BLASTX nr result

ID: Coptis25_contig00026122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026122
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argo...   169   2e-40
emb|CBI17106.3| unnamed protein product [Vitis vinifera]              169   2e-40
ref|XP_003563234.1| PREDICTED: protein argonaute 1D-like [Brachy...   166   1e-39
ref|XP_002298162.1| argonaute protein group [Populus trichocarpa...   164   7e-39
ref|XP_002978905.1| hypothetical protein SELMODRAFT_110151 [Sela...   163   2e-38

>ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 5-like [Vitis
            vinifera]
          Length = 1038

 Score =  169 bits (428), Expect = 2e-40
 Identities = 78/105 (74%), Positives = 91/105 (86%)
 Frame = +2

Query: 20   ALSRRMPIVSEKPTIIFGADVTHPSPGEDSSPSIAAVVASMDWPEISKYRGLVSAQHPHQ 199
            A+ R++P+VS+ PTIIFGADVTHP PGEDSSPSIAAVVASMDWPE++KYRGLVSAQH  +
Sbjct: 743  AIQRKIPLVSDLPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPEVTKYRGLVSAQHHRE 802

Query: 200  ELIQDLYSLVEDPQKGTSHAGMIRELLISFRKSNGFKPHRIIFYR 334
            E+IQDLY    DP KG +H GMIRELLI+FR+S G+KP RIIFYR
Sbjct: 803  EIIQDLYKTTADPHKGVTHGGMIRELLIAFRRSTGYKPSRIIFYR 847


>emb|CBI17106.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score =  169 bits (428), Expect = 2e-40
 Identities = 78/105 (74%), Positives = 91/105 (86%)
 Frame = +2

Query: 20   ALSRRMPIVSEKPTIIFGADVTHPSPGEDSSPSIAAVVASMDWPEISKYRGLVSAQHPHQ 199
            A+ R++P+VS+ PTIIFGADVTHP PGEDSSPSIAAVVASMDWPE++KYRGLVSAQH  +
Sbjct: 737  AIQRKIPLVSDLPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPEVTKYRGLVSAQHHRE 796

Query: 200  ELIQDLYSLVEDPQKGTSHAGMIRELLISFRKSNGFKPHRIIFYR 334
            E+IQDLY    DP KG +H GMIRELLI+FR+S G+KP RIIFYR
Sbjct: 797  EIIQDLYKTTADPHKGVTHGGMIRELLIAFRRSTGYKPSRIIFYR 841


>ref|XP_003563234.1| PREDICTED: protein argonaute 1D-like [Brachypodium distachyon]
          Length = 1044

 Score =  166 bits (421), Expect = 1e-39
 Identities = 79/105 (75%), Positives = 91/105 (86%)
 Frame = +2

Query: 20   ALSRRMPIVSEKPTIIFGADVTHPSPGEDSSPSIAAVVASMDWPEISKYRGLVSAQHPHQ 199
            ALSRR+P+V+++PTIIFGADVTHP PGEDSSPSIAAVVAS DWPE++KY GLVSAQ   Q
Sbjct: 738  ALSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQSHRQ 797

Query: 200  ELIQDLYSLVEDPQKGTSHAGMIRELLISFRKSNGFKPHRIIFYR 334
            ELI+DLY +  DPQ+GT H GMIRELLISF++S G KP RIIFYR
Sbjct: 798  ELIEDLYKVTHDPQRGTIHGGMIRELLISFKRSTGEKPQRIIFYR 842


>ref|XP_002298162.1| argonaute protein group [Populus trichocarpa]
           gi|222845420|gb|EEE82967.1| argonaute protein group
           [Populus trichocarpa]
          Length = 904

 Score =  164 bits (415), Expect = 7e-39
 Identities = 78/105 (74%), Positives = 90/105 (85%)
 Frame = +2

Query: 20  ALSRRMPIVSEKPTIIFGADVTHPSPGEDSSPSIAAVVASMDWPEISKYRGLVSAQHPHQ 199
           A+ RR+P V++ PTIIFGADVTHP PGEDSSPSIAAVVASMDWPE++KYRGLVSAQ   +
Sbjct: 613 AIQRRIPNVTDLPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPEVTKYRGLVSAQAHRE 672

Query: 200 ELIQDLYSLVEDPQKGTSHAGMIRELLISFRKSNGFKPHRIIFYR 334
           E+IQDLY   +DPQKG  H+GMIREL I+FR+S G KPHRIIFYR
Sbjct: 673 EIIQDLYKKYQDPQKGLVHSGMIRELFIAFRRSTGQKPHRIIFYR 717


>ref|XP_002978905.1| hypothetical protein SELMODRAFT_110151 [Selaginella moellendorffii]
           gi|300153223|gb|EFJ19862.1| hypothetical protein
           SELMODRAFT_110151 [Selaginella moellendorffii]
          Length = 955

 Score =  163 bits (412), Expect = 2e-38
 Identities = 80/105 (76%), Positives = 89/105 (84%)
 Frame = +2

Query: 20  ALSRRMPIVSEKPTIIFGADVTHPSPGEDSSPSIAAVVASMDWPEISKYRGLVSAQHPHQ 199
           ALSRR+P+VS+ PTIIFGADVTHP PGEDSSPSIAAVVAS DWPE++KY GLV AQ   Q
Sbjct: 657 ALSRRLPLVSDTPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQ 716

Query: 200 ELIQDLYSLVEDPQKGTSHAGMIRELLISFRKSNGFKPHRIIFYR 334
           ELIQDLY    DPQKGT + GMIRELLISFR ++G+KP RIIFYR
Sbjct: 717 ELIQDLYKTWVDPQKGTMNGGMIRELLISFRSASGYKPGRIIFYR 761


Top