741048|emb|CBI31360.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/76 (65%), Positives = 57/76 (75%)
 Frame = -2

Query: 229 TENQQSTSFLSLLCPLLKVFAASDPSQERNTYLEVATSSLSSLARFPWGSRSIYGNSPDP 50
           T    STSFLS+LCPLLK+F+A DPSQERN  LEVATSSLS+L+RFPWGSRS+  +S   
Sbjct: 82  TGTTPSTSFLSVLCPLLKLFSAGDPSQERNYLLEVATSSLSTLSRFPWGSRSLSDSSQSE 141

Query: 49  EIAAEDPQVHLQLFEF 2
           E    DP   LQLFEF
Sbjct: 142 EATTVDPPTRLQLFEF 157


>emb|CAN82730.1| hypothetical protein VITISV_035708 [Vitis vinifera]
          Length = 381

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/76 (65%), Positives = 57/76 (75%)
 Frame = -2

Query: 229 TENQQSTSFLSLLCPLLKVFAASDPSQERNTYLEVATSSLSSLARFPWGSRSIYGNSPDP 50
           T    STSFLS+LCPLLK+F+A DPSQERN  LEVATSSLS+L+RFPWGSRS+  +S   
Sbjct: 82  TGTTPSTSFLSVLCPLLKLFSAGDPSQERNYLLEVATSSLSTLSRFPWGSRSLSDSSQSE 141

Query: 49  EIAAEDPQVHLQLFEF 2
           E    DP   LQLFEF
Sbjct: 142 EATTVDPPTRLQLFEF 157


>ref|XP_002874600.1| hypothetical protein ARALYDRAFT_911277 [Arabidopsis lyrata subsp.
           lyrata] gi|297320437|gb|EFH50859.1| hypothetical protein
           ARALYDRAFT_911277 [Arabidopsis lyrata subsp. lyrata]
          Length = 336

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
 Frame = -2

Query: 352 FPSCKLYCFPNKKSKNHYY-----KIVAKSSNSEKNGHLTTAPVLETENQQSTSFLSLLC 188
           F S + + F N+ S N  +     ++  KSSNSE   + ++    ++ +  ++SFLS LC
Sbjct: 22  FHSHRPHRFSNRISGNGSWVRERRRLSVKSSNSEAKSNESSQ---KSSSNNTSSFLSFLC 78

Query: 187 PLLKVFAASDPSQERNTYLEVATSSLSSLARFPWGSRSIYGNSPDPEIAAEDPQVHLQLF 8
           PLLKVF+  DPSQ RN  LEVATSSL+S+AR PWGSR   G S D +  + +P + LQLF
Sbjct: 79  PLLKVFSGGDPSQRRNHALEVATSSLASVARLPWGSRVSTG-SIDNQDVSSNPPLRLQLF 137

Query: 7   EF 2
           EF
Sbjct: 138 EF 139


>ref|XP_002327378.1| predicted protein [Populus trichocarpa] gi|222835748|gb|EEE74183.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
 Frame = -2

Query: 328 FPNKKSKNHYYKIVAKSSNSEKNGHLTTAPVLETENQQST-SFLSLLCPLLKVFAASDPS 152
           F N+   +   +   KS +S+    ++ +    + +  ST SFLS LCPLLK+F+  DPS
Sbjct: 25  FSNRNWVSLRKRFHVKSPDSDTTESVSASSDGSSSSSSSTNSFLSFLCPLLKLFSGGDPS 84

Query: 151 QERNTYLEVATSSLSSLARFPWGSRSIYGNSPDPEIAAEDPQVHLQLFEF 2
           QERN  LEVATSSLS+LAR PWGSRS+  N  + E    DP   LQL+EF
Sbjct: 85  QERNYTLEVATSSLSTLARLPWGSRSLSENLNNQETTISDPPKPLQLYEF 134


>ref|NP_567349.1| thioredoxin family protein [Arabidopsis thaliana]
           gi|30681283|ref|NP_849353.1| thioredoxin family protein
           [Arabidopsis thaliana] gi|332657427|gb|AEE82827.1|
           thioredoxin family protein [Arabidopsis thaliana]
           gi|332657428|gb|AEE82828.1| thioredoxin family protein
           [Arabidopsis thaliana]
          Length = 333

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 54/98 (55%), Positives = 65/98 (66%)
 Frame = -2

Query: 295 KIVAKSSNSEKNGHLTTAPVLETENQQSTSFLSLLCPLLKVFAASDPSQERNTYLEVATS 116
           ++  KSSNSE  G    A    + N  S SFLS LCPLLKVF+  DPSQ+RN  LEVATS
Sbjct: 43  RLYVKSSNSE--GKKEEAAQKSSSNNTS-SFLSFLCPLLKVFSGGDPSQQRNHALEVATS 99

Query: 115 SLSSLARFPWGSRSIYGNSPDPEIAAEDPQVHLQLFEF 2
           SL+S+AR PWGSR   G S D +  + +P + LQLFEF
Sbjct: 100 SLASVARLPWGSRVSTG-SIDNQDVSSNPPLRLQLFEF 136


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