BLASTX nr result

ID: Coptis25_contig00025990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025990
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301078.1| predicted protein [Populus trichocarpa] gi|2...   248   6e-64
ref|XP_002514001.1| conserved hypothetical protein [Ricinus comm...   231   7e-59
ref|XP_002522617.1| conserved hypothetical protein [Ricinus comm...   221   4e-56
ref|XP_002323957.1| predicted protein [Populus trichocarpa] gi|2...   219   2e-55
ref|XP_002269775.1| PREDICTED: uncharacterized protein LOC100267...   216   2e-54

>ref|XP_002301078.1| predicted protein [Populus trichocarpa] gi|222842804|gb|EEE80351.1|
           predicted protein [Populus trichocarpa]
          Length = 383

 Score =  248 bits (632), Expect = 6e-64
 Identities = 112/178 (62%), Positives = 142/178 (79%)
 Frame = +1

Query: 10  WKDSLPANSTLMEGLTFVSDTYYDYTNLWHGLTAMAPFVSWYKRNGCESPSRWVLYHWGE 189
           W ++LP ++TLM+GLTFVSDT+YDY NLWHGLT MAPFV W  +N C +P+RWVL+HWGE
Sbjct: 77  WPEALPDSATLMKGLTFVSDTFYDYGNLWHGLTGMAPFVGWSMKNKCLNPTRWVLFHWGE 136

Query: 190 LRTGMGSWHENLMKATFGELKVEGFGKSNGSSCFEKAVVMRHNIGKMGKERRLEVFDMLR 369
           LR+ MGSW ++LM+A FG++K+EGFG  +G  CFEKAVVMRHN G MGKER+L+VFD+LR
Sbjct: 137 LRSKMGSWLQHLMQANFGDVKIEGFG-GDGPYCFEKAVVMRHNEGSMGKERKLQVFDLLR 195

Query: 370 CKARAFCNVSFESSNAENNKKEDTAVRLTLLMRKGARSFKNESLVVKIFSNECARVKG 543
           C AR FC +S E    E N++ +  +RLTLLMR G+RSFKN S V  IF+ ECA+V+G
Sbjct: 196 CNARRFCGISPEGKGQETNERGEPIIRLTLLMRTGSRSFKNASAVTDIFARECAKVEG 253


>ref|XP_002514001.1| conserved hypothetical protein [Ricinus communis]
           gi|223547087|gb|EEF48584.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 479

 Score =  231 bits (588), Expect = 7e-59
 Identities = 105/179 (58%), Positives = 133/179 (74%)
 Frame = +1

Query: 7   AWKDSLPANSTLMEGLTFVSDTYYDYTNLWHGLTAMAPFVSWYKRNGCESPSRWVLYHWG 186
           AW ++LP ++ LM+GLTFVSDTYYDY NLWHGL A+APFV W  +N C  P+RWVL+HWG
Sbjct: 152 AWPEALPHSAKLMDGLTFVSDTYYDYVNLWHGLCAVAPFVGWSIKNECLKPTRWVLFHWG 211

Query: 187 ELRTGMGSWHENLMKATFGELKVEGFGKSNGSSCFEKAVVMRHNIGKMGKERRLEVFDML 366
           ELR+ MG+W ENLM   FGE+KVE   +     CFEKAVVMRHN G MGKE++L+VFD+L
Sbjct: 212 ELRSKMGAWLENLMGTNFGEVKVERLEEGAQPYCFEKAVVMRHNEGGMGKEKKLQVFDLL 271

Query: 367 RCKARAFCNVSFESSNAENNKKEDTAVRLTLLMRKGARSFKNESLVVKIFSNECARVKG 543
           RC AR FC +       E N++ +  +RLTLLMR+G+RSFKN + V+ +F+ ECA V G
Sbjct: 272 RCNARRFCGIDPAGKRKEVNERGEPIIRLTLLMRRGSRSFKNATAVIGVFARECAMVDG 330


>ref|XP_002522617.1| conserved hypothetical protein [Ricinus communis]
           gi|223538093|gb|EEF39704.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 487

 Score =  221 bits (564), Expect = 4e-56
 Identities = 105/182 (57%), Positives = 133/182 (73%), Gaps = 3/182 (1%)
 Frame = +1

Query: 7   AWKDSLPANSTLMEGLTFVSDTYYDYTNLWHGLTAMAPFVSWYKRNGCESPSRWVLYHWG 186
           AW ++LP N+TL++GLTFVS  +YDY N+WHGL+A+ PFV+W+K NG E PSRW+LYHWG
Sbjct: 162 AWPETLPLNATLLKGLTFVSYNHYDYNNIWHGLSAIVPFVAWHKGNGGELPSRWILYHWG 221

Query: 187 ELRTGMGSWHENLMKATFGE-LKVEGFGKSNGSS--CFEKAVVMRHNIGKMGKERRLEVF 357
           ELR  MG W   L +ATFG    +EGFG +N +   CFEKAVVMRHN G M  +RR+E +
Sbjct: 222 ELRFNMGLWLSTLTEATFGSPPNIEGFGWANNNEPICFEKAVVMRHNEGGMSTDRRIETY 281

Query: 358 DMLRCKARAFCNVSFESSNAENNKKEDTAVRLTLLMRKGARSFKNESLVVKIFSNECARV 537
           D +RCKARA+CNVS E  N   ++K    + +TL MR G RSFKNES V++IF  ECA+V
Sbjct: 282 DFMRCKARAYCNVSLEGGNMV-SEKGLPVIGMTLFMRTGPRSFKNESAVIRIFEKECAKV 340

Query: 538 KG 543
            G
Sbjct: 341 DG 342


>ref|XP_002323957.1| predicted protein [Populus trichocarpa] gi|222866959|gb|EEF04090.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  219 bits (558), Expect = 2e-55
 Identities = 106/182 (58%), Positives = 131/182 (71%), Gaps = 3/182 (1%)
 Frame = +1

Query: 7   AWKDSLPANSTLMEGLTFVSDTYYDYTNLWHGLTAMAPFVSWYKRNGCESPSRWVLYHWG 186
           AW ++LP N+TL++GLTFVS  +YDY N+WHGL+AM PFV+W+ RNGCESPSRW+LYHWG
Sbjct: 135 AWPEALPFNATLLKGLTFVSYNHYDYDNIWHGLSAMVPFVAWHIRNGCESPSRWILYHWG 194

Query: 187 ELRTGMGSWHENLMKATFGELK-VEGF-GKSNGSS-CFEKAVVMRHNIGKMGKERRLEVF 357
           ELR  MG W   L  ATFG     E F G ++G   CFEKAVVMRHN G M ++RR E +
Sbjct: 195 ELRFEMGPWLRTLTGATFGGAPYTESFEGVNDGQPLCFEKAVVMRHNEGGMSRDRRTETY 254

Query: 358 DMLRCKARAFCNVSFESSNAENNKKEDTAVRLTLLMRKGARSFKNESLVVKIFSNECARV 537
           D++RCKAR +CNVS E    E NK+    + +TL MR G+RSF NES V+ IF  ECA+V
Sbjct: 255 DLMRCKARMYCNVSLEGRIPEVNKQGLPVIGMTLFMRTGSRSFTNESAVIGIFEKECAKV 314

Query: 538 KG 543
            G
Sbjct: 315 DG 316


>ref|XP_002269775.1| PREDICTED: uncharacterized protein LOC100267753 [Vitis vinifera]
          Length = 491

 Score =  216 bits (550), Expect = 2e-54
 Identities = 104/183 (56%), Positives = 135/183 (73%), Gaps = 4/183 (2%)
 Frame = +1

Query: 7   AWKDSLPANSTLMEGLTFVSDTYYDYTNLWHGLTAMAPFVSWYKRNG-CESPSRWVLYHW 183
           AW+D+LP N+T+++GLTFVS  +Y+Y N+WHGL+AM PFV+W+ R G C  P+RWVLYHW
Sbjct: 169 AWRDALPRNATVLKGLTFVSYNHYNYDNIWHGLSAMMPFVAWHLRQGQCAVPTRWVLYHW 228

Query: 184 GELRTGMGSWHENLMKATF-GELKVEGFGKS--NGSSCFEKAVVMRHNIGKMGKERRLEV 354
           GELR  MG W ++L++ATF G + +E FG S   G +CFE+AVVMRHN G M +ERRLEV
Sbjct: 229 GELRMKMGPWVKSLIQATFGGSVNIEEFGDSGDEGVACFEEAVVMRHNEGGMSRERRLEV 288

Query: 355 FDMLRCKARAFCNVSFESSNAENNKKEDTAVRLTLLMRKGARSFKNESLVVKIFSNECAR 534
           +DM+RCKAR +CNV  E             + LT+LMR GARSF+NES VV+IF  EC +
Sbjct: 289 YDMMRCKARKYCNVRIEGRGL-------AVIGLTMLMRTGARSFRNESAVVRIFQRECRK 341

Query: 535 VKG 543
           V+G
Sbjct: 342 VEG 344


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