BLASTX nr result

ID: Coptis25_contig00026059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026059
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282529.1| PREDICTED: receptor protein kinase-like prot...   329   6e-88
ref|XP_002518686.1| conserved hypothetical protein [Ricinus comm...   318   1e-84
gb|AAM65927.1| unknown [Arabidopsis thaliana]                         311   2e-82
ref|NP_567960.1| uncharacterized protein [Arabidopsis thaliana] ...   310   3e-82
pdb|2APJ|A Chain A, X-Ray Structure Of Protein From Arabidopsis ...   308   1e-81

>ref|XP_002282529.1| PREDICTED: receptor protein kinase-like protein At4g34220-like [Vitis
            vinifera]
          Length = 1004

 Score =  329 bits (844), Expect = 6e-88
 Identities = 167/253 (66%), Positives = 195/253 (77%), Gaps = 2/253 (0%)
 Frame = -1

Query: 906  IETQTQTFNN--NKQIFILSGQSNMAGRGGVTSTHPKKFDGHLPPECQPDPKTLRFNAKH 733
            I +  Q+  N  +KQIFILSGQSNMAGRGGV   H  K+DG +PPEC PD   LR NA+ 
Sbjct: 755  IASSNQSTENRPSKQIFILSGQSNMAGRGGVNGHH--KWDGVVPPECSPDSSILRLNAQL 812

Query: 732  HWEEAHEPLHVDIDTKKTCGIGPGLVFANSVRAQDPSIDVIGLVPCAVGGTAIKEWERGS 553
            HWE A EPLH DIDTKK CG+GPG+ FAN+VR +   + V+GLVPCAVGGTAIKEW RG 
Sbjct: 813  HWESAREPLHADIDTKKACGVGPGMSFANAVRKR---VGVLGLVPCAVGGTAIKEWARGQ 869

Query: 552  HLYENMVKRARDSVKQGGEIKCLLWYQGESDTFPKHAAESYRVNLERLIKNVRSDLRFPL 373
             LYENMV RA++SVK GGEIK LLWYQGESDT   + A+SY+ N+E LI+NVR DL  P 
Sbjct: 870  PLYENMVNRAKESVKSGGEIKALLWYQGESDTSSYNDAKSYKDNMESLIQNVRQDLGSPS 929

Query: 372  LPIIQVAIASGDEAYIDKVREVQLGMEVENVVCVDAKGLELKYDHMHLTTEAQVKLGKML 193
            LPIIQVAIASGD  Y+++VRE Q  ++  NVVCVDAKGL LK DH+HLTTEAQV+LG+ML
Sbjct: 930  LPIIQVAIASGDSKYMERVREAQKEIDFPNVVCVDAKGLPLKEDHLHLTTEAQVRLGQML 989

Query: 192  ADAYLKNFPSSPS 154
            ADAYL NF   P+
Sbjct: 990  ADAYLANFAPPPA 1002


>ref|XP_002518686.1| conserved hypothetical protein [Ricinus communis]
           gi|223542067|gb|EEF43611.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 265

 Score =  318 bits (815), Expect = 1e-84
 Identities = 158/249 (63%), Positives = 192/249 (77%), Gaps = 9/249 (3%)
 Frame = -1

Query: 873 KQIFILSGQSNMAGRGGVTS---THPKKFDGHLPPECQPDPKTLRFNAKHHWEEAHEPLH 703
           K+IF+LSGQSNMAGRGGV      H K +DG +P EC+P    LR  A   W  A EPLH
Sbjct: 12  KRIFLLSGQSNMAGRGGVNKHPHQHHKHWDGIVPQECKPHQDILRLTANLRWVTAQEPLH 71

Query: 702 VDIDTKKTCGIGPGLVFANSVRAQ-----DPSIDVIGLVPCAVGGTAIKEWERGSHLYEN 538
            DID+KK CG+GPG+ FANSVR Q     D   +V+GLVPCAVGGTAIKEW RG  LY+ 
Sbjct: 72  ADIDSKKVCGVGPGMSFANSVRDQGHAGGDGGGEVVGLVPCAVGGTAIKEWGRGEKLYDM 131

Query: 537 MVKRARDSVKQGGEIKCLLWYQGESDTFPKHAAESYRVNLERLIKNVRSDLRFPLLPIIQ 358
           MVKRA++SVK GGEI+CLLWYQGESDT+ +H A++Y+ N+E+L+ NVR DL  P LPI+Q
Sbjct: 132 MVKRAKESVKDGGEIECLLWYQGESDTYTEHDADAYQGNMEKLVANVREDLGLPSLPIVQ 191

Query: 357 VAIASGDEAYIDKVREVQLGMEVENVVCVDAKGLELKYDHMHLTTEAQVKLGKMLADAYL 178
           VAI SGDE Y++KVRE QL M + NVVCVDAKGL+LK D++HLTT +QVKLG+MLA+AY+
Sbjct: 192 VAITSGDEKYLEKVREAQLKMNISNVVCVDAKGLQLKDDNLHLTTHSQVKLGQMLAEAYI 251

Query: 177 KNF-PSSPS 154
           K+F P SPS
Sbjct: 252 KHFAPPSPS 260


>gb|AAM65927.1| unknown [Arabidopsis thaliana]
          Length = 260

 Score =  311 bits (796), Expect = 2e-82
 Identities = 161/238 (67%), Positives = 181/238 (76%), Gaps = 4/238 (1%)
 Frame = -1

Query: 870 QIFILSGQSNMAGRGGVTSTHPKK---FDGHLPPECQPDPKTLRFNAKHHWEEAHEPLHV 700
           QIFILSGQSNMAGRGGV   H      +D  LPPEC P+   LR +A   WEEAHEPLHV
Sbjct: 23  QIFILSGQSNMAGRGGVVKDHHHNRWVWDKILPPECAPNSSILRLSADLRWEEAHEPLHV 82

Query: 699 DIDTKKTCGIGPGLVFANSVRAQ-DPSIDVIGLVPCAVGGTAIKEWERGSHLYENMVKRA 523
           DIDT K CG+GPG+ FAN+V+ + +    VIGLVPCA GGTAIKEWERGSHLYE MVKR 
Sbjct: 83  DIDTGKVCGVGPGMAFANAVKNRVETDSAVIGLVPCASGGTAIKEWERGSHLYERMVKRT 142

Query: 522 RDSVKQGGEIKCLLWYQGESDTFPKHAAESYRVNLERLIKNVRSDLRFPLLPIIQVAIAS 343
            +S K GGEIK +LWYQGESD    H AESY  N++RLIKN+R DL  P LPIIQVAIAS
Sbjct: 143 EESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAIAS 202

Query: 342 GDEAYIDKVREVQLGMEVENVVCVDAKGLELKYDHMHLTTEAQVKLGKMLADAYLKNF 169
           G   YIDKVRE QLG+++ NVVCVDAKGL LK D++HLTTEAQV+LG  LA AYL NF
Sbjct: 203 GG-GYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSLAQAYLSNF 259


>ref|NP_567960.1| uncharacterized protein [Arabidopsis thaliana]
           gi|30689964|ref|NP_849493.1| uncharacterized protein
           [Arabidopsis thaliana]
           gi|109940187|sp|Q8L9J9.2|CAES_ARATH RecName:
           Full=Probable carbohydrate esterase At4g34215
           gi|332660941|gb|AEE86341.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332660942|gb|AEE86342.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 260

 Score =  310 bits (795), Expect = 3e-82
 Identities = 161/238 (67%), Positives = 181/238 (76%), Gaps = 4/238 (1%)
 Frame = -1

Query: 870 QIFILSGQSNMAGRGGVTSTHPKK---FDGHLPPECQPDPKTLRFNAKHHWEEAHEPLHV 700
           QIFILSGQSNMAGRGGV   H      +D  LPPEC P+   LR +A   WEEAHEPLHV
Sbjct: 23  QIFILSGQSNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLRWEEAHEPLHV 82

Query: 699 DIDTKKTCGIGPGLVFANSVRAQ-DPSIDVIGLVPCAVGGTAIKEWERGSHLYENMVKRA 523
           DIDT K CG+GPG+ FAN+V+ + +    VIGLVPCA GGTAIKEWERGSHLYE MVKR 
Sbjct: 83  DIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERGSHLYERMVKRT 142

Query: 522 RDSVKQGGEIKCLLWYQGESDTFPKHAAESYRVNLERLIKNVRSDLRFPLLPIIQVAIAS 343
            +S K GGEIK +LWYQGESD    H AESY  N++RLIKN+R DL  P LPIIQVAIAS
Sbjct: 143 EESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAIAS 202

Query: 342 GDEAYIDKVREVQLGMEVENVVCVDAKGLELKYDHMHLTTEAQVKLGKMLADAYLKNF 169
           G   YIDKVRE QLG+++ NVVCVDAKGL LK D++HLTTEAQV+LG  LA AYL NF
Sbjct: 203 GG-GYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSLAQAYLSNF 259


>pdb|2APJ|A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana
           At4g34215 At 1.6 Angstrom Resolution
           gi|75766301|pdb|2APJ|B Chain B, X-Ray Structure Of
           Protein From Arabidopsis Thaliana At4g34215 At 1.6
           Angstrom Resolution gi|75766302|pdb|2APJ|C Chain C,
           X-Ray Structure Of Protein From Arabidopsis Thaliana
           At4g34215 At 1.6 Angstrom Resolution
           gi|75766303|pdb|2APJ|D Chain D, X-Ray Structure Of
           Protein From Arabidopsis Thaliana At4g34215 At 1.6
           Angstrom Resolution
          Length = 260

 Score =  308 bits (790), Expect = 1e-81
 Identities = 160/238 (67%), Positives = 180/238 (75%), Gaps = 4/238 (1%)
 Frame = -1

Query: 870 QIFILSGQSNMAGRGGVTSTHPKK---FDGHLPPECQPDPKTLRFNAKHHWEEAHEPLHV 700
           QIFILSGQ NMAGRGGV   H      +D  LPPEC P+   LR +A   WEEAHEPLHV
Sbjct: 23  QIFILSGQXNMAGRGGVFKDHHNNRWVWDKILPPECAPNSSILRLSADLRWEEAHEPLHV 82

Query: 699 DIDTKKTCGIGPGLVFANSVRAQ-DPSIDVIGLVPCAVGGTAIKEWERGSHLYENMVKRA 523
           DIDT K CG+GPG+ FAN+V+ + +    VIGLVPCA GGTAIKEWERGSHLYE MVKR 
Sbjct: 83  DIDTGKVCGVGPGMAFANAVKNRLETDSAVIGLVPCASGGTAIKEWERGSHLYERMVKRT 142

Query: 522 RDSVKQGGEIKCLLWYQGESDTFPKHAAESYRVNLERLIKNVRSDLRFPLLPIIQVAIAS 343
            +S K GGEIK +LWYQGESD    H AESY  N++RLIKN+R DL  P LPIIQVAIAS
Sbjct: 143 EESRKCGGEIKAVLWYQGESDVLDIHDAESYGNNMDRLIKNLRHDLNLPSLPIIQVAIAS 202

Query: 342 GDEAYIDKVREVQLGMEVENVVCVDAKGLELKYDHMHLTTEAQVKLGKMLADAYLKNF 169
           G   YIDKVRE QLG+++ NVVCVDAKGL LK D++HLTTEAQV+LG  LA AYL NF
Sbjct: 203 GG-GYIDKVREAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSLAQAYLSNF 259


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