BLASTX nr result

ID: Coptis25_contig00026134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026134
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277281.2| PREDICTED: reticuline oxidase-like protein-l...   222   3e-56
emb|CAN63058.1| hypothetical protein VITISV_004191 [Vitis vinifera]   222   3e-56
ref|XP_002277310.1| PREDICTED: reticuline oxidase-like protein-l...   221   7e-56
ref|XP_002277294.1| PREDICTED: reticuline oxidase-like protein-l...   218   6e-55
dbj|BAJ40864.1| tetrahydroberberine oxidase [Coptis japonica]         214   6e-54

>ref|XP_002277281.2| PREDICTED: reticuline oxidase-like protein-like [Vitis vinifera]
          Length = 531

 Score =  222 bits (566), Expect = 3e-56
 Identities = 104/169 (61%), Positives = 132/169 (78%), Gaps = 4/169 (2%)
 Frame = +2

Query: 80  YDNFLQCTSLQSNSSIPI----YTPNTASYSSVLQFSIRNLRFTSPNTPKPELIVTPLHE 247
           ++NFLQC SL SN + PI    YTP   SYS++L+ +I NLRF+S  TPKP LI+TPLH 
Sbjct: 25  HENFLQCLSLNSNHTTPISNVLYTPKNLSYSAILESTIENLRFSSSATPKPLLILTPLHV 84

Query: 248 SHVQAAVICSRKYGMHIRVRSGGHDYEGLSYATGVPFVIVDLINLQSISVDAKDGTAWVS 427
           SH+QAAVICS+KYGM+IRVRSGGHDYEGLSY + +PF+I+DL+ L+SI++  +DGTAWV 
Sbjct: 85  SHIQAAVICSKKYGMNIRVRSGGHDYEGLSYVSEIPFIIIDLVELRSINISIEDGTAWVE 144

Query: 428 SGATIGQLYYRIAEQSRTYGFPAGICPTVXXXXXXXXXXXXALLRKYGL 574
           +GAT+G++YYRIA++SRTYGFPAG CPTV             L+RKYGL
Sbjct: 145 AGATVGEVYYRIAQKSRTYGFPAGSCPTVGVGGHFSGGGYGTLMRKYGL 193


>emb|CAN63058.1| hypothetical protein VITISV_004191 [Vitis vinifera]
          Length = 545

 Score =  222 bits (566), Expect = 3e-56
 Identities = 109/195 (55%), Positives = 140/195 (71%), Gaps = 4/195 (2%)
 Frame = +2

Query: 2   GNSSFALVALFYTXXXXXXXXXXXXXYDNFLQCTSLQSNSSIPI----YTPNTASYSSVL 169
           G SS A+   F +             ++NFLQC SL SN + PI    YTP   SYS++L
Sbjct: 13  GASSSAIFLPFVSLVVLVSWATSSSIHENFLQCLSLNSNHTTPISNVLYTPKNLSYSAIL 72

Query: 170 QFSIRNLRFTSPNTPKPELIVTPLHESHVQAAVICSRKYGMHIRVRSGGHDYEGLSYATG 349
           + +I NLRF+S  TPKP LI+TPLH SH+QAAVICS+K+GM+IRVRSGGHDYEGLSY + 
Sbjct: 73  ESTIENLRFSSSATPKPLLILTPLHVSHIQAAVICSKKFGMNIRVRSGGHDYEGLSYVSE 132

Query: 350 VPFVIVDLINLQSISVDAKDGTAWVSSGATIGQLYYRIAEQSRTYGFPAGICPTVXXXXX 529
           +PF+I+DL+ L+SI++  +DGTAWV +GAT+G++YYRIA++SRTYGFPAG CPTV     
Sbjct: 133 IPFIIIDLVELRSINISIEDGTAWVEAGATVGEVYYRIAQKSRTYGFPAGSCPTVGVGGH 192

Query: 530 XXXXXXXALLRKYGL 574
                   L+RKYGL
Sbjct: 193 FSGGGXGTLMRKYGL 207


>ref|XP_002277310.1| PREDICTED: reticuline oxidase-like protein-like [Vitis vinifera]
          Length = 537

 Score =  221 bits (563), Expect = 7e-56
 Identities = 106/169 (62%), Positives = 130/169 (76%), Gaps = 4/169 (2%)
 Frame = +2

Query: 80  YDNFLQCTSLQSNSSIPI----YTPNTASYSSVLQFSIRNLRFTSPNTPKPELIVTPLHE 247
           + NFLQC +L SNSS PI    YTP  +SY +VL FSI+NLRFTS  TPKP++IVTPLH 
Sbjct: 30  HQNFLQCLTLNSNSSTPITKVLYTPKNSSYETVLDFSIQNLRFTSSCTPKPQIIVTPLHV 89

Query: 248 SHVQAAVICSRKYGMHIRVRSGGHDYEGLSYATGVPFVIVDLINLQSISVDAKDGTAWVS 427
           SH+QAAVICS+KYG+ IR RSGGHDYEGLSY + VPF+IVDL+ L+SI+VD +DG+AWV 
Sbjct: 90  SHIQAAVICSKKYGLQIRARSGGHDYEGLSYVSEVPFIIVDLLELRSINVDVEDGSAWVE 149

Query: 428 SGATIGQLYYRIAEQSRTYGFPAGICPTVXXXXXXXXXXXXALLRKYGL 574
           +GAT+G++YY IA ++  +GFPAGICPTV             LLRKYGL
Sbjct: 150 AGATLGEVYYSIANKTAIHGFPAGICPTVGVGGHLSGGGYGTLLRKYGL 198


>ref|XP_002277294.1| PREDICTED: reticuline oxidase-like protein-like [Vitis vinifera]
          Length = 536

 Score =  218 bits (555), Expect = 6e-55
 Identities = 105/169 (62%), Positives = 131/169 (77%), Gaps = 4/169 (2%)
 Frame = +2

Query: 80  YDNFLQCTSLQSNSSIPI----YTPNTASYSSVLQFSIRNLRFTSPNTPKPELIVTPLHE 247
           + NFLQC +L SNSS PI    YTP+ +SY +VL FSI+NLRFTS  TP+P++IVTPL  
Sbjct: 30  HQNFLQCLTLNSNSSTPITKVVYTPHNSSYETVLDFSIQNLRFTSSCTPRPQVIVTPLLV 89

Query: 248 SHVQAAVICSRKYGMHIRVRSGGHDYEGLSYATGVPFVIVDLINLQSISVDAKDGTAWVS 427
           SH+QAAVICS+KYG+ IR RSGGHDYEGLSY + VPF+IVDL+ L+SI+VD +DG+AWV 
Sbjct: 90  SHIQAAVICSKKYGLQIRARSGGHDYEGLSYVSEVPFIIVDLLELRSINVDVEDGSAWVE 149

Query: 428 SGATIGQLYYRIAEQSRTYGFPAGICPTVXXXXXXXXXXXXALLRKYGL 574
           +GAT+G++YY IA ++ T+GFPAGICPTV             LLRKYGL
Sbjct: 150 AGATLGEVYYSIANKTATHGFPAGICPTVGVGGHLSGGGYGTLLRKYGL 198


>dbj|BAJ40864.1| tetrahydroberberine oxidase [Coptis japonica]
          Length = 540

 Score =  214 bits (546), Expect = 6e-54
 Identities = 100/165 (60%), Positives = 128/165 (77%)
 Frame = +2

Query: 80  YDNFLQCTSLQSNSSIPIYTPNTASYSSVLQFSIRNLRFTSPNTPKPELIVTPLHESHVQ 259
           Y+ FLQC  L+SNSSIPIY P++ SY+S+L  SI NLRF SP TPKP  I+TP+ ESHVQ
Sbjct: 32  YEGFLQCLDLRSNSSIPIYNPSSTSYTSILHASIYNLRFISPTTPKPNFIITPMRESHVQ 91

Query: 260 AAVICSRKYGMHIRVRSGGHDYEGLSYATGVPFVIVDLINLQSISVDAKDGTAWVSSGAT 439
           A V+CSR++G+ IR RSGGHD+EG S+   VPFV++DLI+L++ISV+ +D TAWV +GAT
Sbjct: 92  ATVVCSREHGLLIRTRSGGHDFEGSSFVATVPFVLLDLIHLRTISVNIEDETAWVQTGAT 151

Query: 440 IGQLYYRIAEQSRTYGFPAGICPTVXXXXXXXXXXXXALLRKYGL 574
           IG+LYYRIAE+SRT+ FPAG+CP+V             L+RKYGL
Sbjct: 152 IGELYYRIAEKSRTHAFPAGLCPSVGVGGHISGAGYGILMRKYGL 196


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