BLASTX nr result

ID: Coptis25_contig00026141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026141
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFG71033.1| Pinus taeda anonymous locus 0_2551_02 genomic seq...    93   3e-17
ref|XP_003543854.1| PREDICTED: uncharacterized protein LOC100780...    87   1e-15
ref|NP_001170317.1| uncharacterized protein LOC100384284 [Zea ma...    85   5e-15
ref|XP_002458511.1| hypothetical protein SORBIDRAFT_03g034920 [S...    85   7e-15
ref|XP_002443644.1| hypothetical protein SORBIDRAFT_08g022750 [S...    84   9e-15

>gb|AFG71033.1| Pinus taeda anonymous locus 0_2551_02 genomic sequence
           gi|383175219|gb|AFG71034.1| Pinus taeda anonymous locus
           0_2551_02 genomic sequence gi|383175220|gb|AFG71035.1|
           Pinus taeda anonymous locus 0_2551_02 genomic sequence
           gi|383175221|gb|AFG71036.1| Pinus taeda anonymous locus
           0_2551_02 genomic sequence gi|383175222|gb|AFG71037.1|
           Pinus taeda anonymous locus 0_2551_02 genomic sequence
           gi|383175223|gb|AFG71038.1| Pinus taeda anonymous locus
           0_2551_02 genomic sequence gi|383175224|gb|AFG71039.1|
           Pinus taeda anonymous locus 0_2551_02 genomic sequence
           gi|383175225|gb|AFG71040.1| Pinus taeda anonymous locus
           0_2551_02 genomic sequence gi|383175226|gb|AFG71041.1|
           Pinus taeda anonymous locus 0_2551_02 genomic sequence
           gi|383175227|gb|AFG71042.1| Pinus taeda anonymous locus
           0_2551_02 genomic sequence gi|383175228|gb|AFG71043.1|
           Pinus taeda anonymous locus 0_2551_02 genomic sequence
           gi|383175229|gb|AFG71044.1| Pinus taeda anonymous locus
           0_2551_02 genomic sequence gi|383175230|gb|AFG71045.1|
           Pinus taeda anonymous locus 0_2551_02 genomic sequence
           gi|383175231|gb|AFG71046.1| Pinus taeda anonymous locus
           0_2551_02 genomic sequence gi|383175232|gb|AFG71047.1|
           Pinus taeda anonymous locus 0_2551_02 genomic sequence
           gi|383175233|gb|AFG71048.1| Pinus taeda anonymous locus
           0_2551_02 genomic sequence gi|383175235|gb|AFG71049.1|
           Pinus taeda anonymous locus 0_2551_02 genomic sequence
          Length = 104

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/65 (69%), Positives = 54/65 (83%)
 Frame = +2

Query: 2   WDMYGVTTHELHNLALKVLSQSVNTSCAERAWSTYSYIHSVKRNHMNADRAESLVFVHYN 181
           W+M+G  T  L +LAL+VLSQ VNTS AER WS+YS+IHSVKRN ++ DRAESLV+VHYN
Sbjct: 40  WNMHGGGTPLLQSLALRVLSQVVNTSSAERCWSSYSFIHSVKRNRLSLDRAESLVYVHYN 99

Query: 182 QRLLS 196
            RLLS
Sbjct: 100 LRLLS 104


>ref|XP_003543854.1| PREDICTED: uncharacterized protein LOC100780312 [Glycine max]
          Length = 557

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/85 (51%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
 Frame = +2

Query: 2   WDMYGVTTHELHNLALKVLSQSVNTSCAERAWSTYSYIHSVKRNHMNADRAESLVFVHYN 181
           W ++G+    L  +ALK+L+Q  ++SC ER WSTYS+IHS+KRN M   RAE LVFVH N
Sbjct: 442 WLVHGINAPILQKIALKLLAQPCSSSCCERNWSTYSFIHSLKRNKMTPHRAEDLVFVHSN 501

Query: 182 QRLLSRYRADY--ETYKNWDVYANE 250
            RLLSR    Y  E  K WDV  ++
Sbjct: 502 LRLLSRNTPQYHQEETKMWDVAGDD 526


>ref|NP_001170317.1| uncharacterized protein LOC100384284 [Zea mays]
           gi|224035021|gb|ACN36586.1| unknown [Zea mays]
          Length = 170

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 47/94 (50%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
 Frame = +2

Query: 2   WDMYGVTTHELHNLALKVLSQSVNTSCAERAWSTYSYIHSVKRNHMNADRAESLVFVHYN 181
           W ++G +  EL  LALK+L Q  ++SCAER WSTY  IHS  RN +N  RAE LVF H N
Sbjct: 50  WGIHGHSAPELKKLALKLLGQPASSSCAERNWSTYGLIHSSLRNRLNPGRAEDLVFTHQN 109

Query: 182 QRLLSRYRADYE--TYKNWDVYANEVHLENDIEG 277
            RLLSR   +Y       WDV A+    E D EG
Sbjct: 110 SRLLSRKSDEYRCGPLAMWDVGADT--FEADFEG 141


>ref|XP_002458511.1| hypothetical protein SORBIDRAFT_03g034920 [Sorghum bicolor]
           gi|241930486|gb|EES03631.1| hypothetical protein
           SORBIDRAFT_03g034920 [Sorghum bicolor]
          Length = 687

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
 Frame = +2

Query: 2   WDMYGVTTHELHNLALKVLSQSVNTSCAERAWSTYSYIHSVKRNHMNADRAESLVFVHYN 181
           W  +G +  +L +LA+K+LSQ  ++SC ER WSTYS++HSVKRN +  +RAE LVFVH N
Sbjct: 556 WTNHGQSAPQLMSLAMKLLSQPASSSCCERNWSTYSFVHSVKRNALTPERAEDLVFVHSN 615

Query: 182 QRLLSRYRADYET--YKNWDV 238
            R LSR    Y+T   + WDV
Sbjct: 616 LRHLSRRTDAYKTGETRMWDV 636


>ref|XP_002443644.1| hypothetical protein SORBIDRAFT_08g022750 [Sorghum bicolor]
           gi|241944337|gb|EES17482.1| hypothetical protein
           SORBIDRAFT_08g022750 [Sorghum bicolor]
          Length = 684

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
 Frame = +2

Query: 2   WDMYGVTTHELHNLALKVLSQSVNTSCAERAWSTYSYIHSVKRNHMNADRAESLVFVHYN 181
           W  +G +  +L +LA+K+LSQ  ++SC ER WSTYS++HSVKRN +  +RAE LVFVH N
Sbjct: 553 WTNHGQSAPQLMSLAMKLLSQPASSSCCERNWSTYSFVHSVKRNVLTPERAEDLVFVHSN 612

Query: 182 QRLLSRYRADYET--YKNWDV 238
            R LSR    Y+T   + WDV
Sbjct: 613 LRHLSRRTDAYKTGETRMWDV 633


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