BLASTX nr result

ID: Coptis25_contig00025932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025932
         (1041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40584.3| unnamed protein product [Vitis vinifera]              504   e-140
ref|XP_002264541.1| PREDICTED: bifunctional fucokinase/fucose py...   501   e-139
ref|XP_004134296.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional...   496   e-138
ref|XP_002892082.1| hypothetical protein ARALYDRAFT_470155 [Arab...   487   e-135
ref|XP_003553794.1| PREDICTED: bifunctional fucokinase/fucose py...   486   e-135

>emb|CBI40584.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  504 bits (1298), Expect = e-140
 Identities = 251/355 (70%), Positives = 295/355 (83%), Gaps = 12/355 (3%)
 Frame = -3

Query: 1030 KIDVSKTLRKSWYHLRLSVRDPNRVPTWDAIILTAASPEQAQLYEWQLNRAKRMGRIATS 851
            K+D++  LRKSWY LRLSVR P+RVPTWDAI+LTAASPEQA+LYEWQL RAKR+GRIA+S
Sbjct: 9    KVDLTGILRKSWYRLRLSVRHPSRVPTWDAIVLTAASPEQAELYEWQLKRAKRLGRIASS 68

Query: 850  TITLAVPDPHGARIGSGAATLNALLALSRFFQ--NQQVENY----------RXXXXXXXX 707
            T+TL VPDP G RIGSG ATLNA+ AL+R  +    QVEN                    
Sbjct: 69   TVTLVVPDPDGNRIGSGGATLNAIYALARHLEALGPQVENMDTGSSESSVPHERSNSEVS 128

Query: 706  XXSVITFLTNKHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAI 527
               +++F+  +HILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAI
Sbjct: 129  FSPMVSFMAKRHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAI 188

Query: 526  SSCARQAFKDKGGVFIMTGDVLPCFDASTMVLPEDSSCIITVPITLDVASNHGVIVASNT 347
            S CARQAFK++GG+FIMTGDVLPCFDASTMVLPED+SCIITVP+TLD+ASNHGVIVAS T
Sbjct: 189  SCCARQAFKNEGGIFIMTGDVLPCFDASTMVLPEDTSCIITVPLTLDIASNHGVIVASKT 248

Query: 346  GTVDKTYALSLVQNLLQKPSVKELLDKQAILHDGRTLLDTGIIAVKGKAWVDLLILANSS 167
            G ++KT  +SLV+NLLQKP+++EL+  QAIL DGRTLLDTGIIAV+GKAWV+L+ LA SS
Sbjct: 249  GILNKTSYVSLVENLLQKPTMEELVKNQAILDDGRTLLDTGIIAVRGKAWVELVRLACSS 308

Query: 166  ETMISELIEHKEEISLYEDLVAAWVPARHEWLKLRPFGKELIKGLGNHMMFSYCA 2
            + MI++L++ K+E+SLYEDLVAAWV ARHEWL+LRP G+ELI  LG   M+SYCA
Sbjct: 309  QPMIADLLKSKKEMSLYEDLVAAWVLARHEWLRLRPLGEELINRLGKQKMYSYCA 363


>ref|XP_002264541.1| PREDICTED: bifunctional fucokinase/fucose pyrophosphorylase-like
            [Vitis vinifera]
          Length = 1079

 Score =  501 bits (1290), Expect = e-139
 Identities = 249/353 (70%), Positives = 294/353 (83%), Gaps = 10/353 (2%)
 Frame = -3

Query: 1030 KIDVSKTLRKSWYHLRLSVRDPNRVPTWDAIILTAASPEQAQLYEWQLNRAKRMGRIATS 851
            K+D++  LRKSWY LRLSVR P+RVPTWDAI+LTAASPEQA+LYEWQL RAKR+GRIA+S
Sbjct: 9    KVDLTGILRKSWYRLRLSVRHPSRVPTWDAIVLTAASPEQAELYEWQLKRAKRLGRIASS 68

Query: 850  TITLAVPDPHGARIGSGAATLNALLALSRFFQNQQVENY----------RXXXXXXXXXX 701
            T+TL VPDP G RIGSG ATLNA+ AL+R  +   +EN                      
Sbjct: 69   TVTLVVPDPDGNRIGSGGATLNAIYALARHLE--ALENMDTGSSESSVPHERSNSEVSFS 126

Query: 700  SVITFLTNKHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISS 521
             +++F+  +HILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAIS 
Sbjct: 127  PMVSFMAKRHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISC 186

Query: 520  CARQAFKDKGGVFIMTGDVLPCFDASTMVLPEDSSCIITVPITLDVASNHGVIVASNTGT 341
            CARQAFK++GG+FIMTGDVLPCFDASTMVLPED+SCIITVP+TLD+ASNHGVIVAS TG 
Sbjct: 187  CARQAFKNEGGIFIMTGDVLPCFDASTMVLPEDTSCIITVPLTLDIASNHGVIVASKTGI 246

Query: 340  VDKTYALSLVQNLLQKPSVKELLDKQAILHDGRTLLDTGIIAVKGKAWVDLLILANSSET 161
            ++KT  +SLV+NLLQKP+++EL+  QAIL DGRTLLDTGIIAV+GKAWV+L+ LA SS+ 
Sbjct: 247  LNKTSYVSLVENLLQKPTMEELVKNQAILDDGRTLLDTGIIAVRGKAWVELVRLACSSQP 306

Query: 160  MISELIEHKEEISLYEDLVAAWVPARHEWLKLRPFGKELIKGLGNHMMFSYCA 2
            MI++L++ K+E+SLYEDLVAAWV ARHEWL+LRP G+ELI  LG   M+SYCA
Sbjct: 307  MIADLLKSKKEMSLYEDLVAAWVLARHEWLRLRPLGEELINRLGKQKMYSYCA 359


>ref|XP_004134296.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional fucokinase/fucose
            pyrophosphorylase-like [Cucumis sativus]
            gi|449478213|ref|XP_004155252.1| PREDICTED: LOW QUALITY
            PROTEIN: bifunctional fucokinase/fucose
            pyrophosphorylase-like [Cucumis sativus]
          Length = 1065

 Score =  496 bits (1277), Expect = e-138
 Identities = 248/352 (70%), Positives = 286/352 (81%), Gaps = 8/352 (2%)
 Frame = -3

Query: 1033 EKIDVSKTLRKSWYHLRLSVRDPNRVPTWDAIILTAASPEQAQLYEWQLNRAKRMGRIAT 854
            +K D+   LRKSWYHLRLSVR P+RVPTWDAI+LTAASPEQAQLYEWQLNRAKR+GRIA 
Sbjct: 11   KKADLHSILRKSWYHLRLSVRHPSRVPTWDAIVLTAASPEQAQLYEWQLNRAKRIGRIAH 70

Query: 853  STITLAVPDPHGARIGSGAATLNALLALSRFFQNQQVENY--------RXXXXXXXXXXS 698
            STITLAVPDP G RIGSGAATLNA+ AL++ + N  + +         R           
Sbjct: 71   STITLAVPDPDGQRIGSGAATLNAIYALAKHYHNLGLVHSTEVSFISARSKPRFXASALL 130

Query: 697  VITFLTNKHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSC 518
             + F + KHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAI+SC
Sbjct: 131  WLCFTSKKHILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAIASC 190

Query: 517  ARQAFKDKGGVFIMTGDVLPCFDASTMVLPEDSSCIITVPITLDVASNHGVIVASNTGTV 338
            ARQAFK++GG+  MTGDVLPCFDAS ++LPE+ SCIITVPITLD+ASNHGVIVAS   T 
Sbjct: 191  ARQAFKNEGGILTMTGDVLPCFDASALILPEEDSCIITVPITLDIASNHGVIVASKNETA 250

Query: 337  DKTYALSLVQNLLQKPSVKELLDKQAILHDGRTLLDTGIIAVKGKAWVDLLILANSSETM 158
             + Y LSLV NLLQKPSV+EL    A+L DGRTLLDTGIIAV+GK W +L++LA S + M
Sbjct: 251  GRGYTLSLVDNLLQKPSVEELTKNDAVLSDGRTLLDTGIIAVRGKGWAELVLLACSCQPM 310

Query: 157  ISELIEHKEEISLYEDLVAAWVPARHEWLKLRPFGKELIKGLGNHMMFSYCA 2
            IS+L++  +EISLYEDLVAAWVPA+HEWL+ RPFG+E+I+ LG   MFSYCA
Sbjct: 311  ISDLLKCGKEISLYEDLVAAWVPAKHEWLQPRPFGEEVIRRLGRQKMFSYCA 362


>ref|XP_002892082.1| hypothetical protein ARALYDRAFT_470155 [Arabidopsis lyrata subsp.
            lyrata] gi|297337924|gb|EFH68341.1| hypothetical protein
            ARALYDRAFT_470155 [Arabidopsis lyrata subsp. lyrata]
          Length = 1055

 Score =  487 bits (1253), Expect = e-135
 Identities = 237/343 (69%), Positives = 283/343 (82%)
 Frame = -3

Query: 1033 EKIDVSKTLRKSWYHLRLSVRDPNRVPTWDAIILTAASPEQAQLYEWQLNRAKRMGRIAT 854
            +K D++  LRKSWYHLRLSVR P RVPTWDAI+LTAASPEQA+LYEWQL RAKRMGRIA+
Sbjct: 6    KKADLATVLRKSWYHLRLSVRHPTRVPTWDAIVLTAASPEQAELYEWQLRRAKRMGRIAS 65

Query: 853  STITLAVPDPHGARIGSGAATLNALLALSRFFQNQQVENYRXXXXXXXXXXSVITFLTNK 674
            ST+TLAVPDP G RIGSGAATLNA+ AL+R ++    +              V  FL+ K
Sbjct: 66   STVTLAVPDPDGKRIGSGAATLNAIYALARHYEKLGFDPGPEVEVANGTCKWV-RFLSAK 124

Query: 673  HILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQAFKDK 494
            H+L+LHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAI+SCARQAF+D+
Sbjct: 125  HVLMLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAIASCARQAFRDQ 184

Query: 493  GGVFIMTGDVLPCFDASTMVLPEDSSCIITVPITLDVASNHGVIVASNTGTVDKTYALSL 314
            GG+FIMTGDVLPCFDA  M LPED++ I+TVPITLD+ASNHGVIV S + ++ ++Y +SL
Sbjct: 185  GGLFIMTGDVLPCFDAFRMTLPEDAASIVTVPITLDIASNHGVIVTSKSESLAESYTVSL 244

Query: 313  VQNLLQKPSVKELLDKQAILHDGRTLLDTGIIAVKGKAWVDLLILANSSETMISELIEHK 134
            V +LLQKP+V+EL+ K AILHDGRTLLDTGII+ KG+AW+DL+ L  S + MI ELI  K
Sbjct: 245  VNDLLQKPTVEELVKKDAILHDGRTLLDTGIISAKGRAWLDLVALGCSCQPMILELISSK 304

Query: 133  EEISLYEDLVAAWVPARHEWLKLRPFGKELIKGLGNHMMFSYC 5
            +E+SLYEDLVAAWVP+RH+WL+ RP G+ L+  LG   M+SYC
Sbjct: 305  KEMSLYEDLVAAWVPSRHDWLRARPLGELLVNSLGRQKMYSYC 347


>ref|XP_003553794.1| PREDICTED: bifunctional fucokinase/fucose pyrophosphorylase-like
            [Glycine max]
          Length = 1049

 Score =  486 bits (1251), Expect = e-135
 Identities = 243/344 (70%), Positives = 279/344 (81%)
 Frame = -3

Query: 1033 EKIDVSKTLRKSWYHLRLSVRDPNRVPTWDAIILTAASPEQAQLYEWQLNRAKRMGRIAT 854
            +K D++  LRKSWYHLRLSVRDP RVPTWDAI+LTAASPEQAQLY WQL RAKRMGRI+ 
Sbjct: 12   QKEDLASLLRKSWYHLRLSVRDPCRVPTWDAIVLTAASPEQAQLYNWQLERAKRMGRISA 71

Query: 853  STITLAVPDPHGARIGSGAATLNALLALSRFFQNQQVENYRXXXXXXXXXXSVITFLTNK 674
            ST+TLAVPDP G RIGSGAATLNA+ AL+R                       +  L  K
Sbjct: 72   STVTLAVPDPLGQRIGSGAATLNAIHALARCINTN------------------VFLLAKK 113

Query: 673  HILLLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQAFKDK 494
            HILLLHAGGDSKRVPWANPMGKVFLPLPYLA+DDPDGPVPLLFDHILAI+SCARQAF ++
Sbjct: 114  HILLLHAGGDSKRVPWANPMGKVFLPLPYLASDDPDGPVPLLFDHILAIASCARQAFGNQ 173

Query: 493  GGVFIMTGDVLPCFDASTMVLPEDSSCIITVPITLDVASNHGVIVASNTGTVDKTYALSL 314
            GG+  MTGDVLPCFDAS M LP D+SCIITVPITLDVA+NHGVIVA+ T    ++YA+SL
Sbjct: 174  GGMLTMTGDVLPCFDASLMTLPVDTSCIITVPITLDVAANHGVIVAAETEHSTQSYAVSL 233

Query: 313  VQNLLQKPSVKELLDKQAILHDGRTLLDTGIIAVKGKAWVDLLILANSSETMISELIEHK 134
            V NLLQKPSV EL+  +A+L DGRTLLDTGIIAV+GKAW++L+ LA S + MISEL++ K
Sbjct: 234  VDNLLQKPSVDELVKSKAVLADGRTLLDTGIIAVRGKAWLELVTLACSCQQMISELLQSK 293

Query: 133  EEISLYEDLVAAWVPARHEWLKLRPFGKELIKGLGNHMMFSYCA 2
            +E+SLYEDLVAAWVPA+HEWL+ RP G+EL+  LG   MFSYCA
Sbjct: 294  KEMSLYEDLVAAWVPAKHEWLRKRPLGEELVNKLGKRKMFSYCA 337


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