BLASTX nr result
ID: Coptis25_contig00026086
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00026086 (329 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002872815.1| pentatricopeptide repeat-containing protein ... 82 3e-27 gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japo... 92 3e-27 ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group] g... 92 3e-27 gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays] 89 7e-27 ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-26 >ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 776 Score = 82.4 bits (202), Expect(2) = 3e-27 Identities = 34/68 (50%), Positives = 52/68 (76%) Frame = +3 Query: 3 NMITWSALISGYGCHGFGSKALDLFEQMKREGFIPDEAAFLSVLSACSHSGLVSEGKEFF 182 ++++W+ +I+GY HGFG +AL FE MKREG PD+A ++VLSACSH+GLV +G+++F Sbjct: 469 DIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYF 528 Query: 183 NLMHKHTG 206 + M + G Sbjct: 529 HTMTQDYG 536 Score = 64.3 bits (155), Expect(2) = 3e-27 Identities = 26/44 (59%), Positives = 35/44 (79%) Frame = +2 Query: 194 QTYGMSPGLKHYACVIDLLGRAGLIGEAWDMIEGMPFEPDTNIW 325 Q YG+ P +HYAC++DLLGRAGL+ EA ++++ MPFEPD IW Sbjct: 533 QDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIW 576 >gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group] Length = 734 Score = 91.7 bits (226), Expect(2) = 3e-27 Identities = 40/68 (58%), Positives = 53/68 (77%) Frame = +3 Query: 3 NMITWSALISGYGCHGFGSKALDLFEQMKREGFIPDEAAFLSVLSACSHSGLVSEGKEFF 182 ++ITW+A+I GYG HGFG A++LFE+MK G +P+E FLSVLSACSH+GLV EG+E+F Sbjct: 428 HVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYF 487 Query: 183 NLMHKHTG 206 M + G Sbjct: 488 TSMKEDYG 495 Score = 55.1 bits (131), Expect(2) = 3e-27 Identities = 20/44 (45%), Positives = 32/44 (72%) Frame = +2 Query: 194 QTYGMSPGLKHYACVIDLLGRAGLIGEAWDMIEGMPFEPDTNIW 325 + YG+ PG++HY ++DLLGRAG + EAW I+ MP +P +++ Sbjct: 492 EDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVY 535 >ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group] gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa Japonica Group] gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group] gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group] Length = 734 Score = 91.7 bits (226), Expect(2) = 3e-27 Identities = 40/68 (58%), Positives = 53/68 (77%) Frame = +3 Query: 3 NMITWSALISGYGCHGFGSKALDLFEQMKREGFIPDEAAFLSVLSACSHSGLVSEGKEFF 182 ++ITW+A+I GYG HGFG A++LFE+MK G +P+E FLSVLSACSH+GLV EG+E+F Sbjct: 428 HVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYF 487 Query: 183 NLMHKHTG 206 M + G Sbjct: 488 TSMKEDYG 495 Score = 55.1 bits (131), Expect(2) = 3e-27 Identities = 20/44 (45%), Positives = 32/44 (72%) Frame = +2 Query: 194 QTYGMSPGLKHYACVIDLLGRAGLIGEAWDMIEGMPFEPDTNIW 325 + YG+ PG++HY ++DLLGRAG + EAW I+ MP +P +++ Sbjct: 492 EDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVY 535 >gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays] Length = 693 Score = 88.6 bits (218), Expect(2) = 7e-27 Identities = 39/68 (57%), Positives = 53/68 (77%) Frame = +3 Query: 3 NMITWSALISGYGCHGFGSKALDLFEQMKREGFIPDEAAFLSVLSACSHSGLVSEGKEFF 182 ++ITW+A+I GYG HGFG A++LFE+MK G +P+E FLSVL+ACSH+GLV EG+++F Sbjct: 387 HVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYF 446 Query: 183 NLMHKHTG 206 M K G Sbjct: 447 ASMKKDYG 454 Score = 57.0 bits (136), Expect(2) = 7e-27 Identities = 21/42 (50%), Positives = 31/42 (73%) Frame = +2 Query: 200 YGMSPGLKHYACVIDLLGRAGLIGEAWDMIEGMPFEPDTNIW 325 YG+ PG++HY ++DLLGRAG + EAW I+ MP EP +++ Sbjct: 453 YGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVY 494 >ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like [Brachypodium distachyon] Length = 900 Score = 88.2 bits (217), Expect(2) = 1e-26 Identities = 39/68 (57%), Positives = 53/68 (77%) Frame = +3 Query: 3 NMITWSALISGYGCHGFGSKALDLFEQMKREGFIPDEAAFLSVLSACSHSGLVSEGKEFF 182 ++ITW+A+I GYG HG G A++LFE+MK G +P+E FLSVLSACSH+GLV EG+E+F Sbjct: 594 HVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYF 653 Query: 183 NLMHKHTG 206 + M + G Sbjct: 654 SSMKEDYG 661 Score = 56.6 bits (135), Expect(2) = 1e-26 Identities = 21/44 (47%), Positives = 32/44 (72%) Frame = +2 Query: 194 QTYGMSPGLKHYACVIDLLGRAGLIGEAWDMIEGMPFEPDTNIW 325 + YG+ PG++HY ++DLLGRAG + EAW I+ MP EP +++ Sbjct: 658 EDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVY 701