BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026015
         (905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   103   1e-21
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...   103   7e-20
emb|CAH65761.1| H0215A08.3 [Oryza sativa Indica Group]                 80   1e-17
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...    95   3e-17
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    94   4e-17

>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  103 bits (256), Expect(2) = 1e-21
 Identities = 55/211 (26%), Positives = 117/211 (55%)
 Frame = +1

Query: 259 IEDAERKIKPWARHKFSNLHVRVEQAREWLYDVQRQVQANPWDQFLGQKEKEALQRYNEL 438
           ++  +R +K +   KFS  H +VE+ R  L  VQ   + +   + L ++EK+ + +  + 
Sbjct: 281 LQAVKRALKSFHSKKFSKAHCQVEELRRKLAAVQALPEVSQVSE-LQEEEKDLIAQLRKW 339

Query: 439 ASIEAAEILSKQEGEWMREVDKCTAFFFKSLEEKKARSGIWVIQNSQGANVSGHAEVTKA 618
           ++I+ + +  K   +W+   D  + FFF +++ +KAR+ I ++QN +G  ++ + E+   
Sbjct: 340 STIDESILKQKSRIQWLSLGDSNSKFFFTAIKVRKARNKIVLLQNDRGDQLTENTEIQNE 399

Query: 619 VVNYYSEILGTHAADISEDEFFNNLQIKARISPNMKYVLEAEVTSKEVKRALFDMKENSA 798
           + N+Y  +LGT ++ +   +  + +++ A++S      L   +T +E+ +AL D+ +  A
Sbjct: 400 ICNFYRRLLGTSSSQLEAID-LHVVRVGAKLSATSCAQLVQPITIQEIDQALADIDDTKA 458

Query: 799 PGLDGFTPLFFTICWSIVGYDFTAAIINAFK 891
           PGLDGF  +FF   W ++  +    I++ F+
Sbjct: 459 PGLDGFNSVFFKKSWLVIKQEIYEGILDFFE 489



 Score = 26.9 bits (58), Expect(2) = 1e-21
 Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
 Frame = +2

Query: 98  DHSPILLLWN*LASK----AWPFRFKSYWVEQKDFQRILQEVWQVKIYSNPMYILIQKLK 265
           DHSP  L++N LA++      PF+F ++  +Q  F  +++E W    +   M  +  +L+
Sbjct: 226 DHSP--LIFN-LATQHDEGGRPFKFLNFLADQNGFVEVVKEAWGSANHRFKMKNIWVRLQ 282

Query: 266 MLKERL 283
            +K  L
Sbjct: 283 AVKRAL 288


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score =  103 bits (256), Expect = 7e-20
 Identities = 59/211 (27%), Positives = 103/211 (48%)
 Frame = +1

Query: 259 IEDAERKIKPWARHKFSNLHVRVEQAREWLYDVQRQVQANPWDQFLGQKEKEALQRYNEL 438
           ++  ++++K +    FSN+  RV+ A+  +   Q+ +     +  L  +E++ + +Y   
Sbjct: 252 LKKLKQELKLFNMAHFSNISDRVKDAKNEMDKAQQALHTAHENPILCMRERDVVHKYAST 311

Query: 439 ASIEAAEILSKQEGEWMREVDKCTAFFFKSLEEKKARSGIWVIQNSQGANVSGHAEVTKA 618
              E +    K   +W+   D+ T++F KS+  +  R+ +  +    G  V GH  V   
Sbjct: 312 VRAEESFFKQKARIQWLSLGDQNTSYFHKSVNGRHNRNKLLSLTREDGEVVEGHEAVKSE 371

Query: 619 VVNYYSEILGTHAADISEDEFFNNLQIKARISPNMKYVLEAEVTSKEVKRALFDMKENSA 798
           V+ Y+  +LG        +E      I  ++S   ++VL   VT KE+K A+F +K N A
Sbjct: 372 VIAYFHRVLGVDQMPRVLNEEVMESAINLKLSSTQQHVLAQVVTRKEIKHAMFSLKNNKA 431

Query: 799 PGLDGFTPLFFTICWSIVGYDFTAAIINAFK 891
           PGLDGF   FF   W IVG D   A+ + F+
Sbjct: 432 PGLDGFNAGFFKRMWHIVGEDVINAVRSLFQ 462


>emb|CAH65761.1| H0215A08.3 [Oryza sativa Indica Group]
          Length = 1186

 Score = 80.1 bits (196), Expect(2) = 1e-17
 Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 4/211 (1%)
 Frame = +1

Query: 256 EIEDAERKIKPWARHKFSNLHVRVEQAREWLYDVQRQVQA---NPWDQFLGQKEKEALQR 426
           ++  A RK++ W+  K  N+ +++E ARE +    +  ++   +  ++FL    K    +
Sbjct: 282 KLRTAARKLRSWSDKKVGNVKLQMEMARELIGRFDKAEESRILSLQERFL---HKNLKLK 338

Query: 427 YNELASIEAAEILSKQEGEWMREVDKCTAFFFKSLEEKKARSGIWVIQNSQGANVSGHAE 606
           Y  LAS+E      +    W++E D  T FF +    +K R+ I  +++++    S   E
Sbjct: 339 YLALASLERTMAWQRSRITWLQEGDANTRFFHQQAAARKRRNFIQQLEHNEAVATSPE-E 397

Query: 607 VTKAVVNYYSEILGT-HAADISEDEFFNNLQIKARISPNMKYVLEAEVTSKEVKRALFDM 783
             +    Y++ +LG+ H    S D  F  LQ +    P     LE   T +EV  A+ D 
Sbjct: 398 KDQLAHEYFTNLLGSAHQRSFSLDMDF--LQQQGASLPQ----LETPFTEEEVWAAIRDT 451

Query: 784 KENSAPGLDGFTPLFFTICWSIVGYDFTAAI 876
             + APG DGFT LF+  CW I+  D   A+
Sbjct: 452 PRDKAPGPDGFTSLFYHTCWQILRQDVMEAL 482



 Score = 36.2 bits (82), Expect(2) = 1e-17
 Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +2

Query: 98  DHSPILLLWN*LASKAWPFRFKSYWVEQKDFQRILQEVWQVKIYS-NPMYILIQKLKMLK 274
           DH P+LL    +  +   FRF+S+W + + F+ +++E W     + +P+  L +KL+   
Sbjct: 228 DHCPLLLSTYPVHPRGGRFRFESFWCKLEGFEEVVRESWSAPCSTVDPVARLDRKLRTAA 287

Query: 275 ERL 283
            +L
Sbjct: 288 RKL 290


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
           [Arabidopsis thaliana]
          Length = 1164

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 60/231 (25%), Positives = 113/231 (48%), Gaps = 1/231 (0%)
 Frame = +1

Query: 199 FTRSLAGQDLFKPHVHPHTEIEDAERKIKPWARHKFSNLHVRVEQAREWLYDVQRQVQAN 378
           F+ S+ G  +++  V    +++  ++ I+ ++R  +S++  R ++A + L   Q  + A+
Sbjct: 167 FSTSVTGSAMYRVSV----KLKALKKVIRDFSRDNYSDIEKRTKEAHDALLLAQSVLLAS 222

Query: 379 PWDQFLGQKEKEALQRYNELASIEAAEILSKQEGEWMREVDKCTAFFFKSLEEKKARSGI 558
           P        E E  +++  LA  EA+    +    W+RE D  +++F K    +++ + I
Sbjct: 223 PCPSNAAI-EAETQRKWRILAEAEASFFYQRSRVNWLREGDMNSSYFHKMASARQSLNHI 281

Query: 559 WVIQNSQGANVSGHAEVTKAVVNYYSEILGTHAA-DISEDEFFNNLQIKARISPNMKYVL 735
             + +  G  + G   +    V Y+   LG+     + E    +NL +  R SP  +  L
Sbjct: 282 HFLSDPVGDRIEGQQNLENHCVEYFQSNLGSEQGLPLFEQADISNL-LSYRCSPAQQVSL 340

Query: 736 EAEVTSKEVKRALFDMKENSAPGLDGFTPLFFTICWSIVGYDFTAAIINAF 888
           +   +S+++K A F +  N A G DGF+P FF  CW I+G + T AI   F
Sbjct: 341 DTPFSSEQIKNAFFSLPRNKASGPDGFSPEFFCACWPIIGGEVTEAIHEFF 391


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 1/205 (0%)
 Frame = +1

Query: 280 IKPWARHKFSNLHVRVEQAREWLYDVQRQVQANPWDQFLGQKEKEALQRYNELASIEAAE 459
           I+ + R  +S L  RV QA + L   Q  + A P   +L   EKEA + + ELA  E   
Sbjct: 291 IRTFNREHYSGLEKRVVQAAQNLKTCQNNLLAAP-SSYLAGLEKEAHRSWAELALAEERF 349

Query: 460 ILSKQEGEWMREVDKCTAFFFKSLEEKKARSGIWVIQNSQGANVSGHAEVTKAVVNYYSE 639
           +  K    W++  D  T FF + +  ++A + I  + +  G  +    E+    V+++ E
Sbjct: 350 LCQKSRVLWLKCGDSNTTFFHRMMTARRAINEIHYLLDQTGRRIENTDELQTHCVDFFKE 409

Query: 640 ILGTHAADISEDEFFN-NLQIKARISPNMKYVLEAEVTSKEVKRALFDMKENSAPGLDGF 816
           + G+ +  IS +     N   + +   N + +LEAEV+  ++K   F +  N +PG DG+
Sbjct: 410 LFGSSSHLISAEGISQINSLTRFKCDENTRQLLEAEVSEADIKSEFFALPSNKSPGPDGY 469

Query: 817 TPLFFTICWSIVGYDFTAAIINAFK 891
           T  FF   WSIVG    AA+   F+
Sbjct: 470 TSEFFKKTWSIVGPSLIAAVQEFFR 494