BLASTX nr result
ID: Coptis25_contig00025969
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025969 (1050 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera] 152 4e-50 ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ... 124 1e-33 ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 119 3e-33 emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] 117 1e-32 ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm... 98 2e-29 >emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera] Length = 1290 Score = 152 bits (384), Expect(2) = 4e-50 Identities = 98/266 (36%), Positives = 141/266 (53%), Gaps = 13/266 (4%) Frame = +2 Query: 260 QLSLPPQRTFPFQS---ESYIEPSHLRKIAVFKFVMSSSMPDSENDCIVMVICSQFNSLA 430 Q+ LP R P + +S + S + I ++K V+SS+ S DC VM+I S + LA Sbjct: 1033 QILLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSA--PSSPDCAVMIIYSDYGRLA 1090 Query: 431 FARPGDETWTIIDSPPQQAHSDILFFNGRFYAIHAGGILRICEINEPVPKTIDFLPPP-- 604 F +PG +TWT+++S DI++FNG F A++ + IC+I+ KTI F P Sbjct: 1091 FTKPGHQTWTLLESESGPV-DDIIYFNGSFLAVNLSWEVWICDISGSQLKTIRFAAAPAL 1149 Query: 605 ---DDIELSDRFYLVEISGHLHLVARGLDLDQNAPDTGR----YVTDW-FEVYKLDFDAK 760 D+IE + YLVE G +++V R N DT R Y+ W F V KLD K Sbjct: 1150 QDVDEIEYEAK-YLVESGGEIYMVTR------NLYDTARRDIPYMRTWTFSVLKLDMCNK 1202 Query: 761 KWIVLSDFGDYSIFIGTNSSFAISTSEYPGFKANYIYFTDDHEECYEYGGGHNMGFYDFD 940 +W + + S F+G N SF+ S+YP F+ N IYFTDD+ +MG Y+F Sbjct: 1203 RWEEVENLDHCSFFLGNNHSFSTWASDYPEFRKNSIYFTDDYCGFLNIPRNFDMGIYNFQ 1262 Query: 941 NQKFGSFYVGEDIISFFCPPLFFRPS 1018 N + + VG D +S F PL+ RPS Sbjct: 1263 NTQIEHYPVGHDALSMFSAPLWIRPS 1288 Score = 73.2 bits (178), Expect(2) = 4e-50 Identities = 36/77 (46%), Positives = 48/77 (62%) Frame = +3 Query: 30 SYSPWLMLPERDENNSDGEQIHHNNRKFVCLSSGKTFNVYLPECQGSRCFGSPFGWLLTV 209 S SPWLML E++ + G F SGK + + LPE G C+GSP+GWL+T+ Sbjct: 967 SKSPWLMLAEKENSEIRG---------FYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTI 1017 Query: 210 GLDLNIHLLNPLTRAQL 260 G DL++ LLNPLTR Q+ Sbjct: 1018 GTDLDMCLLNPLTRVQI 1034 >ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 398 Score = 124 bits (310), Expect(2) = 1e-33 Identities = 81/251 (32%), Positives = 134/251 (53%), Gaps = 26/251 (10%) Frame = +2 Query: 257 AQLSLPPQRTFP-------------------FQSESYIEPSHLRKIAVFKFVMSSSMPDS 379 A+LSLPP +FP + +R + K V+SSS P Sbjct: 118 AKLSLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSS-PLK 176 Query: 380 ENDCIVMVICSQFNSLAFARPGDETWTIIDSPPQQAHSDILFFNGRFYAIHAGGILRICE 559 +N+ +V+ I +Q + LA+ R GD++W+++++ + D++F NG FYA++ G + IC+ Sbjct: 177 DNNFVVIAILNQTDDLAYCRNGDKSWSLVENA-RSFCEDVIFVNGMFYAVNKAGQIVICD 235 Query: 560 INEPVPKTIDFLPPPDDIELSDRFYLVEISGHLHLVARGLDLDQ--NAPDTGR---YVTD 724 I+ P+ + F+ P D YLV L LV R LDL+ + PD Y T Sbjct: 236 ISSDSPR-VSFMETPRQAG-GDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTI 293 Query: 725 WFEVYKLDFDAKKWIVLSDFGDYSIFIGTNSSFAISTSEYPGFKANYIYFTDDHEECYEY 904 FEV++LD++ +W+ +S GD ++FIG NSS ++S +++ G N IY+TDD+ + Sbjct: 294 RFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANYD 353 Query: 905 G--GGHNMGFY 931 G G H++G + Sbjct: 354 GHFGDHDLGIF 364 Score = 46.6 bits (109), Expect(2) = 1e-33 Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = +3 Query: 39 PWLMLPERDENNSDGEQIHHNNRKFVCLSSGKTFNVYLPECQ-GSRCFGSPFGWLLTVGL 215 PWLMLP+ Q + + R F LS+ K + LPE R GS GWL+ + Sbjct: 52 PWLMLPQSQS------QSNQSRRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDD 105 Query: 216 DLNIHLLNPLTRAQLN 263 I L+NPLTRA+L+ Sbjct: 106 TPTILLINPLTRAKLS 121 >ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera] Length = 389 Score = 119 bits (297), Expect(2) = 3e-33 Identities = 73/211 (34%), Positives = 120/211 (56%), Gaps = 5/211 (2%) Frame = +2 Query: 326 LRKIAVFKFVMSSSMPDSENDCIVMVICSQFNSLAFARPGDETWTIIDSPPQQAHSDILF 505 +R + K ++SSS P + +D I +VI +Q LA R D++WT ++ A D++F Sbjct: 157 MRDSFIKKTILSSS-PANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAE-DVIF 214 Query: 506 FNGRFYAIHAGGILRICEINEPVPKTIDFLPPPDDIELSDRFYLVEISGHLHLVARGLDL 685 G FYA++ G + +C+++ P+ + + P D YLVE L LV R LDL Sbjct: 215 HRGLFYAVNKYGSIAVCDVSGSSPR-VSIIEMPQQFG-GDLQYLVESGEELLLVTRYLDL 272 Query: 686 DQNA-PDTGR--YVTDWFEVYKLDFDAKKWIVLSDFGDYSIFIGTNSSFAISTSEYPGFK 856 + PD Y T F+V +LD A +W V+S GD ++F+G N S ++S+ ++PG K Sbjct: 273 TYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCK 332 Query: 857 ANYIYFTDDH-EECYE-YGGGHNMGFYDFDN 943 N IY+TDD+ E+ Y+ GG ++G ++ ++ Sbjct: 333 GNCIYYTDDYSEDNYDGIGGEQDLGIFNLED 363 Score = 50.4 bits (119), Expect(2) = 3e-33 Identities = 32/76 (42%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = +3 Query: 39 PWLMLPERDENNSDGEQIHHNNRKFVCLSSGKTFNVYLPECQGSRCF-GSPFGWLLTVGL 215 PWLMLP+ Q HH +R F LS K + LPE R GS GWLL + Sbjct: 51 PWLMLPQ--------SQPHHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDE 102 Query: 216 DLNIHLLNPLTRAQLN 263 I LLNPLTR++++ Sbjct: 103 APEIFLLNPLTRSKVH 118 >emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] Length = 389 Score = 117 bits (292), Expect(2) = 1e-32 Identities = 73/211 (34%), Positives = 119/211 (56%), Gaps = 5/211 (2%) Frame = +2 Query: 326 LRKIAVFKFVMSSSMPDSENDCIVMVICSQFNSLAFARPGDETWTIIDSPPQQAHSDILF 505 +R + K ++SSS P + +D I +VI +Q LA R D++WT ++ Q D++F Sbjct: 157 MRDSFIKKTILSSS-PANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDA-QSYSEDVIF 214 Query: 506 FNGRFYAIHAGGILRICEINEPVPKTIDFLPPPDDIELSDRFYLVEISGHLHLVARGLDL 685 G FYA++ G + +C+++ P+ + + P D YLVE L LV R LDL Sbjct: 215 HRGLFYAVNKYGSIAVCDVSGSSPR-VSIIEMPQQFG-GDLQYLVESGEELLLVTRYLDL 272 Query: 686 --DQNAPDTGR-YVTDWFEVYKLDFDAKKWIVLSDFGDYSIFIGTNSSFAISTSEYPGFK 856 D T Y T F+V +LD A +W V+S GD ++F+G N S ++S+ ++PG K Sbjct: 273 TYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCK 332 Query: 857 ANYIYFTDDH-EECYE-YGGGHNMGFYDFDN 943 N IY+TDD+ E+ Y+ GG ++G ++ ++ Sbjct: 333 GNCIYYTDDYSEDNYDGIGGEQDLGIFNLED 363 Score = 50.4 bits (119), Expect(2) = 1e-32 Identities = 32/76 (42%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = +3 Query: 39 PWLMLPERDENNSDGEQIHHNNRKFVCLSSGKTFNVYLPECQGSRCF-GSPFGWLLTVGL 215 PWLMLP+ Q HH +R F LS K + LPE R GS GWLL + Sbjct: 51 PWLMLPQ--------SQPHHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDE 102 Query: 216 DLNIHLLNPLTRAQLN 263 I LLNPLTR++++ Sbjct: 103 APEIFLLNPLTRSKVH 118 >ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis] gi|223551309|gb|EEF52795.1| conserved hypothetical protein [Ricinus communis] Length = 406 Score = 97.8 bits (242), Expect(2) = 2e-29 Identities = 78/255 (30%), Positives = 114/255 (44%), Gaps = 25/255 (9%) Frame = +2 Query: 257 AQLSLPPQRTFP-FQSESYIEPSH-------------LRKIAVFKFVMSSSMPDSENDCI 394 A++ LP TFP F +E E S +R+ + K ++S S + Sbjct: 114 ARIELPSLSTFPYFPTEVVYENSRNINEYFNTKAKLRIRETYIRKAIVSED--PSTGNFA 171 Query: 395 VMVICSQFNS---LAFARPGDETWTIIDSPPQQAH-SDILFFNGRFYAIHAGGILRIC-- 556 VM I NS +AF + GD TW I Q+ H D++F G+FYA+ G + IC Sbjct: 172 VMAIYKTINSTENIAFCKSGDATWFTIQETSQKIHYQDVMFHRGKFYAVDDKGRVSICIT 231 Query: 557 EINEPVPKTIDFLPPPDDIELSDRFYLVEISGHLHLVARGLDLDQNAPDTGRYVTDWFEV 736 +IN P + PP + ++YL + L L R + + Y T F V Sbjct: 232 DINPPSVIQVADPPPVPPLMGYKQWYLASLDEDLILAGRFRKYRGSGYE---YQTHKFMV 288 Query: 737 YKLDFDAKKWIVLSDFGDYSIFIGTNSSFAISTSEYPGFKANYIYFTDDHEECYEYGG-- 910 YKLD + W+ L GD F+G N +IST Y + N IYFTDD + G Sbjct: 289 YKLDASSSNWLELDGLGDMLSFLGWNCFHSISTQNYRNYSGNCIYFTDDK---FIVGSDF 345 Query: 911 ---GHNMGFYDFDNQ 946 GH+ G ++ D++ Sbjct: 346 PWEGHDYGIFNLDDK 360 Score = 58.9 bits (141), Expect(2) = 2e-29 Identities = 32/74 (43%), Positives = 43/74 (58%) Frame = +3 Query: 39 PWLMLPERDENNSDGEQIHHNNRKFVCLSSGKTFNVYLPECQGSRCFGSPFGWLLTVGLD 218 PWL+LP N N+R F L+ GKT+++ LPE RC GS GWL+ V Sbjct: 51 PWLLLPYHKNNP--------NHRGFYNLADGKTYHLELPETIEKRCCGSSHGWLVMVEDT 102 Query: 219 LNIHLLNPLTRAQL 260 +I LLNPLT+A++ Sbjct: 103 PSIFLLNPLTKARI 116