BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026029
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635571.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    72   7e-20
ref|XP_002867100.1| hypothetical protein ARALYDRAFT_491167 [Arab...    70   4e-19
ref|NP_195217.1| DEAD-box ATP-dependent RNA helicase 16 [Arabido...    70   4e-19
ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    69   1e-18
ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    66   3e-18

>ref|XP_003635571.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like, partial
           [Vitis vinifera]
          Length = 301

 Score = 71.6 bits (174), Expect(2) = 7e-20
 Identities = 38/48 (79%), Positives = 39/48 (81%)
 Frame = -2

Query: 145 SSSTLKIAPSVFVLVPTRELSQQVYSEVLSLIESCRVQLKVVQLTGGM 2
           S S  K+APS FVLVPTREL QQVYSEVLSLIE CR QLKVVQLT  M
Sbjct: 90  SESRNKLAPSAFVLVPTRELCQQVYSEVLSLIELCRGQLKVVQLTSSM 137



 Score = 50.4 bits (119), Expect(2) = 7e-20
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = -3

Query: 225 LEGKDVVARAKTGSGKTYAYLLPSLQ 148
           LEGKDVVARAKTGSGKT+AYLLP LQ
Sbjct: 59  LEGKDVVARAKTGSGKTFAYLLPLLQ 84


>ref|XP_002867100.1| hypothetical protein ARALYDRAFT_491167 [Arabidopsis lyrata subsp.
           lyrata] gi|297312936|gb|EFH43359.1| hypothetical protein
           ARALYDRAFT_491167 [Arabidopsis lyrata subsp. lyrata]
          Length = 634

 Score = 70.5 bits (171), Expect(2) = 4e-19
 Identities = 35/52 (67%), Positives = 41/52 (78%)
 Frame = -2

Query: 157 FASNSSSTLKIAPSVFVLVPTRELSQQVYSEVLSLIESCRVQLKVVQLTGGM 2
           F+++S S  K+APS F+LVP+REL  QVYSEV SLIE CRVQLK VQLT  M
Sbjct: 111 FSADSGSKKKLAPSAFILVPSRELCHQVYSEVSSLIELCRVQLKAVQLTSSM 162



 Score = 48.9 bits (115), Expect(2) = 4e-19
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = -3

Query: 225 LEGKDVVARAKTGSGKTYAYLLPSLQ 148
           LEGKDVVARAKTGSGKT AYLLP LQ
Sbjct: 83  LEGKDVVARAKTGSGKTLAYLLPLLQ 108


>ref|NP_195217.1| DEAD-box ATP-dependent RNA helicase 16 [Arabidopsis thaliana]
           gi|75337761|sp|Q9SW44.1|RH16_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 16
           gi|5123708|emb|CAB45452.1| RNA helicase (RH16)
           [Arabidopsis thaliana] gi|7270442|emb|CAB80208.1| RNA
           helicase (RH16) [Arabidopsis thaliana]
           gi|27754373|gb|AAO22635.1| putative DEAD/DEAH box RNA
           helicase protein [Arabidopsis thaliana]
           gi|28394057|gb|AAO42436.1| putative DEAD/DEAH box RNA
           helicase protein [Arabidopsis thaliana]
           gi|332661036|gb|AEE86436.1| DEAD-box ATP-dependent RNA
           helicase 16 [Arabidopsis thaliana]
          Length = 626

 Score = 70.5 bits (171), Expect(2) = 4e-19
 Identities = 35/52 (67%), Positives = 42/52 (80%)
 Frame = -2

Query: 157 FASNSSSTLKIAPSVFVLVPTRELSQQVYSEVLSLIESCRVQLKVVQLTGGM 2
           F+++S S  K+APS F+LVP+REL QQVY+EV SLIE CRVQLK VQLT  M
Sbjct: 109 FSADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSM 160



 Score = 48.9 bits (115), Expect(2) = 4e-19
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = -3

Query: 225 LEGKDVVARAKTGSGKTYAYLLPSLQ 148
           LEGKDVVARAKTGSGKT AYLLP LQ
Sbjct: 81  LEGKDVVARAKTGSGKTLAYLLPLLQ 106


>ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Glycine
           max]
          Length = 601

 Score = 68.9 bits (167), Expect(2) = 1e-18
 Identities = 36/52 (69%), Positives = 41/52 (78%)
 Frame = -2

Query: 157 FASNSSSTLKIAPSVFVLVPTRELSQQVYSEVLSLIESCRVQLKVVQLTGGM 2
           F +NS    K+AP+ FVLVPTRELSQQVY+EV SL+E CRVQLKVVQL   M
Sbjct: 85  FTANSDRK-KLAPNAFVLVPTRELSQQVYAEVKSLVELCRVQLKVVQLNSNM 135



 Score = 48.9 bits (115), Expect(2) = 1e-18
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = -3

Query: 225 LEGKDVVARAKTGSGKTYAYLLPSLQ 148
           LEGKDVVARAKTGSGKT AYLLP LQ
Sbjct: 57  LEGKDVVARAKTGSGKTLAYLLPLLQ 82


>ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
           sativus] gi|449508529|ref|XP_004163338.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
           sativus]
          Length = 596

 Score = 65.9 bits (159), Expect(2) = 3e-18
 Identities = 33/50 (66%), Positives = 38/50 (76%)
 Frame = -2

Query: 151 SNSSSTLKIAPSVFVLVPTRELSQQVYSEVLSLIESCRVQLKVVQLTGGM 2
           + SS+  K  PS  VLVPTRELSQQVY E+ SLIE+CRVQ+KV QLT  M
Sbjct: 85  TGSSTKKKSGPSAVVLVPTRELSQQVYKEISSLIETCRVQVKVAQLTSSM 134



 Score = 50.4 bits (119), Expect(2) = 3e-18
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = -3

Query: 225 LEGKDVVARAKTGSGKTYAYLLPSLQ 148
           LEGKDVVARAKTGSGKT+AYLLP LQ
Sbjct: 56  LEGKDVVARAKTGSGKTFAYLLPLLQ 81