BLASTX nr result

ID: Coptis25_contig00025953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025953
         (1016 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266933.1| PREDICTED: uncharacterized protein LOC100258...   132   1e-28
ref|XP_002305604.1| predicted protein [Populus trichocarpa] gi|2...   125   2e-26
ref|XP_003536549.1| PREDICTED: uncharacterized protein LOC100788...   117   3e-24
ref|XP_004145101.1| PREDICTED: uncharacterized protein LOC101211...   114   5e-23
ref|XP_002518522.1| conserved hypothetical protein [Ricinus comm...   110   4e-22

>ref|XP_002266933.1| PREDICTED: uncharacterized protein LOC100258839 [Vitis vinifera]
           gi|302144074|emb|CBI23179.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  132 bits (332), Expect = 1e-28
 Identities = 65/113 (57%), Positives = 85/113 (75%), Gaps = 2/113 (1%)
 Frame = +2

Query: 425 MGIRIKGICKGFRFISQIFVSKERELEIGYPTEVKHVAHIGWESQC-NTPSWMNDFNTSS 601
           M  ++KGI KGF++ISQIFV KERE+EIGYPT+VKHVAHIGW+    + PSWMN++ ++ 
Sbjct: 1   MATKMKGIYKGFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGSAPSWMNEYKSTH 60

Query: 602 NFSTRSLSNLGDEPRDHYNVPV-STWSSQDFEQSMARLPASDNFKESPPNGLP 757
           +FS+ SL +   EPRD  N+   STWSSQDFEQSM + P S+ FK+ PP  +P
Sbjct: 61  DFSSSSLGSF-IEPRDTNNIVARSTWSSQDFEQSMGQHPVSEMFKDCPPTDVP 112


>ref|XP_002305604.1| predicted protein [Populus trichocarpa] gi|222848568|gb|EEE86115.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  125 bits (314), Expect = 2e-26
 Identities = 61/112 (54%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
 Frame = +2

Query: 425 MGIRIKGICKGFRFISQIFVSKERELEIGYPTEVKHVAHIGWESQC-NTPSWMNDFNTSS 601
           M  +IKGI KGF++ISQIFV KERE+EIGYPT+VKHVAHIGW+    + PSWMN+F T  
Sbjct: 1   MATKIKGIYKGFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSGSAPSWMNEFKTPP 60

Query: 602 NFSTRSLSNLGDEPRDHYNVPVSTWSSQDFEQSMARLPASDNFKESPPNGLP 757
           +FST +++N    PRD  +V +S WSSQDF+ S+      + F + PP+ LP
Sbjct: 61  DFSTTTVAN----PRDSSSVILSPWSSQDFDHSLGHQTMPNVFNDIPPSDLP 108


>ref|XP_003536549.1| PREDICTED: uncharacterized protein LOC100788423 [Glycine max]
          Length = 186

 Score =  117 bits (294), Expect = 3e-24
 Identities = 60/111 (54%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
 Frame = +2

Query: 425 MGIRIKGICKGFRFISQIFVSKERELEIGYPTEVKHVAHIGWESQCNT-PSWMNDFNTSS 601
           M   +KGI K F++I+QIFV KERE+EIGYPT+VKHVAHIGW+    T PSWMNDF T+ 
Sbjct: 1   MATTLKGIYKSFKYITQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGTGPSWMNDFKTAP 60

Query: 602 NFSTRSLSNLGDEPRDHYNVPVSTWSSQDFEQSMARLPASDNFKESPPNGL 754
           +FST SL NLG+    +     ++WSSQDFE S    P S+ +K  P  G+
Sbjct: 61  DFST-SLGNLGELSDPNAMAVTTSWSSQDFEVSTGSQPTSNIYKGIPSAGV 110


>ref|XP_004145101.1| PREDICTED: uncharacterized protein LOC101211354 [Cucumis sativus]
           gi|449472647|ref|XP_004153657.1| PREDICTED:
           uncharacterized protein LOC101222050 [Cucumis sativus]
           gi|449526766|ref|XP_004170384.1| PREDICTED:
           uncharacterized LOC101222050 [Cucumis sativus]
          Length = 159

 Score =  114 bits (284), Expect = 5e-23
 Identities = 61/116 (52%), Positives = 78/116 (67%), Gaps = 5/116 (4%)
 Frame = +2

Query: 425 MGIRIKGICKGFRFISQIFVSKERELEIGYPTEVKHVAHIGWESQCNT-PSWMNDFNTS- 598
           M  ++KGI K F++ISQIFV KERE+EIGYPT+VKHVAHIGW+    T PSWMN+F T+ 
Sbjct: 1   MSNKLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGTAPSWMNEFKTAP 60

Query: 599 SNFSTRSLSNLGDEPRDHYNVPV---STWSSQDFEQSMARLPASDNFKESPPNGLP 757
            +FS  S  ++ D  RD  +  V   +TWSS DF+Q+M R   SD F E P   +P
Sbjct: 61  EHFSAASFGDISDR-RDSSSTAVTAPTTWSSLDFDQAMLRQQTSDFFGELPRTEIP 115


>ref|XP_002518522.1| conserved hypothetical protein [Ricinus communis]
           gi|223542367|gb|EEF43909.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 161

 Score =  110 bits (276), Expect = 4e-22
 Identities = 61/119 (51%), Positives = 75/119 (63%), Gaps = 8/119 (6%)
 Frame = +2

Query: 425 MGIRIKGICKG-FRFISQIFVSKERELEIGYPTEVKHVAHIGWESQC-NTPSWMNDFNTS 598
           M  +IKGI KG F+FISQIFV KERE+EIGYPT+VKHVAHIGW+    + PSWMNDF T 
Sbjct: 1   MATKIKGIYKGSFKFISQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGSAPSWMNDFKTP 60

Query: 599 SNFSTRSLSNLGDEPRDHYNVPVSTWSSQDFEQSMARLPASDNF------KESPPNGLP 757
            +FS+ +L+N  D          S WSSQDF+QS+   P S            PP+ +P
Sbjct: 61  PDFSSTTLANTRDSDS---IANFSPWSSQDFDQSIGSQPMSTKSFSNIVPSSDPPSSIP 116


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