BLASTX nr result

ID: Coptis25_contig00026083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026083
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29251.3| unnamed protein product [Vitis vinifera]               80   1e-13
ref|XP_002511098.1| gcn4-complementing protein, putative [Ricinu...    78   8e-13
ref|XP_004167355.1| PREDICTED: ADP-ribosylation factor GTPase-ac...    77   1e-12
ref|XP_004152319.1| PREDICTED: ADP-ribosylation factor GTPase-ac...    77   1e-12
gb|AEL98882.1| ADP-ribosylation factor GTPase-activating protein...    74   1e-11

>emb|CBI29251.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 45/95 (47%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
 Frame = +3

Query: 3   KFIHAKYAEKLFVRKPKGQHHSFSVSQQMQNSVRSNDKKAVYRHIVCSGANVNAVNKRM- 179
           K+IHAKYAEKLFVRKPK   +   V+QQ+ ++VR+NDKKAVYR+IV S A+VN V ++  
Sbjct: 626 KYIHAKYAEKLFVRKPKDNQYPCLVTQQIWDAVRTNDKKAVYRYIVNSEADVNVVYEQTL 685

Query: 180 --XXXXXXXXXXXXNEPSLDRNSSCLEEDSSEKTS 278
                          + +LD +S CL  DS +K+S
Sbjct: 686 CNSSLTLAKVMLLQEQTNLDHSSRCLTGDSFDKSS 720


>ref|XP_002511098.1| gcn4-complementing protein, putative [Ricinus communis]
           gi|223550213|gb|EEF51700.1| gcn4-complementing protein,
           putative [Ricinus communis]
          Length = 818

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
 Frame = +3

Query: 3   KFIHAKYAEKLFVRKPKGQHHSFSVSQQMQNSVRSNDKKAVYRHIVCSGANVNAVNKR-- 176
           +FIHAKYAEK+F+ K K   H   V++Q+  SV +NDKKAVYRHIVCSGA+VNA++ +  
Sbjct: 627 QFIHAKYAEKIFIHKIKDDQHLLPVAEQVWESVYANDKKAVYRHIVCSGADVNAIHGQAS 686

Query: 177 -MXXXXXXXXXXXXNEPSLDRNSSCLE 254
                          + +LD N  CL+
Sbjct: 687 FSTSSSLTSVIQYKQQENLDLNFDCLQ 713


>ref|XP_004167355.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
           AGD3-like, partial [Cucumis sativus]
          Length = 1194

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/59 (66%), Positives = 47/59 (79%)
 Frame = +3

Query: 3   KFIHAKYAEKLFVRKPKGQHHSFSVSQQMQNSVRSNDKKAVYRHIVCSGANVNAVNKRM 179
           KFIHAKYAEK FVRKPK   +   V+QQ+ + VRSNDKKAVYRHI+ S A+VNAV K++
Sbjct: 611 KFIHAKYAEKAFVRKPKEIQYPHLVAQQIWDGVRSNDKKAVYRHIINSEADVNAVYKQV 669


>ref|XP_004152319.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
           AGD3-like [Cucumis sativus]
          Length = 1191

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/59 (66%), Positives = 47/59 (79%)
 Frame = +3

Query: 3   KFIHAKYAEKLFVRKPKGQHHSFSVSQQMQNSVRSNDKKAVYRHIVCSGANVNAVNKRM 179
           KFIHAKYAEK FVRKPK   +   V+QQ+ + VRSNDKKAVYRHI+ S A+VNAV K++
Sbjct: 608 KFIHAKYAEKAFVRKPKEIQYPHLVAQQIWDGVRSNDKKAVYRHIINSEADVNAVYKQV 666


>gb|AEL98882.1| ADP-ribosylation factor GTPase-activating protein, partial [Silene
           latifolia]
          Length = 725

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/55 (69%), Positives = 43/55 (78%)
 Frame = +3

Query: 3   KFIHAKYAEKLFVRKPKGQHHSFSVSQQMQNSVRSNDKKAVYRHIVCSGANVNAV 167
           KFIHAKYAEKLFVRKPK   H  S+SQQ+   VR+NDKKAVYR IV   A+VNA+
Sbjct: 623 KFIHAKYAEKLFVRKPKDTQHLRSLSQQIWEGVRTNDKKAVYRCIVNFEADVNAI 677


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