BLASTX nr result

ID: Coptis25_contig00025924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025924
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252...    69   3e-10
emb|CAN78633.1| hypothetical protein VITISV_037971 [Vitis vinifera]    69   5e-10
ref|XP_002269678.2| PREDICTED: uncharacterized protein LOC100245...    68   9e-10
emb|CAN68941.1| hypothetical protein VITISV_028996 [Vitis vinifera]    68   9e-10
ref|XP_002269635.2| PREDICTED: uncharacterized protein LOC100251...    67   1e-09

>ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252260 [Vitis vinifera]
          Length = 365

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/63 (50%), Positives = 44/63 (69%)
 Frame = -1

Query: 240 NESKTAKPDSVISLFKSYGFTDSHISKVIAYHPQLLLASPEKRLKPKLEYFKSIGISDPI 61
           N   T +PDSV+ LFKSYGFT +HI+ +++  P LLLA+P K L PKL++  + G+S   
Sbjct: 52  NIKTTTRPDSVVQLFKSYGFTPTHIATIVSKLPSLLLANPVKTLAPKLQFLSNNGVSGSS 111

Query: 60  LVN 52
           LVN
Sbjct: 112 LVN 114


>emb|CAN78633.1| hypothetical protein VITISV_037971 [Vitis vinifera]
          Length = 683

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 29/50 (58%), Positives = 42/50 (84%)
 Frame = -1

Query: 219 PDSVISLFKSYGFTDSHISKVIAYHPQLLLASPEKRLKPKLEYFKSIGIS 70
           PDSV++L +++G TD+HISK++A HP LLLA+PEK L PKL++  S+G+S
Sbjct: 97  PDSVLALLRNHGCTDTHISKIVAKHPLLLLANPEKTLSPKLQFLGSVGLS 146


>ref|XP_002269678.2| PREDICTED: uncharacterized protein LOC100245941 [Vitis vinifera]
          Length = 352

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/63 (52%), Positives = 48/63 (76%), Gaps = 3/63 (4%)
 Frame = -1

Query: 222 KPDSVISLFKSYGFTDSHISKVIAYHPQLLLASPEKRLKPKLEYFKSIGISDPIL---VN 52
           + DSV++L ++YG T++HISK+++ +P LL A+PEK L PKLE+F+S+G S P L   V 
Sbjct: 60  RADSVLALLRNYGCTNTHISKIVSRYPLLLTANPEKTLLPKLEFFRSVGFSGPDLASIVV 119

Query: 51  SSP 43
           SSP
Sbjct: 120 SSP 122


>emb|CAN68941.1| hypothetical protein VITISV_028996 [Vitis vinifera]
          Length = 2634

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/63 (52%), Positives = 48/63 (76%), Gaps = 3/63 (4%)
 Frame = -1

Query: 222 KPDSVISLFKSYGFTDSHISKVIAYHPQLLLASPEKRLKPKLEYFKSIGISDPIL---VN 52
           + DSV++L ++YG T++HISK+++ +P LL A+PEK L PKLE+F+S+G S P L   V 
Sbjct: 560 RADSVLALLRNYGCTNTHISKIVSRYPLLLTANPEKTLLPKLEFFRSVGFSGPDLASIVV 619

Query: 51  SSP 43
           SSP
Sbjct: 620 SSP 622



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/57 (50%), Positives = 45/57 (78%)
 Frame = -1

Query: 222  KPDSVISLFKSYGFTDSHISKVIAYHPQLLLASPEKRLKPKLEYFKSIGISDPILVN 52
            + DSV++L ++YG T++HISK+++ +P LL A+PEK L PKLE+F+S+G S P L +
Sbjct: 933  RADSVLALLRNYGCTNTHISKIVSRYPLLLTANPEKTLLPKLEFFRSVGFSGPDLAS 989



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/57 (50%), Positives = 45/57 (78%)
 Frame = -1

Query: 222  KPDSVISLFKSYGFTDSHISKVIAYHPQLLLASPEKRLKPKLEYFKSIGISDPILVN 52
            + DSV++L ++YG T++HISK+++ +P LL A+PEK L PKLE+F+S+G S P L +
Sbjct: 2315 RADSVLALLRNYGCTNTHISKIVSRYPVLLTANPEKTLLPKLEFFRSVGFSGPDLAS 2371



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 29/55 (52%), Positives = 44/55 (80%)
 Frame = -1

Query: 222  KPDSVISLFKSYGFTDSHISKVIAYHPQLLLASPEKRLKPKLEYFKSIGISDPIL 58
            + DSV++L ++YG T++HISK+++ +P LL A+PEK L PKLE+F+S+G S P L
Sbjct: 1826 RADSVLALLRNYGCTNTHISKIVSKYPLLLTANPEKTLLPKLEFFRSVGFSGPDL 1880



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/54 (53%), Positives = 42/54 (77%)
 Frame = -1

Query: 216 DSVISLFKSYGFTDSHISKVIAYHPQLLLASPEKRLKPKLEYFKSIGISDPILV 55
           DSV++L ++YG T++HISK+++ +P LL+A+ EK L PKLE+F S G S P LV
Sbjct: 81  DSVLALLRNYGCTNTHISKIVSKYPLLLIANSEKTLLPKLEFFXSAGFSGPDLV 134



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/51 (52%), Positives = 40/51 (78%)
 Frame = -1

Query: 222  KPDSVISLFKSYGFTDSHISKVIAYHPQLLLASPEKRLKPKLEYFKSIGIS 70
            + DSV++L ++YG T+ HISK+++ +P LL A+PEK L PKLE+F S+G S
Sbjct: 1295 RADSVLALLRNYGCTNXHISKIVSRYPLLLTANPEKTLLPKLEFFCSVGFS 1345


>ref|XP_002269635.2| PREDICTED: uncharacterized protein LOC100251083, partial [Vitis
           vinifera]
          Length = 375

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/57 (50%), Positives = 45/57 (78%)
 Frame = -1

Query: 222 KPDSVISLFKSYGFTDSHISKVIAYHPQLLLASPEKRLKPKLEYFKSIGISDPILVN 52
           + DSV++L ++YG T++HISK+++ +P LL A+PEK L PKLE+F+S+G S P L +
Sbjct: 79  RADSVLALLRNYGCTNTHISKIVSRYPLLLTANPEKTLLPKLEFFRSVGFSGPDLAS 135


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