BLASTX nr result

ID: Coptis25_contig00025923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025923
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002338928.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_003578364.1| PREDICTED: uncharacterized protein LOC100835...    67   2e-09
dbj|BAC20770.1| hypothetical protein [Oryza sativa Japonica Grou...    65   4e-09
ref|XP_002324388.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09

>ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|222868171|gb|EEF05302.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 58/122 (47%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
 Frame = -3

Query: 363 LAKELPDLQVLSLVLYTRQVLPIPANMTKFSHLKELALVVFLSSDFDLLSVASVLNASPC 184
           LAK+LP LQ LSL++   +VLP+PA   KF  LK+L L+++   D DLL+V  +LNASP 
Sbjct: 271 LAKDLPQLQFLSLIVKD-EVLPLPATSPKFISLKQLDLLIWPFIDSDLLTVIYLLNASPL 329

Query: 183 LQKFHLSL-QHGGVRVPRVERDYSKQLYYQLKEVEISGFHDKCDSLELAIHLLNNAIGLE 7
           L+   L + + G  R     R+YS+  +  LKEV++ GF DK +++ELAI+LL N I LE
Sbjct: 330 LEILQLKIGRQGEGRSNGERREYSRHTHSHLKEVKMEGFRDKWNAMELAIYLLKNTIALE 389

Query: 6   RM 1
           RM
Sbjct: 390 RM 391


>ref|XP_002338928.1| predicted protein [Populus trichocarpa] gi|222873948|gb|EEF11079.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 49/103 (47%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
 Frame = -3

Query: 306 VLPIPANMTKFSHLKELALVVFLSSDFDLLSVASVLNASPCLQKFHLSLQHGGV-RVPRV 130
           VLP+PA   KF  LK+L L+++   D DLL+V  +LNASP L+   L + H G  R    
Sbjct: 1   VLPLPATSPKFISLKQLDLLIWPFIDSDLLTVIYLLNASPLLEILQLKIGHQGEGRSNGE 60

Query: 129 ERDYSKQLYYQLKEVEISGFHDKCDSLELAIHLLNNAIGLERM 1
            R+YS+  +  LKEV++ GF DK +++ELAI+LL N I LERM
Sbjct: 61  RREYSRHTHSHLKEVKMEGFRDKWNAMELAIYLLKNTIALERM 103


>ref|XP_003578364.1| PREDICTED: uncharacterized protein LOC100835160 [Brachypodium
           distachyon]
          Length = 547

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
 Frame = -3

Query: 381 YYMFGGLAKELPDLQVLSL-VLYTRQVLPIPANMTKFSHLKELALVVFLSSDFDLLSVAS 205
           +Y +  L   +P+L+VL +   Y    L +PA   KF HL+ L +  F   D+D  S+ S
Sbjct: 325 HYAWAKLPCMVPNLEVLEISTSYLSDTLVVPAG--KFLHLRHLFIDGFCRPDYDHFSLVS 382

Query: 204 VLNASPCLQKFHLSLQHGGVRVPRVERDYSK-------QLYYQLKEVEISGFHDKCDSLE 46
            L+A P L+ F L ++H  +    V  D+S         L+  +K+V+I GF+     +E
Sbjct: 383 FLDACPYLETFRLFVEHDFMEDELVLGDFSHDLRQMPGHLHSNIKDVQILGFYSTKSIIE 442

Query: 45  LAIHLLNNAIGLERM 1
           L  H+L NA  LE +
Sbjct: 443 LTCHILENATSLESL 457


>dbj|BAC20770.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|125599211|gb|EAZ38787.1| hypothetical protein
           OsJ_23190 [Oryza sativa Japonica Group]
          Length = 515

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 10/136 (7%)
 Frame = -3

Query: 378 YMFGGLAKELPDLQVLSLVLYTRQVLPIPANMTKFSHLKELALVVFLSS----DFDLLSV 211
           Y+F  L   LP L++L+L     + + +P    KF +LK L L +  S     D D+L  
Sbjct: 300 YIFTELPSTLPRLEMLTLQCRELERITLPDKPIKFIYLKHLRLELAFSGPRKWDADILDF 359

Query: 210 ASVLNASPCLQKFHLSLQHGGVRVPRVERDYSKQL------YYQLKEVEISGFHDKCDSL 49
           A +L A+P ++K    +        R  + + K        +Y LKEV I+GF+ + D L
Sbjct: 360 ACILEAAPLMEKLEFHMWMNCRDHLRYRKAHGKLRTLPPCPHYHLKEVNIAGFYGQKDQL 419

Query: 48  ELAIHLLNNAIGLERM 1
           ELA H+L N++ L+ M
Sbjct: 420 ELAHHILRNSVVLQAM 435


>ref|XP_002324388.1| predicted protein [Populus trichocarpa] gi|222865822|gb|EEF02953.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 42/127 (33%), Positives = 72/127 (56%)
 Frame = -3

Query: 381 YYMFGGLAKELPDLQVLSLVLYTRQVLPIPANMTKFSHLKELALVVFLSSDFDLLSVASV 202
           +Y+F  L+K +P ++  SL + TR       +  K  HL+     V  +++FD+L + ++
Sbjct: 70  HYVFTRLSKHVPRMR--SLTVKTRYATASYMHTRKNHHLQRCC-EVNSNTEFDILKMIAI 126

Query: 201 LNASPCLQKFHLSLQHGGVRVPRVERDYSKQLYYQLKEVEISGFHDKCDSLELAIHLLNN 22
           L A P LQK +L        + R + ++S+ ++  LK+VEI GF+D  + +  AI+L  +
Sbjct: 127 LRAFPSLQKLYLETC-SSEDMGRGKLEHSEHVHKHLKQVEIGGFYDTSNQIGFAIYLFEH 185

Query: 21  AIGLERM 1
           AI LERM
Sbjct: 186 AISLERM 192


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