BLASTX nr result

ID: Coptis25_contig00025911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025911
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517368.1| ubiquitin-conjugating enzyme h, putative [Ri...    73   2e-11
ref|XP_003549634.1| PREDICTED: ubiquitin-conjugating enzyme E2 5...    69   3e-10
ref|XP_002511435.1| ubiquitin-conjugating enzyme h, putative [Ri...    69   3e-10
ref|XP_002280126.2| PREDICTED: ubiquitin-conjugating enzyme E2 5...    69   3e-10
ref|NP_001237311.1| uncharacterized protein LOC100527526 [Glycin...    68   7e-10

>ref|XP_002517368.1| ubiquitin-conjugating enzyme h, putative [Ricinus communis]
           gi|223543379|gb|EEF44910.1| ubiquitin-conjugating enzyme
           h, putative [Ricinus communis]
          Length = 186

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/36 (94%), Positives = 36/36 (100%)
 Frame = -3

Query: 108 MSSPSKRRDMDVMKLMMSDYSVEPINDGINEFNVEF 1
           MSSPSKRRDMDVMKLMMSDY+VEPINDGINEFNV+F
Sbjct: 1   MSSPSKRRDMDVMKLMMSDYTVEPINDGINEFNVKF 36


>ref|XP_003549634.1| PREDICTED: ubiquitin-conjugating enzyme E2 5-like isoform 1
           [Glycine max] gi|356562757|ref|XP_003549635.1|
           PREDICTED: ubiquitin-conjugating enzyme E2 5-like
           isoform 2 [Glycine max]
          Length = 184

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/36 (88%), Positives = 35/36 (97%)
 Frame = -3

Query: 108 MSSPSKRRDMDVMKLMMSDYSVEPINDGINEFNVEF 1
           MSSPSKRR+MDVMKLMMSDY+VE INDG+NEFNVEF
Sbjct: 1   MSSPSKRREMDVMKLMMSDYAVETINDGLNEFNVEF 36


>ref|XP_002511435.1| ubiquitin-conjugating enzyme h, putative [Ricinus communis]
           gi|223550550|gb|EEF52037.1| ubiquitin-conjugating enzyme
           h, putative [Ricinus communis]
          Length = 184

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/36 (88%), Positives = 35/36 (97%)
 Frame = -3

Query: 108 MSSPSKRRDMDVMKLMMSDYSVEPINDGINEFNVEF 1
           MSSPSKRR+MDVMKLMMSDY+VE INDG+NEFNVEF
Sbjct: 1   MSSPSKRREMDVMKLMMSDYNVETINDGLNEFNVEF 36


>ref|XP_002280126.2| PREDICTED: ubiquitin-conjugating enzyme E2 5-like isoform 1 [Vitis
           vinifera] gi|359491603|ref|XP_003634294.1| PREDICTED:
           ubiquitin-conjugating enzyme E2 5-like isoform 2 [Vitis
           vinifera] gi|297733817|emb|CBI15064.3| unnamed protein
           product [Vitis vinifera]
          Length = 184

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/36 (88%), Positives = 35/36 (97%)
 Frame = -3

Query: 108 MSSPSKRRDMDVMKLMMSDYSVEPINDGINEFNVEF 1
           MSSPSKRR+MDVMKLMMSDY+VE INDG+NEFNVEF
Sbjct: 1   MSSPSKRREMDVMKLMMSDYNVETINDGLNEFNVEF 36


>ref|NP_001237311.1| uncharacterized protein LOC100527526 [Glycine max]
           gi|255632544|gb|ACU16622.1| unknown [Glycine max]
          Length = 185

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/36 (86%), Positives = 35/36 (97%)
 Frame = -3

Query: 108 MSSPSKRRDMDVMKLMMSDYSVEPINDGINEFNVEF 1
           MSSPSKRR+MDVMKLMMSDY++E INDG+NEFNVEF
Sbjct: 1   MSSPSKRREMDVMKLMMSDYTMETINDGLNEFNVEF 36


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