BLASTX nr result

ID: Coptis25_contig00026078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026078
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001771487.1| predicted protein [Physcomitrella patens sub...    68   7e-10
ref|XP_002263312.1| PREDICTED: uncharacterized protein LOC100261...    66   3e-09
gb|EAZ30506.1| hypothetical protein OsJ_14553 [Oryza sativa Japo...    62   5e-08
gb|EAY93866.1| hypothetical protein OsI_15642 [Oryza sativa Indi...    62   5e-08
tpg|DAA38179.1| TPA: hypothetical protein ZEAMMB73_126317 [Zea m...    61   8e-08

>ref|XP_001771487.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162677214|gb|EDQ63687.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 774

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/82 (45%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
 Frame = -3

Query: 281 QLKELAELN-----DN*CTTCGEEGHKDYACPSMNSTFSSHLSCDTCG-SSHSTANYPLT 120
           QL+ELA LN     D  C  CGE GH+ YACP+ +STF S +SC  CG   H T + PL 
Sbjct: 328 QLRELAALNGTIRDDEYCRLCGEPGHRQYACPARHSTFKSDVSCRICGDGGHPTIDCPLK 387

Query: 119 MSTPGNNVANQQGCFLVGGSGG 54
            S  GN + ++   FL    GG
Sbjct: 388 GSAQGNKMDDEYKNFLAELGGG 409


>ref|XP_002263312.1| PREDICTED: uncharacterized protein LOC100261746 [Vitis vinifera]
          Length = 751

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
 Frame = -3

Query: 281 QLKELAELND----N*CTTCGEEGHKDYACPSMNSTFSSHLSCDTCGS-SHSTANYPLTM 117
           QL EL +LN     N C  C +EGH  YACP + STF S LSCD CGS +H+T + PL  
Sbjct: 421 QLVELGKLNGERNKNMCRCCYDEGHPHYACPHLQSTFQSSLSCDICGSNNHATPSCPLIA 480

Query: 116 STPGNN 99
           S+ G+N
Sbjct: 481 SSQGSN 486


>gb|EAZ30506.1| hypothetical protein OsJ_14553 [Oryza sativa Japonica Group]
          Length = 684

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
 Frame = -3

Query: 281 QLKELAELN-----DN*CTTCGEEGHKDYACPSMNSTFSSHLSCDTCG-SSHSTANYPLT 120
           QL+ELA LN     D  C TCGE GH+ YACP+  STF S + C  CG   H T + P+ 
Sbjct: 200 QLRELAALNGTIRDDEFCRTCGEPGHRQYACPNRTSTFKSEVQCKICGDGGHPTIDCPV- 258

Query: 119 MSTPGNNVANQQGCFL--VGGS 60
             T G  + ++   FL  +GGS
Sbjct: 259 KGTTGKKMDDEYQNFLNELGGS 280


>gb|EAY93866.1| hypothetical protein OsI_15642 [Oryza sativa Indica Group]
          Length = 684

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
 Frame = -3

Query: 281 QLKELAELN-----DN*CTTCGEEGHKDYACPSMNSTFSSHLSCDTCG-SSHSTANYPLT 120
           QL+ELA LN     D  C TCGE GH+ YACP+  STF S + C  CG   H T + P+ 
Sbjct: 200 QLRELAALNGTIRDDEFCRTCGEPGHRQYACPNRTSTFKSEVQCKICGDGGHPTIDCPV- 258

Query: 119 MSTPGNNVANQQGCFL--VGGS 60
             T G  + ++   FL  +GGS
Sbjct: 259 KGTTGKKMDDEYQNFLNELGGS 280


>tpg|DAA38179.1| TPA: hypothetical protein ZEAMMB73_126317 [Zea mays]
          Length = 750

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
 Frame = -3

Query: 281 QLKELAELN-----DN*CTTCGEEGHKDYACPSMNSTFSSHLSCDTCG-SSHSTANYPLT 120
           QL+ELA LN     D  C TCGE GH+ YACP+  +TF S + C  CG   H T + P+ 
Sbjct: 291 QLRELAALNGTIRDDEFCRTCGEAGHRQYACPNKMNTFKSDVQCKICGDGGHPTIDCPV- 349

Query: 119 MSTPGNNVANQQGCFLVGGSGGLA 48
             T G  + ++   FL    GG A
Sbjct: 350 KGTSGKKMDDEYQNFLAELGGGSA 373


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