BLASTX nr result

ID: Coptis25_contig00026117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026117
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302473.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_002326895.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_004152712.1| PREDICTED: uncharacterized protein LOC101220...    92   6e-17
ref|XP_004147794.1| PREDICTED: uncharacterized protein LOC101206...    91   1e-16
ref|XP_002510343.1| conserved hypothetical protein [Ricinus comm...    88   6e-16

>ref|XP_002302473.1| predicted protein [Populus trichocarpa] gi|222844199|gb|EEE81746.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/66 (74%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
 Frame = +1

Query: 1   INRSLSCHSQSKSSIST-RNAMKVDLRKLETTVLRRYWRHFKLVDDIPNPSKE*LIDIVQ 177
           ++RSLSC SQSK SIST R   KVDL KLE   L RYWRHF LVD IPNPSKE LID+VQ
Sbjct: 136 MSRSLSCDSQSKGSISTPRGTAKVDLSKLEVAALWRYWRHFNLVDSIPNPSKEQLIDVVQ 195

Query: 178 RHFMSQ 195
           RHFMSQ
Sbjct: 196 RHFMSQ 201


>ref|XP_002326895.1| predicted protein [Populus trichocarpa] gi|222835210|gb|EEE73645.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/66 (72%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
 Frame = +1

Query: 1   INRSLSCHSQSKSSIST-RNAMKVDLRKLETTVLRRYWRHFKLVDDIPNPSKE*LIDIVQ 177
           ++RSLSC SQSK S+ST R   KVDL KLE   L RYWRHF LVD IPNPSKE LID+VQ
Sbjct: 140 MSRSLSCDSQSKGSVSTPRGTTKVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLIDVVQ 199

Query: 178 RHFMSQ 195
           RHFMSQ
Sbjct: 200 RHFMSQ 205


>ref|XP_004152712.1| PREDICTED: uncharacterized protein LOC101220556 [Cucumis sativus]
           gi|449496053|ref|XP_004160024.1| PREDICTED:
           uncharacterized LOC101220556 [Cucumis sativus]
          Length = 223

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/66 (69%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
 Frame = +1

Query: 1   INRSLSCHSQSKSSIST-RNAMKVDLRKLETTVLRRYWRHFKLVDDIPNPSKE*LIDIVQ 177
           ++RSLSC SQSKSS+S  + + KVDL KLE   L RYWRHF LVD IPNPSKE L+D+VQ
Sbjct: 135 MSRSLSCDSQSKSSVSAPQGSTKVDLSKLEMAALWRYWRHFNLVDAIPNPSKEQLVDLVQ 194

Query: 178 RHFMSQ 195
           RHFMSQ
Sbjct: 195 RHFMSQ 200


>ref|XP_004147794.1| PREDICTED: uncharacterized protein LOC101206163 [Cucumis sativus]
          Length = 224

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/66 (71%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
 Frame = +1

Query: 1   INRSLSCHSQSKSSIST-RNAMKVDLRKLETTVLRRYWRHFKLVDDIPNPSKE*LIDIVQ 177
           I+RS S  SQSK SIST R +MKVDL KLE + L RYWRHF LVD  PNPSKE L+D+VQ
Sbjct: 135 ISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDAFPNPSKEQLVDVVQ 194

Query: 178 RHFMSQ 195
           RHFMSQ
Sbjct: 195 RHFMSQ 200


>ref|XP_002510343.1| conserved hypothetical protein [Ricinus communis]
           gi|223551044|gb|EEF52530.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 225

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 2/67 (2%)
 Frame = +1

Query: 1   INRSLSCHSQSKSSIST-RNAMKVDLRKLETTVLRRYWRHFKLVDDIP-NPSKE*LIDIV 174
           ++RSLSC SQSKSS+ST R A KVDL KLE   L RYW++F LVD IP NPSKE L+D++
Sbjct: 136 MSRSLSCDSQSKSSVSTPRGATKVDLSKLEMAALWRYWKYFNLVDAIPTNPSKEQLVDVI 195

Query: 175 QRHFMSQ 195
           QRHFMSQ
Sbjct: 196 QRHFMSQ 202


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