BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026053
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein lig...   172   3e-41
emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]   172   3e-41
ref|XP_002329104.1| predicted protein [Populus trichocarpa] gi|2...   166   1e-39
ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinu...   166   2e-39
ref|XP_002316910.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39

>ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
           vinifera] gi|302143037|emb|CBI20332.3| unnamed protein
           product [Vitis vinifera]
          Length = 492

 Score =  172 bits (435), Expect = 3e-41
 Identities = 80/96 (83%), Positives = 87/96 (90%)
 Frame = -2

Query: 290 GLSFTAFLTRQGHVYTCGSNAHGQLGHGDNVDRPTPKIVEALEGVGCVVQIAAGPSYTLA 111
           GLSFT FLT +GHVYTCG+N HGQLGHGD VDR TPKIVE LEGVG VVQIAAGPSY +A
Sbjct: 224 GLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMA 283

Query: 110 VMDDGTVYSFGSGTNFCLGHGEQHNELQPRAIQSFK 3
           V DDGTV+SFGSG+NFCLGHGEQHNEL+PRAIQSF+
Sbjct: 284 VTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFR 319



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
 Frame = -2

Query: 275 AFLTRQGHVYTCGSNAHGQLGHGDNVDRPT--PKIVEALEGVGCVVQIAAGPSYTLAVMD 102
           AF+ + G V+TCG N+    GHGD V RP   P++VEAL+GV C  Q+AAG S+T+ +  
Sbjct: 176 AFVMQSGEVFTCGDNSSFCCGHGDTV-RPIFRPRLVEALKGVPCK-QVAAGLSFTVFLTM 233

Query: 101 DGTVYSFGSGTNFCLGHGEQHNELQPRAIQ 12
            G VY+ G+ T+  LGHG+  +   P+ ++
Sbjct: 234 KGHVYTCGTNTHGQLGHGDTVDRRTPKIVE 263


>emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
          Length = 511

 Score =  172 bits (435), Expect = 3e-41
 Identities = 80/96 (83%), Positives = 87/96 (90%)
 Frame = -2

Query: 290 GLSFTAFLTRQGHVYTCGSNAHGQLGHGDNVDRPTPKIVEALEGVGCVVQIAAGPSYTLA 111
           GLSFT FLT +GHVYTCG+N HGQLGHGD VDR TPKIVE LEGVG VVQIAAGPSY +A
Sbjct: 224 GLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMA 283

Query: 110 VMDDGTVYSFGSGTNFCLGHGEQHNELQPRAIQSFK 3
           V DDGTV+SFGSG+NFCLGHGEQHNEL+PRAIQSF+
Sbjct: 284 VTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFR 319



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
 Frame = -2

Query: 275 AFLTRQGHVYTCGSNAHGQLGHGDNVDRPT--PKIVEALEGVGCVVQIAAGPSYTLAVMD 102
           AF+ + G V+TCG N+    GHGD V RP   P++VEAL+GV C  Q+AAG S+T+ +  
Sbjct: 176 AFVMQSGEVFTCGDNSSFCCGHGDTV-RPIFRPRLVEALKGVPCK-QVAAGLSFTVFLTM 233

Query: 101 DGTVYSFGSGTNFCLGHGEQHNELQPRAIQ 12
            G VY+ G+ T+  LGHG+  +   P+ ++
Sbjct: 234 KGHVYTCGTNTHGQLGHGDTVDRRTPKIVE 263


>ref|XP_002329104.1| predicted protein [Populus trichocarpa] gi|222869773|gb|EEF06904.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  166 bits (421), Expect = 1e-39
 Identities = 75/96 (78%), Positives = 85/96 (88%)
 Frame = -2

Query: 290 GLSFTAFLTRQGHVYTCGSNAHGQLGHGDNVDRPTPKIVEALEGVGCVVQIAAGPSYTLA 111
           GL+FT FLTRQG +YTCGSN HGQLGHGD +DRPTPKI+E LEG+G VVQIAAGPSY LA
Sbjct: 224 GLNFTVFLTRQGQLYTCGSNTHGQLGHGDTLDRPTPKIIELLEGIGPVVQIAAGPSYVLA 283

Query: 110 VMDDGTVYSFGSGTNFCLGHGEQHNELQPRAIQSFK 3
           V D+G VYSFG G+NFCLGHGEQH+E QPRAIQ+F+
Sbjct: 284 VTDNGVVYSFGYGSNFCLGHGEQHDEFQPRAIQTFR 319


>ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223532017|gb|EEF33828.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 497

 Score =  166 bits (420), Expect = 2e-39
 Identities = 73/96 (76%), Positives = 83/96 (86%)
 Frame = -2

Query: 290 GLSFTAFLTRQGHVYTCGSNAHGQLGHGDNVDRPTPKIVEALEGVGCVVQIAAGPSYTLA 111
           GL+FT FLTR GHVY+CG+N HGQLGHGD +DRPTPKI+E+ EG+G V QIAAGPSY LA
Sbjct: 224 GLNFTVFLTRTGHVYSCGTNTHGQLGHGDTLDRPTPKIIESFEGIGSVAQIAAGPSYVLA 283

Query: 110 VMDDGTVYSFGSGTNFCLGHGEQHNELQPRAIQSFK 3
           V D G VYSFGSG+NFCLGHGEQHNE  PRAIQ+F+
Sbjct: 284 VTDSGVVYSFGSGSNFCLGHGEQHNEFHPRAIQTFR 319



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
 Frame = -2

Query: 275 AFLTRQGHVYTCGSNAHGQLGHGDNVDRPT--PKIVEALEGVGCVVQIAAGPSYTLAVMD 102
           A++   G V+TCG N+    GH D   RP   P+ VEAL+GV C  Q+AAG ++T+ +  
Sbjct: 176 AYILESGEVFTCGDNSSFCCGHQDT-SRPIFRPRFVEALKGVPCK-QVAAGLNFTVFLTR 233

Query: 101 DGTVYSFGSGTNFCLGHGEQHNELQPRAIQSFK 3
            G VYS G+ T+  LGHG+  +   P+ I+SF+
Sbjct: 234 TGHVYSCGTNTHGQLGHGDTLDRPTPKIIESFE 266


>ref|XP_002316910.1| predicted protein [Populus trichocarpa] gi|222859975|gb|EEE97522.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  164 bits (414), Expect = 9e-39
 Identities = 74/96 (77%), Positives = 84/96 (87%)
 Frame = -2

Query: 290 GLSFTAFLTRQGHVYTCGSNAHGQLGHGDNVDRPTPKIVEALEGVGCVVQIAAGPSYTLA 111
           GL+FT FLTRQG +YTCG+N HGQLGHGD  DRPTPKI+E LEGVG VVQIAAGPSY LA
Sbjct: 224 GLNFTVFLTRQGQLYTCGTNTHGQLGHGDTQDRPTPKIIELLEGVGSVVQIAAGPSYVLA 283

Query: 110 VMDDGTVYSFGSGTNFCLGHGEQHNELQPRAIQSFK 3
           V D+G VYSFGSG+N CLGHGEQH+E +PRAIQ+F+
Sbjct: 284 VTDNGVVYSFGSGSNLCLGHGEQHDEFRPRAIQTFR 319



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/90 (38%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
 Frame = -2

Query: 275 AFLTRQGHVYTCGSNAHGQLGHGDNVDRPT--PKIVEALEGVGCVVQIAAGPSYTLAVMD 102
           AF+ + G V+TCG N+    GH D  +RP   P++VEAL+GV C  Q+A G ++T+ +  
Sbjct: 176 AFVLQSGEVFTCGDNSSFCCGHNDT-NRPIFRPRLVEALKGVPCK-QVAVGLNFTVFLTR 233

Query: 101 DGTVYSFGSGTNFCLGHGEQHNELQPRAIQ 12
            G +Y+ G+ T+  LGHG+  +   P+ I+
Sbjct: 234 QGQLYTCGTNTHGQLGHGDTQDRPTPKIIE 263



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
 Frame = -2

Query: 281 FTAFLTRQGHVYTCGSNAHGQLGHGDNVDRPTPKIVEALEGVGCVVQIAAGPSYTLAVMD 102
           +   L R   VY+CGS+  G LGHG    +           +  V+Q++A  ++   V+ 
Sbjct: 121 YHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLAYVIQVSASHNHAAFVLQ 180

Query: 101 DGTVYSFGSGTNFCLGHGEQHNEL-QPRAIQSFK 3
            G V++ G  ++FC GH + +  + +PR +++ K
Sbjct: 181 SGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALK 214