BLASTX nr result

ID: Coptis25_contig00025945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025945
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515572.1| syntaxin, putative [Ricinus communis] gi|223...   172   6e-41
ref|XP_002284775.1| PREDICTED: syntaxin-32 [Vitis vinifera] gi|2...   167   1e-39
ref|XP_003526441.1| PREDICTED: syntaxin-32-like [Glycine max]         166   5e-39
ref|XP_003603483.1| Syntaxin [Medicago truncatula] gi|355492531|...   166   5e-39
ref|XP_002331144.1| predicted protein [Populus trichocarpa] gi|2...   166   5e-39

>ref|XP_002515572.1| syntaxin, putative [Ricinus communis] gi|223545516|gb|EEF47021.1|
           syntaxin, putative [Ricinus communis]
          Length = 346

 Score =  172 bits (435), Expect = 6e-41
 Identities = 95/132 (71%), Positives = 106/132 (80%), Gaps = 1/132 (0%)
 Frame = +2

Query: 257 VKSGQSSYRDRTQEFINVTERLKKSVSSSGVQQNVATSSNSG-SKFDAQRSAVSIQSEFN 433
           V  G+SSYRDRTQEF++V ERLKKS SS+      +TSS+S  SK DA RSAV+IQSEFN
Sbjct: 4   VAPGKSSYRDRTQEFLSVVERLKKSFSSANNAAASSTSSSSSISKPDATRSAVAIQSEFN 63

Query: 434 KRASKIGYGIHGTSQXXXXXXXXXXRTSVFDDPTVEIQELTTVIKQDITALNSAVVDLQL 613
           KRASKIG+GIH TSQ          R+SVFDDPT+EIQELT VIKQDITALN+AVVDLQL
Sbjct: 64  KRASKIGFGIHQTSQKLSKLAKLAKRSSVFDDPTMEIQELTAVIKQDITALNAAVVDLQL 123

Query: 614 LCNSQNESGNIS 649
           LCNSQNESGNIS
Sbjct: 124 LCNSQNESGNIS 135


>ref|XP_002284775.1| PREDICTED: syntaxin-32 [Vitis vinifera]
           gi|297738869|emb|CBI28114.3| unnamed protein product
           [Vitis vinifera]
          Length = 338

 Score =  167 bits (424), Expect = 1e-39
 Identities = 92/133 (69%), Positives = 103/133 (77%)
 Frame = +2

Query: 251 MYVKSGQSSYRDRTQEFINVTERLKKSVSSSGVQQNVATSSNSGSKFDAQRSAVSIQSEF 430
           M +KS QSSYRDRTQEF+NV ERLKKS SS+    N  TSS  G+K D  RS+++IQ EF
Sbjct: 1   MSMKSAQSSYRDRTQEFLNVAERLKKSFSSAA--PNAVTSS--GAKPDGTRSSLAIQKEF 56

Query: 431 NKRASKIGYGIHGTSQXXXXXXXXXXRTSVFDDPTVEIQELTTVIKQDITALNSAVVDLQ 610
             RAS+IGYGIH TSQ          RTSVFDDPT+EIQELT V+KQDITALN+AVVDLQ
Sbjct: 57  KDRASRIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTAVVKQDITALNAAVVDLQ 116

Query: 611 LLCNSQNESGNIS 649
           LLCNSQNESGNIS
Sbjct: 117 LLCNSQNESGNIS 129


>ref|XP_003526441.1| PREDICTED: syntaxin-32-like [Glycine max]
          Length = 339

 Score =  166 bits (419), Expect = 5e-39
 Identities = 89/133 (66%), Positives = 103/133 (77%)
 Frame = +2

Query: 251 MYVKSGQSSYRDRTQEFINVTERLKKSVSSSGVQQNVATSSNSGSKFDAQRSAVSIQSEF 430
           M+ KS QSS+RDRTQEF ++TERLKKS    G   N  +SS S ++ + QRSA++ QSEF
Sbjct: 1   MHAKSAQSSFRDRTQEFHSITERLKKS----GSGPNGPSSSTSSTRSEEQRSAIANQSEF 56

Query: 431 NKRASKIGYGIHGTSQXXXXXXXXXXRTSVFDDPTVEIQELTTVIKQDITALNSAVVDLQ 610
           N+RASKIGYGIH TSQ          RTSVFDDPT+EIQELT VIKQDITALNSAVVDLQ
Sbjct: 57  NRRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTGVIKQDITALNSAVVDLQ 116

Query: 611 LLCNSQNESGNIS 649
            LCNS+NESGN+S
Sbjct: 117 FLCNSRNESGNVS 129


>ref|XP_003603483.1| Syntaxin [Medicago truncatula] gi|355492531|gb|AES73734.1| Syntaxin
           [Medicago truncatula]
          Length = 336

 Score =  166 bits (419), Expect = 5e-39
 Identities = 91/138 (65%), Positives = 102/138 (73%), Gaps = 5/138 (3%)
 Frame = +2

Query: 251 MYVKSGQSSYRDRTQEFINVTERLKKSVSSSGVQQNVATSSNSGS-----KFDAQRSAVS 415
           M  KS QSS+RDRT EF+ V ERLKKSVSS        TS+ S S     + D  RSAV+
Sbjct: 1   MQFKSSQSSFRDRTHEFLTVAERLKKSVSSGSAPNGATTSAPSSSFPSSSRSDDPRSAVA 60

Query: 416 IQSEFNKRASKIGYGIHGTSQXXXXXXXXXXRTSVFDDPTVEIQELTTVIKQDITALNSA 595
           IQSEFN+RASKIGYGIH TSQ          RTSVFDDPT+EIQELT+VIKQDITALNSA
Sbjct: 61  IQSEFNRRASKIGYGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTSVIKQDITALNSA 120

Query: 596 VVDLQLLCNSQNESGNIS 649
           VVDLQL+ NS+NESGN+S
Sbjct: 121 VVDLQLISNSRNESGNVS 138


>ref|XP_002331144.1| predicted protein [Populus trichocarpa] gi|222873227|gb|EEF10358.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score =  166 bits (419), Expect = 5e-39
 Identities = 92/128 (71%), Positives = 104/128 (81%), Gaps = 1/128 (0%)
 Frame = +2

Query: 269 QSSYRDRTQEFINVTERLKKSVSSSGVQQNVATSSN-SGSKFDAQRSAVSIQSEFNKRAS 445
           ++SYRDRTQEF++V ERLKKS SS+    N A+SS  S +K DA+RSAV+IQSEF+KRAS
Sbjct: 6   KTSYRDRTQEFLSVAERLKKSFSSAS---NAASSSTGSSTKPDAKRSAVAIQSEFSKRAS 62

Query: 446 KIGYGIHGTSQXXXXXXXXXXRTSVFDDPTVEIQELTTVIKQDITALNSAVVDLQLLCNS 625
            IGYGIH TSQ          RTSVFDDPT+EIQELT VIKQDITALN+AVVDLQLLCNS
Sbjct: 63  MIGYGIHQTSQKLAKLAKLAKRTSVFDDPTLEIQELTAVIKQDITALNAAVVDLQLLCNS 122

Query: 626 QNESGNIS 649
           QNESGNIS
Sbjct: 123 QNESGNIS 130


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