BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026057
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...   314   8e-84
ref|XP_002529286.1| pentatricopeptide repeat-containing protein,...   287   1e-75
ref|NP_001043343.2| Os01g0559500 [Oryza sativa Japonica Group] g...   272   5e-71
gb|EEC70890.1| hypothetical protein OsI_02428 [Oryza sativa Indi...   272   5e-71
dbj|BAD87953.1| putative PPR protein [Oryza sativa Japonica Group]    272   5e-71

>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Vitis vinifera]
           gi|298204537|emb|CBI23812.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score =  314 bits (805), Expect = 8e-84
 Identities = 144/218 (66%), Positives = 187/218 (85%)
 Frame = +3

Query: 12  AKRAAILNIQRAPELVSALARYGEILEVQDLNIILRHYGTKNKWKDVSMIFDWMRKHDKI 191
           A+++AIL +Q++ +L SALAR G++L+VQDLN+ILRH+G   +W+D+S +FDWM+KH+KI
Sbjct: 74  ARQSAILEVQQSSDLGSALARLGDMLKVQDLNVILRHFGKLCRWQDLSQLFDWMQKHEKI 133

Query: 192 NFASYSSFIKFMGKGFNPVKALEVYNSIQDDSLRTNVSICNSILGCLVKNGKFESAIKLF 371
            F+SYS++IKFMGK  NP+KALE+YNSIQD+S+R NVS+CNS+L CL++NGKFE+++KLF
Sbjct: 134 TFSSYSTYIKFMGKSLNPIKALEIYNSIQDESVRNNVSVCNSVLSCLIRNGKFENSLKLF 193

Query: 372 DEMKRGGLIPDVVTYSTLLAGCRKDKNGYPKAMHLVEELKRNRLQMDDVIYGTLLAVCAS 551
            +MK+ GL PD VTYSTLLAGC K K+GY KA+ LV+E++R+RL MD VIYGTLLAVCAS
Sbjct: 194 HQMKQDGLRPDAVTYSTLLAGCMKVKHGYSKALELVQEMERSRLPMDSVIYGTLLAVCAS 253

Query: 552 NNRCKEAEEVSQLMKDDGFKPNVFHYSSLLNAYAVDGN 665
           NNRCKEAE     MKD+G  PNVFHYSSLLNAY+ DG+
Sbjct: 254 NNRCKEAENYFNQMKDEGHLPNVFHYSSLLNAYSADGD 291


>ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531275|gb|EEF33118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 672

 Score =  287 bits (734), Expect = 1e-75
 Identities = 133/218 (61%), Positives = 177/218 (81%)
 Frame = +3

Query: 12  AKRAAILNIQRAPELVSALARYGEILEVQDLNIILRHYGTKNKWKDVSMIFDWMRKHDKI 191
           A++AAIL +Q++P+L SAL R G IL+ QDLN+ILR+ G +++W+D+S +FDWM++H KI
Sbjct: 85  ARQAAILEVQQSPDLDSALRRLGAILKAQDLNVILRNLGKQSRWQDLSKLFDWMQQHSKI 144

Query: 192 NFASYSSFIKFMGKGFNPVKALEVYNSIQDDSLRTNVSICNSILGCLVKNGKFESAIKLF 371
           + +SY+S++KFMGK  NP KALE+YNSI D+S++ NV ICNS+L CLV++GKF+ ++KLF
Sbjct: 145 SVSSYTSYMKFMGKSLNPAKALEIYNSIADESVKNNVFICNSVLSCLVRSGKFDISLKLF 204

Query: 372 DEMKRGGLIPDVVTYSTLLAGCRKDKNGYPKAMHLVEELKRNRLQMDDVIYGTLLAVCAS 551
            +MK+ GL PD +TYSTLL+GC K K+GY K +  V+ELK N LQMD VIYGT+LAVCAS
Sbjct: 205 HKMKQNGLTPDTITYSTLLSGCIKAKDGYSKTLDFVQELKYNGLQMDTVIYGTILAVCAS 264

Query: 552 NNRCKEAEEVSQLMKDDGFKPNVFHYSSLLNAYAVDGN 665
           +NRC+EAE     MK++G  PNVFHYSSLLNAYA  GN
Sbjct: 265 HNRCEEAESYFSQMKNEGHLPNVFHYSSLLNAYASSGN 302


>ref|NP_001043343.2| Os01g0559500 [Oryza sativa Japonica Group]
           gi|255673364|dbj|BAF05257.2| Os01g0559500 [Oryza sativa
           Japonica Group]
          Length = 690

 Score =  272 bits (695), Expect = 5e-71
 Identities = 124/217 (57%), Positives = 168/217 (77%)
 Frame = +3

Query: 15  KRAAILNIQRAPELVSALARYGEILEVQDLNIILRHYGTKNKWKDVSMIFDWMRKHDKIN 194
           +R+A+  ++ AP+ V+AL R+ ++L+ QD NIILRHYG   +W ++S +F WM++HD +N
Sbjct: 62  RRSAVAEVKAAPDPVAALTRFEDVLQTQDCNIILRHYGETRRWDELSKVFGWMQEHDMLN 121

Query: 195 FASYSSFIKFMGKGFNPVKALEVYNSIQDDSLRTNVSICNSILGCLVKNGKFESAIKLFD 374
            ASYSS+ K++G   NP +AL+VY +I+++  R +VS+CNS+LGCLVKNG+F+S+ KL+D
Sbjct: 122 IASYSSYFKYLGLSRNPARALQVYGAIRENPTRIHVSVCNSVLGCLVKNGRFDSSFKLYD 181

Query: 375 EMKRGGLIPDVVTYSTLLAGCRKDKNGYPKAMHLVEELKRNRLQMDDVIYGTLLAVCASN 554
           EM R GL PD+ TYSTLL+GC K K GY KAM LV EL     QMD VIYGTLLA+CAS+
Sbjct: 182 EMIREGLSPDLFTYSTLLSGCMKLKQGYTKAMELVNELNSRGFQMDSVIYGTLLAICASH 241

Query: 555 NRCKEAEEVSQLMKDDGFKPNVFHYSSLLNAYAVDGN 665
           N C++AEE  Q MKD+G KPN+FHYSSLLNAY+ + N
Sbjct: 242 NCCEKAEEYFQKMKDEGHKPNLFHYSSLLNAYSENAN 278


>gb|EEC70890.1| hypothetical protein OsI_02428 [Oryza sativa Indica Group]
          Length = 647

 Score =  272 bits (695), Expect = 5e-71
 Identities = 124/217 (57%), Positives = 168/217 (77%)
 Frame = +3

Query: 15  KRAAILNIQRAPELVSALARYGEILEVQDLNIILRHYGTKNKWKDVSMIFDWMRKHDKIN 194
           +R+A+  ++ AP+ V+AL R+ ++L+ QD NIILRHYG   +W ++S +F WM++HD +N
Sbjct: 59  RRSAVAEVKAAPDPVAALTRFEDVLQTQDCNIILRHYGETRRWDELSKVFGWMQEHDMLN 118

Query: 195 FASYSSFIKFMGKGFNPVKALEVYNSIQDDSLRTNVSICNSILGCLVKNGKFESAIKLFD 374
            ASYSS+ KF+G   NP +AL+VY +I+++  R +VS+CNS+LGCLVKNG+F+S+ KL+D
Sbjct: 119 IASYSSYFKFLGLSRNPARALQVYGAIRENPTRIHVSVCNSVLGCLVKNGRFDSSFKLYD 178

Query: 375 EMKRGGLIPDVVTYSTLLAGCRKDKNGYPKAMHLVEELKRNRLQMDDVIYGTLLAVCASN 554
           EM R GL PD+ TYSTLL+GC K K GY KA+ LV EL     QMD VIYGTLLA+CAS+
Sbjct: 179 EMIREGLSPDLFTYSTLLSGCMKLKQGYTKALELVNELNSRGFQMDSVIYGTLLAICASH 238

Query: 555 NRCKEAEEVSQLMKDDGFKPNVFHYSSLLNAYAVDGN 665
           N C++AEE  Q MKD+G KPN+FHYSSLLNAY+ + N
Sbjct: 239 NCCEKAEEYFQKMKDEGHKPNLFHYSSLLNAYSENAN 275


>dbj|BAD87953.1| putative PPR protein [Oryza sativa Japonica Group]
          Length = 650

 Score =  272 bits (695), Expect = 5e-71
 Identities = 124/217 (57%), Positives = 168/217 (77%)
 Frame = +3

Query: 15  KRAAILNIQRAPELVSALARYGEILEVQDLNIILRHYGTKNKWKDVSMIFDWMRKHDKIN 194
           +R+A+  ++ AP+ V+AL R+ ++L+ QD NIILRHYG   +W ++S +F WM++HD +N
Sbjct: 62  RRSAVAEVKAAPDPVAALTRFEDVLQTQDCNIILRHYGETRRWDELSKVFGWMQEHDMLN 121

Query: 195 FASYSSFIKFMGKGFNPVKALEVYNSIQDDSLRTNVSICNSILGCLVKNGKFESAIKLFD 374
            ASYSS+ K++G   NP +AL+VY +I+++  R +VS+CNS+LGCLVKNG+F+S+ KL+D
Sbjct: 122 IASYSSYFKYLGLSRNPARALQVYGAIRENPTRIHVSVCNSVLGCLVKNGRFDSSFKLYD 181

Query: 375 EMKRGGLIPDVVTYSTLLAGCRKDKNGYPKAMHLVEELKRNRLQMDDVIYGTLLAVCASN 554
           EM R GL PD+ TYSTLL+GC K K GY KAM LV EL     QMD VIYGTLLA+CAS+
Sbjct: 182 EMIREGLSPDLFTYSTLLSGCMKLKQGYTKAMELVNELNSRGFQMDSVIYGTLLAICASH 241

Query: 555 NRCKEAEEVSQLMKDDGFKPNVFHYSSLLNAYAVDGN 665
           N C++AEE  Q MKD+G KPN+FHYSSLLNAY+ + N
Sbjct: 242 NCCEKAEEYFQKMKDEGHKPNLFHYSSLLNAYSENAN 278