BLASTX nr result

ID: Coptis25_contig00026147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026147
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265027.2| PREDICTED: A/G-specific adenine DNA glycosyl...   186   5e-45
emb|CBI25679.3| unnamed protein product [Vitis vinifera]              186   5e-45
emb|CAN71629.1| hypothetical protein VITISV_015579 [Vitis vinifera]   173   3e-41
ref|XP_002321221.1| predicted protein [Populus trichocarpa] gi|2...   171   9e-41
ref|XP_003528811.1| PREDICTED: A/G-specific adenine DNA glycosyl...   170   2e-40

>ref|XP_002265027.2| PREDICTED: A/G-specific adenine DNA glycosylase [Vitis vinifera]
          Length = 464

 Score =  186 bits (471), Expect = 5e-45
 Identities = 96/161 (59%), Positives = 123/161 (76%), Gaps = 4/161 (2%)
 Frame = -2

Query: 681 RVPKTKQRLEFCAVCVVEILDDQRPDTPRGARRNNVFLLVKRPDEGLLAGLWEFPSVLMD 502
           +V K K+R +F AV VV+IL++Q  D  +G++ N+ FLLVKRP+EGLLAGLWEFPSVL+D
Sbjct: 283 KVVKAKKRHDFSAVSVVKILEEQ--DISKGSQYNSRFLLVKRPNEGLLAGLWEFPSVLLD 340

Query: 501 GEAVLTVRRQAIDQYLKKSFKLDTKKMCTILSRNHVGECMHIFSHIRLRMYVELLILRLK 322
           GEA    RR+ ID++LK SFKLDTKK C I+SR  VGEC+H+F+HI L MYVELL+L LK
Sbjct: 341 GEADGATRRKRIDRFLK-SFKLDTKKNCRIVSREDVGECVHVFTHIHLTMYVELLVLHLK 399

Query: 321 GGASFFYGKEE----AWKCVDSHSIQSIGLTSGVRKVYNMV 211
           GG    Y  E+     W+ +DS ++ S+GLTSGVRKVYNM+
Sbjct: 400 GGMKISYENEDKETMTWRWIDSEALSSMGLTSGVRKVYNMI 440


>emb|CBI25679.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  186 bits (471), Expect = 5e-45
 Identities = 96/161 (59%), Positives = 123/161 (76%), Gaps = 4/161 (2%)
 Frame = -2

Query: 681 RVPKTKQRLEFCAVCVVEILDDQRPDTPRGARRNNVFLLVKRPDEGLLAGLWEFPSVLMD 502
           +V K K+R +F AV VV+IL++Q  D  +G++ N+ FLLVKRP+EGLLAGLWEFPSVL+D
Sbjct: 325 KVVKAKKRHDFSAVSVVKILEEQ--DISKGSQYNSRFLLVKRPNEGLLAGLWEFPSVLLD 382

Query: 501 GEAVLTVRRQAIDQYLKKSFKLDTKKMCTILSRNHVGECMHIFSHIRLRMYVELLILRLK 322
           GEA    RR+ ID++LK SFKLDTKK C I+SR  VGEC+H+F+HI L MYVELL+L LK
Sbjct: 383 GEADGATRRKRIDRFLK-SFKLDTKKNCRIVSREDVGECVHVFTHIHLTMYVELLVLHLK 441

Query: 321 GGASFFYGKEE----AWKCVDSHSIQSIGLTSGVRKVYNMV 211
           GG    Y  E+     W+ +DS ++ S+GLTSGVRKVYNM+
Sbjct: 442 GGMKISYENEDKETMTWRWIDSEALSSMGLTSGVRKVYNMI 482


>emb|CAN71629.1| hypothetical protein VITISV_015579 [Vitis vinifera]
          Length = 1031

 Score =  173 bits (438), Expect = 3e-41
 Identities = 96/183 (52%), Positives = 123/183 (67%), Gaps = 26/183 (14%)
 Frame = -2

Query: 681  RVPKTKQRLEFCAVCVVEILDDQRPDTPRGARRNNVFLLVKRPDEGLLAGLWEFPSVLMD 502
            +V K K+R +F AV VV+IL++Q  D  +G++ N+ FLLVKRP+EGLLAGLWEFPSVL+D
Sbjct: 828  KVVKAKKRHDFSAVSVVKILEEQ--DISKGSQYNSRFLLVKRPNEGLLAGLWEFPSVLLD 885

Query: 501  GEAVLTVRRQAIDQYLKKSFKLDTKKMCTILSRNHVGECMHIFSHIRLRMYVELLILRLK 322
            GEA    RR+ ID++L KSFKLDTKK C I+SR  VGEC+H+F+HI L MYVELL+L LK
Sbjct: 886  GEADGATRRKRIDRFL-KSFKLDTKKNCRIVSREDVGECVHVFTHIHLTMYVELLVLHLK 944

Query: 321  ----------------------GGASFFYGKEE----AWKCVDSHSIQSIGLTSGVRKVY 220
                                  GG    Y  E+     W+ +DS ++ S+GLTSGVRKVY
Sbjct: 945  GLGLLINSHSQICMSVYVSLYPGGMKISYENEDKETMTWRWIDSEALSSMGLTSGVRKVY 1004

Query: 219  NMV 211
            NM+
Sbjct: 1005 NMI 1007


>ref|XP_002321221.1| predicted protein [Populus trichocarpa] gi|222861994|gb|EEE99536.1|
           predicted protein [Populus trichocarpa]
          Length = 480

 Score =  171 bits (434), Expect = 9e-41
 Identities = 88/154 (57%), Positives = 114/154 (74%), Gaps = 4/154 (2%)
 Frame = -2

Query: 672 KTKQRLEFCAVCVVEILDDQRPDTPRGARRNNVFLLVKRPDEGLLAGLWEFPSVLMDGEA 493
           K KQR EF AVC VEI    R D   G + ++VFLLVKRPDEGLLAGLWEFPSV++  EA
Sbjct: 290 KLKQRHEFSAVCAVEITG--RQDLIEGDQSSSVFLLVKRPDEGLLAGLWEFPSVMLGKEA 347

Query: 492 VLTVRRQAIDQYLKKSFKLDTKKMCTILSRNHVGECMHIFSHIRLRMYVELLILRLKGGA 313
            +T RR+ ++++LKKSF+LD +K C++L R  +GE +HIF+HIRL++YVELLI+ LKG  
Sbjct: 348 DMTRRRKEMNRFLKKSFRLDPQKTCSVLLREDIGEFIHIFTHIRLKVYVELLIVHLKGDM 407

Query: 312 SFFYGKEE----AWKCVDSHSIQSIGLTSGVRKV 223
           S  + K+      WKCVD  ++ S+GLTSGVRKV
Sbjct: 408 SDLFSKQSRENMTWKCVDREALSSLGLTSGVRKV 441


>ref|XP_003528811.1| PREDICTED: A/G-specific adenine DNA glycosylase-like [Glycine max]
          Length = 471

 Score =  170 bits (431), Expect = 2e-40
 Identities = 85/157 (54%), Positives = 117/157 (74%), Gaps = 3/157 (1%)
 Frame = -2

Query: 672 KTKQRLEFCAVCVVEILDDQRPDTPRGARRNNVFLLVKRPDEGLLAGLWEFPSVLMDGEA 493
           K KQR +F AVCVVE++     +T    + ++ F+LVKRP+EGLLAGLWEFPSVL+DGEA
Sbjct: 293 KVKQRCDFSAVCVVELVG---AETLNKNQSSSKFILVKRPEEGLLAGLWEFPSVLLDGEA 349

Query: 492 VLTVRRQAIDQYLKKSFKLDTKKMCTILSRNHVGECMHIFSHIRLRMYVELLILRLKGGA 313
           V   RR+A+D++L+K+ K+D +K C I+ R  +GE +HIFSHIRL++YVELL+L+LK G 
Sbjct: 350 VPLARREAMDRFLEKNLKIDIRKTCNIVLREDIGEFVHIFSHIRLKLYVELLVLQLKVGV 409

Query: 312 SFFY---GKEEAWKCVDSHSIQSIGLTSGVRKVYNMV 211
              +     +  WKCV S+++ S+GLT+ VRKVYNMV
Sbjct: 410 DDLFKSPDNKTTWKCVYSNALSSMGLTTSVRKVYNMV 446


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