BLASTX nr result

ID: Coptis25_contig00025912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025912
         (1040 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148743.1| PREDICTED: uncharacterized protein At4g17910...   140   7e-31
emb|CBI33873.3| unnamed protein product [Vitis vinifera]              136   7e-30
ref|XP_002868031.1| hypothetical protein ARALYDRAFT_354960 [Arab...   134   5e-29
ref|XP_003557819.1| PREDICTED: uncharacterized protein At4g17910...   122   1e-25
gb|AFW87972.1| hypothetical protein ZEAMMB73_054868 [Zea mays]        122   2e-25

>ref|XP_004148743.1| PREDICTED: uncharacterized protein At4g17910-like [Cucumis sativus]
            gi|449515271|ref|XP_004164673.1| PREDICTED:
            uncharacterized protein At4g17910-like [Cucumis sativus]
          Length = 471

 Score =  140 bits (352), Expect = 7e-31
 Identities = 94/220 (42%), Positives = 114/220 (51%), Gaps = 2/220 (0%)
 Frame = +2

Query: 359  HSSNPYKQFKEEFISNLSGSSMLEIVALTAIVPXXXXXXXXXXXXXXXXXXXXXXXXFSF 538
            +S NP K  KEEF+SNL+GSSM+EI AL+AI+P                         SF
Sbjct: 7    NSLNPNKLLKEEFVSNLTGSSMIEIAALSAIIPILVLLRH------------------SF 48

Query: 539  KGHNDPVHIM-KATSKVGDKAIIGCRIWNAYIIALAADXXXXXXXXXXXXXXXAEWTQLS 715
               N   H    A+ K  D  +I  +    Y+ A+A D               A+W+ L 
Sbjct: 49   SSTNVVDHTAANASLKKSDGLVIRTKSLKRYLAAIAVDFLIIVIPTLLFFTVLADWSCLC 108

Query: 716  SICLTLLLFVGFAVK-RFRXXXXXDGGRQATYXXXXXXXXXXXXXXXXXCLCILAVDFKI 892
            +I LTLLL +  A K         + G Q+                   CLCILAVDF+I
Sbjct: 109  AILLTLLLLLLIAAKGMLNHSPTWEAGNQSL---RANISSFRVVVMITTCLCILAVDFRI 165

Query: 893  FPRRYAKTETYGTGLMDLGVGSFVLANALVSRQARDVLST 1012
            FPRRYAKTETYGT LMDLGVGSFVLAN+LVSRQAR+VLST
Sbjct: 166  FPRRYAKTETYGTSLMDLGVGSFVLANSLVSRQARNVLST 205


>emb|CBI33873.3| unnamed protein product [Vitis vinifera]
          Length = 480

 Score =  136 bits (343), Expect = 7e-30
 Identities = 87/216 (40%), Positives = 107/216 (49%)
 Frame = +2

Query: 362  SSNPYKQFKEEFISNLSGSSMLEIVALTAIVPXXXXXXXXXXXXXXXXXXXXXXXXFSFK 541
            S NP K  KE+F+SNL+GSS+LEIVAL+ +VP                         +F 
Sbjct: 7    SFNPNKHLKEQFVSNLTGSSILEIVALSTVVPSLIVLRHL----------------IAFH 50

Query: 542  GHNDPVHIMKATSKVGDKAIIGCRIWNAYIIALAADXXXXXXXXXXXXXXXAEWTQLSSI 721
               DP     +  K  +  ++    W AY+  +  D               AEWTQ+ +I
Sbjct: 51   RLFDPWATETSLKKSDNATVVSKNSW-AYMATMTVDFLVIVLPILLFLTVLAEWTQICAI 109

Query: 722  CLTLLLFVGFAVKRFRXXXXXDGGRQATYXXXXXXXXXXXXXXXXXCLCILAVDFKIFPR 901
             L L+L    A KRF       GG   T                  CLCILAVDF+IFPR
Sbjct: 110  LLMLVLLFSIAAKRFISSHYSLGG--GTNSLRTNISSYRVSMMIVTCLCILAVDFQIFPR 167

Query: 902  RYAKTETYGTGLMDLGVGSFVLANALVSRQARDVLS 1009
            RYAKTETYGT LMDLGVGSFVL NAL+S QAR++ S
Sbjct: 168  RYAKTETYGTSLMDLGVGSFVLGNALISHQARNIAS 203


>ref|XP_002868031.1| hypothetical protein ARALYDRAFT_354960 [Arabidopsis lyrata subsp.
            lyrata] gi|297313867|gb|EFH44290.1| hypothetical protein
            ARALYDRAFT_354960 [Arabidopsis lyrata subsp. lyrata]
          Length = 746

 Score =  134 bits (336), Expect = 5e-29
 Identities = 89/214 (41%), Positives = 109/214 (50%)
 Frame = +2

Query: 368  NPYKQFKEEFISNLSGSSMLEIVALTAIVPXXXXXXXXXXXXXXXXXXXXXXXXFSFKGH 547
            NP K  KE+F+SNL GSS+LEI AL  IVP                        F +K  
Sbjct: 10   NPNKHLKEQFVSNLDGSSILEIAALLTIVPLLVLLRYSID--------------FHWKID 55

Query: 548  NDPVHIMKATSKVGDKAIIGCRIWNAYIIALAADXXXXXXXXXXXXXXXAEWTQLSSICL 727
            N+   I   +SK  D  I+  R W AY  A++ D               +EW  L ++ L
Sbjct: 56   NNNGGIA-VSSKKNDDEIVVSRNWKAYTHAISLDFILIVFPMLLFFTVLSEWVYLGAVLL 114

Query: 728  TLLLFVGFAVKRFRXXXXXDGGRQATYXXXXXXXXXXXXXXXXXCLCILAVDFKIFPRRY 907
            +LLL +  ++   R       G+  ++                 CLCILAVDF IFPRRY
Sbjct: 115  SLLLLI-LSLTAKRSSSGLQRGQSLSFRASVSSYRVALMLIT--CLCILAVDFTIFPRRY 171

Query: 908  AKTETYGTGLMDLGVGSFVLANALVSRQARDVLS 1009
            AKTETYGT LMDLGVGSFVLANA+VSRQARDV S
Sbjct: 172  AKTETYGTSLMDLGVGSFVLANAIVSRQARDVSS 205


>ref|XP_003557819.1| PREDICTED: uncharacterized protein At4g17910-like [Brachypodium
            distachyon]
          Length = 463

 Score =  122 bits (306), Expect = 1e-25
 Identities = 85/217 (39%), Positives = 105/217 (48%), Gaps = 1/217 (0%)
 Frame = +2

Query: 362  SSNPYKQFKEEFISNLSGSSMLEIVALTAIVPXXXXXXXXXXXXXXXXXXXXXXXXFSFK 541
            S NP K  KE+F+SNL+GSS+LEI AL+ IVP                            
Sbjct: 8    SLNPNKLLKEQFVSNLTGSSLLEIAALSTIVPAVVVLRKWS------------------S 49

Query: 542  GHNDPVHIMKATSKVGDKAIIGCRIWNAYIIALAADXXXXXXXXXXXXXXXAEWTQLSSI 721
            G N    IM+ + K  D ++   + W  Y   LA D               AEW  + +I
Sbjct: 50   GDN----IMRRSVKKNDDSLRDHKDWVYYFSVLAIDYLTVVCPILLIFTVLAEWAYICAI 105

Query: 722  CLTLLLFVGFAVKRFRXXXXXDGGRQATYXXXXXXXXXXXXXXXXX-CLCILAVDFKIFP 898
             L  ++F+    KR +        RQ                     CL ILAVDFKIFP
Sbjct: 106  SLVTVIFIYIMFKRSQSHLK---ARQHNLPSLRADISSYRVSVVLMTCLSILAVDFKIFP 162

Query: 899  RRYAKTETYGTGLMDLGVGSFVLANALVSRQARDVLS 1009
            RRYAK ETYG+G+MDLGVGSFV+ANALVSRQAR+V S
Sbjct: 163  RRYAKAETYGSGIMDLGVGSFVVANALVSRQARNVTS 199


>gb|AFW87972.1| hypothetical protein ZEAMMB73_054868 [Zea mays]
          Length = 381

 Score =  122 bits (305), Expect = 2e-25
 Identities = 81/214 (37%), Positives = 104/214 (48%)
 Frame = +2

Query: 368  NPYKQFKEEFISNLSGSSMLEIVALTAIVPXXXXXXXXXXXXXXXXXXXXXXXXFSFKGH 547
            NP K  KE+F+SNL+GSS+LEI AL+ +VP                         S K +
Sbjct: 11   NPNKLLKEQFVSNLTGSSLLEIAALSTVVPALVVLRKWSSRDNSRKE--------SAKKN 62

Query: 548  NDPVHIMKATSKVGDKAIIGCRIWNAYIIALAADXXXXXXXXXXXXXXXAEWTQLSSICL 727
            +D VH ++             + W  Y   L  D               +EW  + +I L
Sbjct: 63   DDQVHTVR-------------KDWMQYFSTLGVDYLTVVLPIILVFTVLSEWVFMCAISL 109

Query: 728  TLLLFVGFAVKRFRXXXXXDGGRQATYXXXXXXXXXXXXXXXXXCLCILAVDFKIFPRRY 907
             +L+ +    KR +     DG  Q                    CLCILAVDFKIFPRRY
Sbjct: 110  VILISIYIMFKRSQFHLK-DGFSQLPLLRADISSYRVSVVLVT-CLCILAVDFKIFPRRY 167

Query: 908  AKTETYGTGLMDLGVGSFVLANALVSRQARDVLS 1009
            AK ETYG+G+MDLGVGSFV+ANALVSRQAR++ S
Sbjct: 168  AKAETYGSGIMDLGVGSFVVANALVSRQARNIAS 201


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