BLASTX nr result

ID: Coptis25_contig00026008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026008
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15558.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_002278278.1| PREDICTED: golgin candidate 2-like [Vitis vi...   109   2e-22
ref|XP_002532492.1| Golgin-84, putative [Ricinus communis] gi|22...   103   1e-20
ref|XP_003631094.1| Golgin candidate [Medicago truncatula] gi|35...    96   3e-18
gb|ABE80160.2| Prefoldin [Medicago truncatula]                         96   3e-18

>emb|CBI15558.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score =  109 bits (273), Expect = 2e-22
 Identities = 62/96 (64%), Positives = 69/96 (71%)
 Frame = -1

Query: 300 KGVEFEREILEAEYSVICDXXXXXXXXXXXXXXXXXXXXXEMDVPTAVEVELKRRLTQLT 121
           KGVEFE+EILEAEYS I D                     EM+ PT VEVELKRRL QLT
Sbjct: 64  KGVEFEKEILEAEYSFITDKIGWLQDKAKKLEANIEMTRKEMESPTVVEVELKRRLFQLT 123

Query: 120 NHLIQKQSQVEALSAEKATMLFRIETVSRLLEEHKL 13
           +HLIQKQ+QVEALS+EKAT+LFRIE VSRLLEE+KL
Sbjct: 124 DHLIQKQAQVEALSSEKATLLFRIEAVSRLLEENKL 159


>ref|XP_002278278.1| PREDICTED: golgin candidate 2-like [Vitis vinifera]
          Length = 682

 Score =  109 bits (273), Expect = 2e-22
 Identities = 62/96 (64%), Positives = 69/96 (71%)
 Frame = -1

Query: 300 KGVEFEREILEAEYSVICDXXXXXXXXXXXXXXXXXXXXXEMDVPTAVEVELKRRLTQLT 121
           KGVEFE+EILEAEYS I D                     EM+ PT VEVELKRRL QLT
Sbjct: 482 KGVEFEKEILEAEYSFITDKIGWLQDKAKKLEANIEMTRKEMESPTVVEVELKRRLFQLT 541

Query: 120 NHLIQKQSQVEALSAEKATMLFRIETVSRLLEEHKL 13
           +HLIQKQ+QVEALS+EKAT+LFRIE VSRLLEE+KL
Sbjct: 542 DHLIQKQAQVEALSSEKATLLFRIEAVSRLLEENKL 577


>ref|XP_002532492.1| Golgin-84, putative [Ricinus communis] gi|223527791|gb|EEF29891.1|
           Golgin-84, putative [Ricinus communis]
          Length = 691

 Score =  103 bits (257), Expect = 1e-20
 Identities = 56/94 (59%), Positives = 67/94 (71%)
 Frame = -1

Query: 300 KGVEFEREILEAEYSVICDXXXXXXXXXXXXXXXXXXXXXEMDVPTAVEVELKRRLTQLT 121
           KGVEFEREILEAEYS + D                     +++ PT VE+ELKRRL QLT
Sbjct: 494 KGVEFEREILEAEYSFLTDKIAVLEDKAKKLEEDIEMTRKDIEDPTEVEIELKRRLAQLT 553

Query: 120 NHLIQKQSQVEALSAEKATMLFRIETVSRLLEEH 19
           +HLIQKQ+QVEALS+EKAT+LFRIE VSRLL+E+
Sbjct: 554 DHLIQKQAQVEALSSEKATLLFRIEAVSRLLDEN 587


>ref|XP_003631094.1| Golgin candidate [Medicago truncatula] gi|355525116|gb|AET05570.1|
           Golgin candidate [Medicago truncatula]
          Length = 667

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 53/94 (56%), Positives = 67/94 (71%)
 Frame = -1

Query: 300 KGVEFEREILEAEYSVICDXXXXXXXXXXXXXXXXXXXXXEMDVPTAVEVELKRRLTQLT 121
           KGVEFEREILEAE+S I D                     E++ PT VEVELKRRL Q+T
Sbjct: 460 KGVEFEREILEAEHSFINDKVAQLQEKARKLEADIEMTRKEIEEPTEVEVELKRRLHQMT 519

Query: 120 NHLIQKQSQVEALSAEKATMLFRIETVSRLLEEH 19
           +HLIQKQ++VE+LS+EKA+++FRIE VSRLL+E+
Sbjct: 520 DHLIQKQAKVESLSSEKASLIFRIEAVSRLLDEN 553


>gb|ABE80160.2| Prefoldin [Medicago truncatula]
          Length = 268

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 53/94 (56%), Positives = 67/94 (71%)
 Frame = -1

Query: 300 KGVEFEREILEAEYSVICDXXXXXXXXXXXXXXXXXXXXXEMDVPTAVEVELKRRLTQLT 121
           KGVEFEREILEAE+S I D                     E++ PT VEVELKRRL Q+T
Sbjct: 61  KGVEFEREILEAEHSFINDKVAQLQEKARKLEADIEMTRKEIEEPTEVEVELKRRLHQMT 120

Query: 120 NHLIQKQSQVEALSAEKATMLFRIETVSRLLEEH 19
           +HLIQKQ++VE+LS+EKA+++FRIE VSRLL+E+
Sbjct: 121 DHLIQKQAKVESLSSEKASLIFRIEAVSRLLDEN 154


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