BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025915
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]   270   2e-70
ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2...   253   2e-65
ref|XP_003564838.1| PREDICTED: pentatricopeptide repeat-containi...   248   1e-63
dbj|BAJ85493.1| predicted protein [Hordeum vulgare subsp. vulgare]    245   6e-63
ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containi...   243   3e-62

>emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]
          Length = 549

 Score =  270 bits (691), Expect = 2e-70
 Identities = 136/200 (68%), Positives = 160/200 (80%)
 Frame = -2

Query: 761 YSGVIRGLLRIKDIEAAKTLLFKMIDEGPPPGNAVFNSVINVLCKAGRMEEARDLVKVME 582
           Y+ VIRGL R KD++ AK LL KMI+ GPPPGNAVFN VIN L KAG MEEA  ++K+ME
Sbjct: 350 YTAVIRGLCRSKDVDGAKRLLLKMIEAGPPPGNAVFNFVINGLSKAGEMEEAMKMMKLME 409

Query: 581 NRGLRPDVYTYCVIMSGYAKKGLMEEAQNVFSEAKNTHSILSPVTYHVLTRGYCKIEEFD 402
            RGL+PDVYTY VIMSGYA  G+MEEA  V SEAK  HS LSPVTYH L RGYCK+E+FD
Sbjct: 410 TRGLKPDVYTYSVIMSGYAHGGMMEEACRVLSEAKRNHSKLSPVTYHTLIRGYCKLEQFD 469

Query: 401 KALKLFNEMKESGLKPNDDEYNKMIQSLCLEAFDWRTAEKLLEEMKENDLCVDGITRDLI 222
           KA++L  EMKE G++PN DEYNK+IQSLCL+A DW+TAEKLLEEMK+N L ++GITR LI
Sbjct: 470 KAVELLGEMKEHGVQPNTDEYNKLIQSLCLKALDWQTAEKLLEEMKQNGLHLNGITRGLI 529

Query: 221 TAVKELEEHKVNAEKEFEIE 162
            AVKELEE +  A +E  +E
Sbjct: 530 RAVKELEE-EGRATEELRVE 548


>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  253 bits (647), Expect = 2e-65
 Identities = 125/199 (62%), Positives = 156/199 (78%)
 Frame = -2

Query: 761 YSGVIRGLLRIKDIEAAKTLLFKMIDEGPPPGNAVFNSVINVLCKAGRMEEARDLVKVME 582
           +S VIRGL RIKD++ AK LL KMI EGPPPGNAVFN+VI+  CK G M+EA +++K+ME
Sbjct: 278 FSSVIRGLCRIKDLDGAKQLLSKMIVEGPPPGNAVFNTVISGYCKGGDMKEAIEIMKLME 337

Query: 581 NRGLRPDVYTYCVIMSGYAKKGLMEEAQNVFSEAKNTHSILSPVTYHVLTRGYCKIEEFD 402
           +RGL+PDVYTY VI+SGY+  G MEEA  + SEAK  HS LSPVTYH L RGYCK+++FD
Sbjct: 338 SRGLKPDVYTYTVIISGYSNGGQMEEACYILSEAKKKHSKLSPVTYHALIRGYCKLDQFD 397

Query: 401 KALKLFNEMKESGLKPNDDEYNKMIQSLCLEAFDWRTAEKLLEEMKENDLCVDGITRDLI 222
           KAL+L  EM++ G++PN DEYNK+IQSLCL++ DW TAEKL  EMKE  L ++ ITR LI
Sbjct: 398 KALELLAEMEKFGVQPNADEYNKLIQSLCLKSLDWGTAEKLFAEMKEKGLYLNSITRSLI 457

Query: 221 TAVKELEEHKVNAEKEFEI 165
           TAVKELE+  +  E   E+
Sbjct: 458 TAVKELEQEGLAKEVSIEV 476


>ref|XP_003564838.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like isoform 1 [Brachypodium distachyon]
           gi|357126326|ref|XP_003564839.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like isoform 2 [Brachypodium distachyon]
          Length = 552

 Score =  248 bits (632), Expect = 1e-63
 Identities = 117/196 (59%), Positives = 153/196 (78%)
 Frame = -2

Query: 761 YSGVIRGLLRIKDIEAAKTLLFKMIDEGPPPGNAVFNSVINVLCKAGRMEEARDLVKVME 582
           ++ VI GL R+ +++ AK LL +M++ GP PG+AVFN VI  L K G ME+A+ L++VME
Sbjct: 355 FAAVIHGLCRMNNVKDAKKLLMRMVNLGPAPGSAVFNLVITALSKEGEMEDAKGLIRVME 414

Query: 581 NRGLRPDVYTYCVIMSGYAKKGLMEEAQNVFSEAKNTHSILSPVTYHVLTRGYCKIEEFD 402
           +RGLRPD+YTY VIMSGY K G++ EA ++  EAK  H  LS VTYH+L RGYCK+EEF+
Sbjct: 415 SRGLRPDIYTYSVIMSGYTKGGMISEAHSLLREAKKIHPKLSRVTYHILIRGYCKMEEFE 474

Query: 401 KALKLFNEMKESGLKPNDDEYNKMIQSLCLEAFDWRTAEKLLEEMKENDLCVDGITRDLI 222
           KAL+  NEMKE GL+PN DEYNK+IQSLCL+A DWRTAEKLLEEM+ + LC+ GITR L+
Sbjct: 475 KALECLNEMKEDGLQPNMDEYNKLIQSLCLKAMDWRTAEKLLEEMESSGLCLKGITRSLV 534

Query: 221 TAVKELEEHKVNAEKE 174
            AVKELE  +++ + +
Sbjct: 535 AAVKELEMEEMSKDSQ 550


>dbj|BAJ85493.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 567

 Score =  245 bits (626), Expect = 6e-63
 Identities = 119/196 (60%), Positives = 152/196 (77%)
 Frame = -2

Query: 761 YSGVIRGLLRIKDIEAAKTLLFKMIDEGPPPGNAVFNSVINVLCKAGRMEEARDLVKVME 582
           ++ VI  L R+K++  AK LL +M++ GP PG+AVFN VI  L K G ME+A+DL++VME
Sbjct: 370 FAAVIHSLCRMKNVNDAKKLLMRMVNLGPAPGSAVFNFVITGLSKEGEMEDAKDLIRVME 429

Query: 581 NRGLRPDVYTYCVIMSGYAKKGLMEEAQNVFSEAKNTHSILSPVTYHVLTRGYCKIEEFD 402
           +RGLRPDVYTY VIMSGYAK G+++EA ++  EAK  H   S VTYH+L RGYCK+EEF+
Sbjct: 430 SRGLRPDVYTYSVIMSGYAKGGMIDEAHSLLREAKKIHPKPSRVTYHILIRGYCKMEEFE 489

Query: 401 KALKLFNEMKESGLKPNDDEYNKMIQSLCLEAFDWRTAEKLLEEMKENDLCVDGITRDLI 222
           KAL+   EMKE GL+PN DEYNK+IQSLCL+A DWRTAEKLLEEM+ + LC+ GITR LI
Sbjct: 490 KALECLKEMKEDGLQPNMDEYNKLIQSLCLKAMDWRTAEKLLEEMEGSGLCLKGITRSLI 549

Query: 221 TAVKELEEHKVNAEKE 174
            AVKELE  + + + +
Sbjct: 550 AAVKELEMEEASKDSQ 565


>ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
           gi|449477884|ref|XP_004155152.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
          Length = 479

 Score =  243 bits (620), Expect = 3e-62
 Identities = 120/195 (61%), Positives = 150/195 (76%)
 Frame = -2

Query: 761 YSGVIRGLLRIKDIEAAKTLLFKMIDEGPPPGNAVFNSVINVLCKAGRMEEARDLVKVME 582
           Y  VIR L RIKD   AKTLL KMI EGPPPGNA FN+VI    KAG +EEA +L+K+ME
Sbjct: 280 YMEVIRSLCRIKDTSKAKTLLQKMIAEGPPPGNAAFNAVICGYSKAGDLEEAMELIKLME 339

Query: 581 NRGLRPDVYTYCVIMSGYAKKGLMEEAQNVFSEAKNTHSILSPVTYHVLTRGYCKIEEFD 402
           +RGL+PDVY+Y  ++SGYAK G M+EA  V  EAK  H+ LS +TYH L R +CK+EE+D
Sbjct: 340 SRGLKPDVYSYTAVISGYAKGGQMKEAYEVLDEAKKKHAKLSHITYHTLIRNHCKLEEYD 399

Query: 401 KALKLFNEMKESGLKPNDDEYNKMIQSLCLEAFDWRTAEKLLEEMKENDLCVDGITRDLI 222
            ALKL +EMK  G++PN DEYNK+I+SLCL+A DWRT+E+L EEMKEN L ++GITR LI
Sbjct: 400 SALKLLSEMKNFGVQPNVDEYNKLIRSLCLKAVDWRTSERLFEEMKENGLHLNGITRGLI 459

Query: 221 TAVKELEEHKVNAEK 177
            AV+ELEE ++  E+
Sbjct: 460 RAVRELEEEELTTEE 474