BLASTX nr result

ID: Coptis25_contig00026090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026090
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595331.1| Beta-galactosidase [Medicago truncatula] gi|...   195   6e-48
ref|XP_003541315.1| PREDICTED: beta-galactosidase-like [Glycine ...   185   6e-45
ref|XP_002516256.1| beta-galactosidase, putative [Ricinus commun...   184   1e-44
ref|XP_003550597.1| PREDICTED: beta-galactosidase 7-like [Glycin...   184   1e-44
emb|CAJ09953.1| beta-galactosidase [Mangifera indica]                 181   1e-43

>ref|XP_003595331.1| Beta-galactosidase [Medicago truncatula] gi|355484379|gb|AES65582.1|
            Beta-galactosidase [Medicago truncatula]
          Length = 830

 Score =  195 bits (495), Expect = 6e-48
 Identities = 94/146 (64%), Positives = 116/146 (79%), Gaps = 1/146 (0%)
 Frame = +3

Query: 3    DSKCASNCGGPSQRWYHVPRSFFRDGKNSLILFEEMGGNPSQVNFQTIAVGSAGGRVYEG 182
            D+KC SNCG PSQRWYHVPR F  DG N+L+LFEE+GGNPSQ+NFQT+ VGSA    YE 
Sbjct: 687  DTKCVSNCGKPSQRWYHVPRDFIEDGVNTLVLFEEIGGNPSQINFQTVIVGSACANAYEN 746

Query: 183  KTLELSCQKKGQTISTVNFASFGDPQGTCGSFVKGSCESTN-SMSAVEQACVGQESCSIE 359
            KTLELSC   G++IS + FASFG+PQGTCG+F KGSCES N ++S V++ACVG+ESCSI+
Sbjct: 747  KTLELSCH--GRSISDIKFASFGNPQGTCGAFTKGSCESNNEALSLVQKACVGKESCSID 804

Query: 360  ASEEILGTLSHCGSDLTKSLAVEIVC 437
             SE+  G  ++CG ++ K LAVE VC
Sbjct: 805  VSEKTFGA-TNCG-NMVKRLAVEAVC 828


>ref|XP_003541315.1| PREDICTED: beta-galactosidase-like [Glycine max]
          Length = 826

 Score =  185 bits (469), Expect = 6e-45
 Identities = 87/146 (59%), Positives = 113/146 (77%), Gaps = 1/146 (0%)
 Frame = +3

Query: 3    DSKCASNCGGPSQRWYHVPRSFFRDGKNSLILFEEMGGNPSQVNFQTIAVGSAGGRVYEG 182
            DSKC +NCG P+QRWYHVPRS+ +DG N+L+LF E+GGNPSQVNFQT+ VG+     YE 
Sbjct: 685  DSKCVTNCGKPTQRWYHVPRSYLKDGANNLVLFAELGGNPSQVNFQTVVVGTVCANAYEN 744

Query: 183  KTLELSCQKKGQTISTVNFASFGDPQGTCGSFVKGSCES-TNSMSAVEQACVGQESCSIE 359
            KTLELSCQ  G+ IS + FASFGDP+G CG+F  GSCES +N++S V++ACVG+++CS +
Sbjct: 745  KTLELSCQ--GRKISAIKFASFGDPEGVCGAFTNGSCESKSNALSIVQKACVGKQACSFD 802

Query: 360  ASEEILGTLSHCGSDLTKSLAVEIVC 437
             SE+  G  + CG ++ K LAVE VC
Sbjct: 803  VSEKTFGPTA-CG-NVAKRLAVEAVC 826


>ref|XP_002516256.1| beta-galactosidase, putative [Ricinus communis]
            gi|223544742|gb|EEF46258.1| beta-galactosidase, putative
            [Ricinus communis]
          Length = 848

 Score =  184 bits (467), Expect = 1e-44
 Identities = 84/146 (57%), Positives = 114/146 (78%), Gaps = 1/146 (0%)
 Frame = +3

Query: 3    DSKCASNCGGPSQRWYHVPRSFFRDGKNSLILFEEMGGNPSQVNFQTIAVGSAGGRVYEG 182
            ++KC +NCG P+QRWYHVPRSFF D +N+L+LFEE GGNP+ VNFQT+ VG   G   EG
Sbjct: 706  NNKCVTNCGKPTQRWYHVPRSFFNDYENTLVLFEEFGGNPAGVNFQTVTVGKVSGSAGEG 765

Query: 183  KTLELSCQKKGQTISTVNFASFGDPQGTCGSFVKGSCESTN-SMSAVEQACVGQESCSIE 359
            +T+ELSC   G++IS + FASFGDPQGT G++VKG+CE +N + S V++ACVG+E+C +E
Sbjct: 766  ETIELSC--NGKSISAIEFASFGDPQGTSGAYVKGTCEGSNDAFSIVQKACVGKETCKLE 823

Query: 360  ASEEILGTLSHCGSDLTKSLAVEIVC 437
            AS+++ G  S CGSD+  +LAV+  C
Sbjct: 824  ASKDVFGPTS-CGSDVVNTLAVQATC 848


>ref|XP_003550597.1| PREDICTED: beta-galactosidase 7-like [Glycine max]
          Length = 831

 Score =  184 bits (466), Expect = 1e-44
 Identities = 88/146 (60%), Positives = 112/146 (76%), Gaps = 1/146 (0%)
 Frame = +3

Query: 3    DSKCASNCGGPSQRWYHVPRSFFRDGKNSLILFEEMGGNPSQVNFQTIAVGSAGGRVYEG 182
            DSKC +NCG P+QRWYHVPRS+ +DG N+L+LF E+GGNPS VNFQT+ VG+     YE 
Sbjct: 690  DSKCVTNCGKPTQRWYHVPRSYLKDGANTLVLFAELGGNPSLVNFQTVVVGNVCANAYEN 749

Query: 183  KTLELSCQKKGQTISTVNFASFGDPQGTCGSFVKGSCES-TNSMSAVEQACVGQESCSIE 359
            KTLELSCQ  G+ IS + FASFGDP+G CG+F  GSCES +N++  V++ACVG+E+CSI+
Sbjct: 750  KTLELSCQ--GRKISAIKFASFGDPKGVCGAFTNGSCESKSNALPIVQKACVGKEACSID 807

Query: 360  ASEEILGTLSHCGSDLTKSLAVEIVC 437
             SE+  G  + CG +L K LAVE VC
Sbjct: 808  LSEKTFGATA-CG-NLAKRLAVEAVC 831


>emb|CAJ09953.1| beta-galactosidase [Mangifera indica]
          Length = 827

 Score =  181 bits (458), Expect = 1e-43
 Identities = 88/146 (60%), Positives = 112/146 (76%), Gaps = 1/146 (0%)
 Frame = +3

Query: 3    DSKCASNCGGPSQRWYHVPRSFFRDGKNSLILFEEMGGNPSQVNFQTIAVGSAGGRVYEG 182
            ++KC +NCG PSQRWYHVPRSF +DG+N+L+LFEE GGNP QVNFQT+ VGS  G  +E 
Sbjct: 686  NNKCVTNCGQPSQRWYHVPRSFLQDGENTLVLFEEFGGNPWQVNFQTLVVGSVCGNAHEK 745

Query: 183  KTLELSCQKKGQTISTVNFASFGDPQGTCGSFVKGSCESTNS-MSAVEQACVGQESCSIE 359
            KTLELSC   G+ IS + FASFGDPQGTCGSF  G+C++    +  ++Q CVG+E+CSI+
Sbjct: 746  KTLELSC--NGRPISAIKFASFGDPQGTCGSFQAGTCQTEQDILPVLQQECVGKETCSID 803

Query: 360  ASEEILGTLSHCGSDLTKSLAVEIVC 437
             SE+ LG  ++CGS + K LAVE VC
Sbjct: 804  ISEDKLGK-TNCGS-VVKKLAVEAVC 827


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