BLASTX nr result

ID: Coptis25_contig00025903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025903
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19383.3| unnamed protein product [Vitis vinifera]               59   4e-07
ref|XP_003538633.1| PREDICTED: uncharacterized protein LOC100797...    57   2e-06

>emb|CBI19383.3| unnamed protein product [Vitis vinifera]
          Length = 118

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/63 (42%), Positives = 37/63 (58%)
 Frame = -3

Query: 348 PTLDYNSRNFTLTNQPVSIENALDFSQGFSGTHYNATYAIQNHTDFLQSSLPGKSTSAKP 169
           P L ++ + F+ T+   S+E+ LDFSQGFS TH+    A Q H  F +SS   K  S +P
Sbjct: 50  PVLSFSKKKFSPTSDQGSMEHGLDFSQGFSATHFKGKSAFQKHIGFFKSSFADKPPSDQP 109

Query: 168 VGC 160
            GC
Sbjct: 110 GGC 112


>ref|XP_003538633.1| PREDICTED: uncharacterized protein LOC100797069 [Glycine max]
          Length = 184

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/50 (48%), Positives = 34/50 (68%)
 Frame = -3

Query: 348 PTLDYNSRNFTLTNQPVSIENALDFSQGFSGTHYNATYAIQNHTDFLQSS 199
           P  D++  NFT+T Q  S E+ LD+SQGFS T+Y    ++Q+H +FLQ S
Sbjct: 115 PVFDFSMNNFTVTKQQTSAESMLDYSQGFSATYYEERSSLQDHFEFLQQS 164


Top