BLASTX nr result
ID: Coptis25_contig00025929
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025929 (551 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 139 3e-31 emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera] 134 7e-30 gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri] 134 1e-29 emb|CAN77256.1| hypothetical protein VITISV_008352 [Vitis vinifera] 132 4e-29 emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera] 126 3e-27 >gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol polyprotein [Arabidopsis thaliana] Length = 1499 Score = 139 bits (350), Expect = 3e-31 Identities = 79/184 (42%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Frame = +3 Query: 3 VYSRPPLSIFAYLPGSTVVHVVYVALWDCDRTLHLLKAHLQYAQAQMKQYADTKRSERSF 182 VY + P YLPG + V VV +L + + L LK HL AQ +MKQ+AD R+ER F Sbjct: 1303 VYGQVPPVHLPYLPGESKVAVVARSLQEREDMLLFLKFHLMRAQHRMKQFADQHRTEREF 1362 Query: 183 EVDDRVYLRLQPYRQSTAASQTYSKLSPHYYGPFQVTEKIGSVAYKLDLPIGCRIHPVFN 362 E+ D VY++LQPYRQ + + KLSP Y+GP+++ ++ G VAYKL LP ++HPVF+ Sbjct: 1363 EIGDYVYVKLQPYRQQSVVMRANQKLSPKYFGPYKIIDRCGEVAYKLALPSYSQVHPVFH 1422 Query: 363 VSALKKKLCNTVTPDPHLPT-RADTFEWVLG*LLE*GIFKNNNQAVTCWLIQWNDHSVDE 539 VS L K L V+ HLP+ D FE V ++E + +AVT L++W++ ++E Sbjct: 1423 VSQL-KVLVGNVSTTVHLPSVMQDVFEKVPEKVVERKMVNRQGKAVTKVLVKWSNEPLEE 1481 Query: 540 AT*E 551 AT E Sbjct: 1482 ATWE 1485 >emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera] Length = 1469 Score = 134 bits (338), Expect = 7e-30 Identities = 79/188 (42%), Positives = 110/188 (58%), Gaps = 7/188 (3%) Frame = +3 Query: 3 VYSRPPLSIFAYLPGSTVVHVVYVALWDCDRTLHLLKAHLQYAQAQMKQYADTKRSERSF 182 VY PP + Y PG+T + V L D + +L+ +LQ AQ +MK++AD K + RSF Sbjct: 1268 VYGYPPPKLIPYTPGTTQLQEVENTLKTRDEIIRILRTNLQLAQDRMKKFADIKXTARSF 1327 Query: 183 EVDDRVYLRLQPYRQSTAASQTYSKLSPHYYGPFQVTEKIGSVAYKLDLPIGCRIHPVFN 362 + D VYLRLQPY+Q + + KLSP +YGP++V EKIG+VAY+L+LP +IHPVF+ Sbjct: 1328 NIGDLVYLRLQPYKQQSVVQRRNLKLSPRFYGPYRVLEKIGTVAYRLELPPEAKIHPVFH 1387 Query: 363 VSALKKKLCN------TVTP-DPHLPTRADTFEWVLG*LLE*GIFKNNNQAVTCWLIQWN 521 VS LK+KL T+ P D R + E +L + K N AVT L++W Sbjct: 1388 VSCLKEKLGERHQLVVTLPPXDKDGVIRXEPEE-----ILHRRLKKKKNHAVTEVLVKWK 1442 Query: 522 DHSVDEAT 545 DEA+ Sbjct: 1443 GLGEDEAS 1450 >gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri] Length = 1557 Score = 134 bits (336), Expect = 1e-29 Identities = 85/193 (44%), Positives = 112/193 (58%), Gaps = 10/193 (5%) Frame = +3 Query: 3 VYSRPPLSIFAYLPGSTVVHVVYVALWDCDRTLHLLKAHLQYAQAQMKQYADTKRSERSF 182 VY +PP YLPG + VV +L + + +LK HL AQ +MKQYAD+ RS+R F Sbjct: 1359 VYGQPPPVHLPYLPGESSSVVVDRSLQKREELIAMLKFHLLRAQNRMKQYADSHRSQREF 1418 Query: 183 EVDDRVYLRLQPYRQSTAASQ-TYSKLSPHYYGPFQVTEKIGSVAYKLDLPIGCRIHPVF 359 +V D VYL+LQPYRQ + ++ KLSP +YGPF+VT+K+G+VAYKL+LP G IH VF Sbjct: 1419 QVGDFVYLKLQPYRQQSLKTKGVPHKLSPRFYGPFRVTDKVGTVAYKLELPQGTAIHNVF 1478 Query: 360 NVSALKKKLCNTVTPDPHLPTRADTFEWVL---------G*LLE*GIFKNNNQAVTCWLI 512 +VS L KLC P+ P+ A L +LE + NQAVT L+ Sbjct: 1479 HVSQL--KLC------PNPPSEAPVMPQYLTDVGNAKEPEAILEKKMVNRQNQAVTKVLV 1530 Query: 513 QWNDHSVDEAT*E 551 QW +AT E Sbjct: 1531 QWKGEPPSKATWE 1543 >emb|CAN77256.1| hypothetical protein VITISV_008352 [Vitis vinifera] Length = 1365 Score = 132 bits (332), Expect = 4e-29 Identities = 80/183 (43%), Positives = 108/183 (59%) Frame = +3 Query: 3 VYSRPPLSIFAYLPGSTVVHVVYVALWDCDRTLHLLKAHLQYAQAQMKQYADTKRSERSF 182 VY R P ++ +Y+PG+ V VV L D+ + L+ LQ AQA+MK D R ER F Sbjct: 1169 VYGREPPNLLSYVPGTLKVEVVDNMLQARDKVVKDLRCQLQQAQARMKTAYDQGRVEREF 1228 Query: 183 EVDDRVYLRLQPYRQSTAASQTYSKLSPHYYGPFQVTEKIGSVAYKLDLPIGCRIHPVFN 362 V D +YLRLQPYRQ+ A + KLSP +YGP+ V E+IG VAY+LDLP G +IHPVF+ Sbjct: 1229 VVGDWIYLRLQPYRQNLLALRRSHKLSPRFYGPYLVLERIGLVAYRLDLPPGSKIHPVFH 1288 Query: 363 VSALKKKLCNTVTPDPHLPTRADTFEWVLG*LLE*GIFKNNNQAVTCWLIQWNDHSVDEA 542 VS LKK+L T D +P ++T + + + +NN+ LIQW +A Sbjct: 1289 VSILKKQLGTTDKIDSPIPLVSETSTHLQPQPIA-VLNSHNNRRKRELLIQWQGLPTTDA 1347 Query: 543 T*E 551 T E Sbjct: 1348 TWE 1350 >emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera] Length = 1259 Score = 126 bits (316), Expect = 3e-27 Identities = 70/139 (50%), Positives = 86/139 (61%) Frame = +3 Query: 3 VYSRPPLSIFAYLPGSTVVHVVYVALWDCDRTLHLLKAHLQYAQAQMKQYADTKRSERSF 182 +Y PP +I +Y GS + + + D L LKAHL A +MKQ AD KR E +F Sbjct: 1103 LYGXPPPAIPSYEIGSCPIEELDDQMTARDELLQELKAHLHAANNRMKQAADKKRREVNF 1162 Query: 183 EVDDRVYLRLQPYRQSTAASQTYSKLSPHYYGPFQVTEKIGSVAYKLDLPIGCRIHPVFN 362 EV D VYLRLQPYRQ + +T KLS YYGP+Q+ E+IG VAYKL L G RIHPVF+ Sbjct: 1163 EVGDWVYLRLQPYRQQSVFRRTSHKLSNRYYGPYQIEERIGPVAYKLKLSPGSRIHPVFH 1222 Query: 363 VSALKKKLCNTVTPDPHLP 419 VS LKKK+ + LP Sbjct: 1223 VSLLKKKIGEVAIANDELP 1241