BLASTX nr result
ID: Coptis25_contig00025915
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025915 (762 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera] 270 2e-70 ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2... 253 2e-65 ref|XP_003564838.1| PREDICTED: pentatricopeptide repeat-containi... 248 1e-63 dbj|BAJ85493.1| predicted protein [Hordeum vulgare subsp. vulgare] 245 6e-63 ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containi... 243 3e-62 >emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera] Length = 549 Score = 270 bits (691), Expect = 2e-70 Identities = 136/200 (68%), Positives = 160/200 (80%) Frame = -2 Query: 761 YSGVIRGLLRIKDIEAAKTLLFKMIDEGPPPGNAVFNSVINVLCKAGRMEEARDLVKVME 582 Y+ VIRGL R KD++ AK LL KMI+ GPPPGNAVFN VIN L KAG MEEA ++K+ME Sbjct: 350 YTAVIRGLCRSKDVDGAKRLLLKMIEAGPPPGNAVFNFVINGLSKAGEMEEAMKMMKLME 409 Query: 581 NRGLRPDVYTYCVIMSGYAKKGLMEEAQNVFSEAKNTHSILSPVTYHVLTRGYCKIEEFD 402 RGL+PDVYTY VIMSGYA G+MEEA V SEAK HS LSPVTYH L RGYCK+E+FD Sbjct: 410 TRGLKPDVYTYSVIMSGYAHGGMMEEACRVLSEAKRNHSKLSPVTYHTLIRGYCKLEQFD 469 Query: 401 KALKLFNEMKESGLKPNDDEYNKMIQSLCLEAFDWRTAEKLLEEMKENDLCVDGITRDLI 222 KA++L EMKE G++PN DEYNK+IQSLCL+A DW+TAEKLLEEMK+N L ++GITR LI Sbjct: 470 KAVELLGEMKEHGVQPNTDEYNKLIQSLCLKALDWQTAEKLLEEMKQNGLHLNGITRGLI 529 Query: 221 TAVKELEEHKVNAEKEFEIE 162 AVKELEE + A +E +E Sbjct: 530 RAVKELEE-EGRATEELRVE 548 >ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1| predicted protein [Populus trichocarpa] Length = 476 Score = 253 bits (647), Expect = 2e-65 Identities = 125/199 (62%), Positives = 156/199 (78%) Frame = -2 Query: 761 YSGVIRGLLRIKDIEAAKTLLFKMIDEGPPPGNAVFNSVINVLCKAGRMEEARDLVKVME 582 +S VIRGL RIKD++ AK LL KMI EGPPPGNAVFN+VI+ CK G M+EA +++K+ME Sbjct: 278 FSSVIRGLCRIKDLDGAKQLLSKMIVEGPPPGNAVFNTVISGYCKGGDMKEAIEIMKLME 337 Query: 581 NRGLRPDVYTYCVIMSGYAKKGLMEEAQNVFSEAKNTHSILSPVTYHVLTRGYCKIEEFD 402 +RGL+PDVYTY VI+SGY+ G MEEA + SEAK HS LSPVTYH L RGYCK+++FD Sbjct: 338 SRGLKPDVYTYTVIISGYSNGGQMEEACYILSEAKKKHSKLSPVTYHALIRGYCKLDQFD 397 Query: 401 KALKLFNEMKESGLKPNDDEYNKMIQSLCLEAFDWRTAEKLLEEMKENDLCVDGITRDLI 222 KAL+L EM++ G++PN DEYNK+IQSLCL++ DW TAEKL EMKE L ++ ITR LI Sbjct: 398 KALELLAEMEKFGVQPNADEYNKLIQSLCLKSLDWGTAEKLFAEMKEKGLYLNSITRSLI 457 Query: 221 TAVKELEEHKVNAEKEFEI 165 TAVKELE+ + E E+ Sbjct: 458 TAVKELEQEGLAKEVSIEV 476 >ref|XP_003564838.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650, mitochondrial-like isoform 1 [Brachypodium distachyon] gi|357126326|ref|XP_003564839.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650, mitochondrial-like isoform 2 [Brachypodium distachyon] Length = 552 Score = 248 bits (632), Expect = 1e-63 Identities = 117/196 (59%), Positives = 153/196 (78%) Frame = -2 Query: 761 YSGVIRGLLRIKDIEAAKTLLFKMIDEGPPPGNAVFNSVINVLCKAGRMEEARDLVKVME 582 ++ VI GL R+ +++ AK LL +M++ GP PG+AVFN VI L K G ME+A+ L++VME Sbjct: 355 FAAVIHGLCRMNNVKDAKKLLMRMVNLGPAPGSAVFNLVITALSKEGEMEDAKGLIRVME 414 Query: 581 NRGLRPDVYTYCVIMSGYAKKGLMEEAQNVFSEAKNTHSILSPVTYHVLTRGYCKIEEFD 402 +RGLRPD+YTY VIMSGY K G++ EA ++ EAK H LS VTYH+L RGYCK+EEF+ Sbjct: 415 SRGLRPDIYTYSVIMSGYTKGGMISEAHSLLREAKKIHPKLSRVTYHILIRGYCKMEEFE 474 Query: 401 KALKLFNEMKESGLKPNDDEYNKMIQSLCLEAFDWRTAEKLLEEMKENDLCVDGITRDLI 222 KAL+ NEMKE GL+PN DEYNK+IQSLCL+A DWRTAEKLLEEM+ + LC+ GITR L+ Sbjct: 475 KALECLNEMKEDGLQPNMDEYNKLIQSLCLKAMDWRTAEKLLEEMESSGLCLKGITRSLV 534 Query: 221 TAVKELEEHKVNAEKE 174 AVKELE +++ + + Sbjct: 535 AAVKELEMEEMSKDSQ 550 >dbj|BAJ85493.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 567 Score = 245 bits (626), Expect = 6e-63 Identities = 119/196 (60%), Positives = 152/196 (77%) Frame = -2 Query: 761 YSGVIRGLLRIKDIEAAKTLLFKMIDEGPPPGNAVFNSVINVLCKAGRMEEARDLVKVME 582 ++ VI L R+K++ AK LL +M++ GP PG+AVFN VI L K G ME+A+DL++VME Sbjct: 370 FAAVIHSLCRMKNVNDAKKLLMRMVNLGPAPGSAVFNFVITGLSKEGEMEDAKDLIRVME 429 Query: 581 NRGLRPDVYTYCVIMSGYAKKGLMEEAQNVFSEAKNTHSILSPVTYHVLTRGYCKIEEFD 402 +RGLRPDVYTY VIMSGYAK G+++EA ++ EAK H S VTYH+L RGYCK+EEF+ Sbjct: 430 SRGLRPDVYTYSVIMSGYAKGGMIDEAHSLLREAKKIHPKPSRVTYHILIRGYCKMEEFE 489 Query: 401 KALKLFNEMKESGLKPNDDEYNKMIQSLCLEAFDWRTAEKLLEEMKENDLCVDGITRDLI 222 KAL+ EMKE GL+PN DEYNK+IQSLCL+A DWRTAEKLLEEM+ + LC+ GITR LI Sbjct: 490 KALECLKEMKEDGLQPNMDEYNKLIQSLCLKAMDWRTAEKLLEEMEGSGLCLKGITRSLI 549 Query: 221 TAVKELEEHKVNAEKE 174 AVKELE + + + + Sbjct: 550 AAVKELEMEEASKDSQ 565 >ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650, mitochondrial-like [Cucumis sativus] gi|449477884|ref|XP_004155152.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650, mitochondrial-like [Cucumis sativus] Length = 479 Score = 243 bits (620), Expect = 3e-62 Identities = 120/195 (61%), Positives = 150/195 (76%) Frame = -2 Query: 761 YSGVIRGLLRIKDIEAAKTLLFKMIDEGPPPGNAVFNSVINVLCKAGRMEEARDLVKVME 582 Y VIR L RIKD AKTLL KMI EGPPPGNA FN+VI KAG +EEA +L+K+ME Sbjct: 280 YMEVIRSLCRIKDTSKAKTLLQKMIAEGPPPGNAAFNAVICGYSKAGDLEEAMELIKLME 339 Query: 581 NRGLRPDVYTYCVIMSGYAKKGLMEEAQNVFSEAKNTHSILSPVTYHVLTRGYCKIEEFD 402 +RGL+PDVY+Y ++SGYAK G M+EA V EAK H+ LS +TYH L R +CK+EE+D Sbjct: 340 SRGLKPDVYSYTAVISGYAKGGQMKEAYEVLDEAKKKHAKLSHITYHTLIRNHCKLEEYD 399 Query: 401 KALKLFNEMKESGLKPNDDEYNKMIQSLCLEAFDWRTAEKLLEEMKENDLCVDGITRDLI 222 ALKL +EMK G++PN DEYNK+I+SLCL+A DWRT+E+L EEMKEN L ++GITR LI Sbjct: 400 SALKLLSEMKNFGVQPNVDEYNKLIRSLCLKAVDWRTSERLFEEMKENGLHLNGITRGLI 459 Query: 221 TAVKELEEHKVNAEK 177 AV+ELEE ++ E+ Sbjct: 460 RAVRELEEEELTTEE 474