BLASTX nr result

ID: Coptis25_contig00026028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026028
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333002.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002309078.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002309077.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002309076.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_003571821.1| PREDICTED: L-type lectin-domain containing r...    61   8e-08

>ref|XP_002333002.1| predicted protein [Populus trichocarpa] gi|222834497|gb|EEE72974.1|
           predicted protein [Populus trichocarpa]
          Length = 546

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/85 (48%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
 Frame = +3

Query: 3   VLKLGLLCSHPMPTARPNMRQVVQYLDRDXXXXXXXXXXXXXXXXXXAILHGTEGFDEFV 182
           VLKLGL+CSH  P ARPNMRQVVQ+L+ D                  +     EGFDEF 
Sbjct: 464 VLKLGLMCSHSEPAARPNMRQVVQFLEGDVPLPDISSLCLSASGLTFS---HREGFDEFA 520

Query: 183 NSY*SFLER----SSSVAESVLSAG 245
           NSY S +++    SSSV ES+LS G
Sbjct: 521 NSYPSSMDQAFAHSSSVTESLLSGG 545


>ref|XP_002309078.1| predicted protein [Populus trichocarpa] gi|222855054|gb|EEE92601.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
 Frame = +3

Query: 3   VLKLGLLCSHPMPTARPNMRQVVQYLDRDXXXXXXXXXXXXXXXXXXAILHGTEGF--DE 176
           VLKLGL+CSH  P ARP+MRQVVQ+L+ D                  +   G + F  D+
Sbjct: 447 VLKLGLMCSHSEPAARPSMRQVVQFLEGDVRLPDISPLRLSTSGLTFSHREGFDDFAIDD 506

Query: 177 FVNSY*SFLER----SSSVAESVLSAG 245
           F NSY S +++    SSSVAES+LS G
Sbjct: 507 FANSYPSSMDKAFAHSSSVAESLLSGG 533


>ref|XP_002309077.1| predicted protein [Populus trichocarpa] gi|222855053|gb|EEE92600.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
 Frame = +3

Query: 3   VLKLGLLCSHPMPTARPNMRQVVQYLDRDXXXXXXXXXXXXXXXXXXAILHGTEGF--DE 176
           VLKLGL+CSH  P ARP+MRQVVQ+L+ D                  +   G + F  D+
Sbjct: 199 VLKLGLMCSHSEPAARPSMRQVVQFLEGDVRLPDISPLRLSTSGLTFSHREGFDDFAIDD 258

Query: 177 FVNSY*SFLER----SSSVAESVLSAG 245
           F NSY S +++    SSSVAES+LS G
Sbjct: 259 FANSYPSSMDKAFAHSSSVAESLLSGG 285


>ref|XP_002309076.1| predicted protein [Populus trichocarpa] gi|222855052|gb|EEE92599.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
 Frame = +3

Query: 3   VLKLGLLCSHPMPTARPNMRQVVQYLDRDXXXXXXXXXXXXXXXXXXAILHGTEGFDEFV 182
           VLKLGL+CSH  P ARP MRQVVQ+L+ D                  +     EGFDEF 
Sbjct: 28  VLKLGLMCSHSEPAARPRMRQVVQFLEGDVPLPDISPLCLSASGLTFS---HREGFDEFA 84

Query: 183 NSY*SFLER----SSSVAESVLSAG 245
            SY S +++    SSSVAES+LS G
Sbjct: 85  ISYPSSMDQAFAHSSSVAESLLSGG 109


>ref|XP_003571821.1| PREDICTED: L-type lectin-domain containing receptor kinase
           IV.2-like [Brachypodium distachyon]
          Length = 687

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/81 (45%), Positives = 44/81 (54%)
 Frame = +3

Query: 3   VLKLGLLCSHPMPTARPNMRQVVQYLDRDXXXXXXXXXXXXXXXXXXAILHGTEGFDEFV 182
           VL+LGL+CSHP P ARP MRQV+QYLD D                  A++   +GFD +V
Sbjct: 612 VLRLGLVCSHPAPAARPTMRQVLQYLDGD--APMPEPAPTYRSFTTQAMMQNADGFDSYV 669

Query: 183 NSY*SFLERSSSVAESVLSAG 245
            SY       SSV  SVLS G
Sbjct: 670 ASY-----PLSSVGASVLSIG 685


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