BLASTX nr result
ID: Coptis25_contig00025892
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025892 (425 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002315623.1| acyl:coa ligase [Populus trichocarpa] gi|222... 132 4e-29 gb|AGE10622.1| 4-coumarate CoA ligase, partial [Lonicera macrant... 128 6e-28 ref|XP_002511221.1| AMP dependent CoA ligase, putative [Ricinus ... 125 4e-27 gb|AGE10595.1| 4-coumarate CoA ligase [Lonicera japonica] 124 1e-26 gb|ADN33954.1| 4-coumarate-CoA ligase [Cucumis melo subsp. melo] 124 1e-26 >ref|XP_002315623.1| acyl:coa ligase [Populus trichocarpa] gi|222864663|gb|EEF01794.1| acyl:coa ligase [Populus trichocarpa] Length = 552 Score = 132 bits (331), Expect = 4e-29 Identities = 65/125 (52%), Positives = 86/125 (68%) Frame = +1 Query: 46 DLKSGFSSKTRIFHSLRPKVQLPPPNLPLSAAQHAIXXXXXXXXXXXXTTALIDSVSGTR 225 D KSGF SKT +HSLRP +QLPP P+SA ++AI TTAL+D+V+G R Sbjct: 10 DPKSGFCSKTNTYHSLRPHLQLPPITTPVSATEYAISLLLYSFPSPPQTTALLDAVTGRR 69 Query: 226 VSFTEFLKQAESLSVSLKTNFSLKKGDVAFILSPNILQVPILYISLLSLGVIVSPANPAS 405 +SF E + E+L+ SL F LKKGD AFILSPN + +PILY+SL +LGV++SP+NP S Sbjct: 70 ISFPELIHFTETLASSLLNRFRLKKGDTAFILSPNSIHIPILYLSLFTLGVVISPSNPLS 129 Query: 406 TVSEV 420 + E+ Sbjct: 130 SEQEI 134 >gb|AGE10622.1| 4-coumarate CoA ligase, partial [Lonicera macranthoides] Length = 162 Score = 128 bits (321), Expect = 6e-28 Identities = 66/127 (51%), Positives = 90/127 (70%) Frame = +1 Query: 43 FDLKSGFSSKTRIFHSLRPKVQLPPPNLPLSAAQHAIXXXXXXXXXXXXTTALIDSVSGT 222 FD SGFSS+T+ FHSL P + LPP +S+A +++ +T+LIDS +G Sbjct: 7 FDPNSGFSSQTKTFHSLTPPLPLPPETALISSATYSLSLQLTSPWPD--STSLIDSATGQ 64 Query: 223 RVSFTEFLKQAESLSVSLKTNFSLKKGDVAFILSPNILQVPILYISLLSLGVIVSPANPA 402 R+S+++F Q +LS SL++ L KGDVAFILSPN LQ+P+LY SLLSLGVI+SP+NP+ Sbjct: 65 RLSYSQFTTQTNNLSSSLQSRLGLSKGDVAFILSPNSLQIPLLYFSLLSLGVIISPSNPS 124 Query: 403 STVSEVS 423 ST SE+S Sbjct: 125 STESEIS 131 >ref|XP_002511221.1| AMP dependent CoA ligase, putative [Ricinus communis] gi|223550336|gb|EEF51823.1| AMP dependent CoA ligase, putative [Ricinus communis] Length = 549 Score = 125 bits (314), Expect = 4e-27 Identities = 66/128 (51%), Positives = 84/128 (65%) Frame = +1 Query: 40 NFDLKSGFSSKTRIFHSLRPKVQLPPPNLPLSAAQHAIXXXXXXXXXXXXTTALIDSVSG 219 N D +GF +T+ FHSLRP LPP + PLS AQ+A+ TT LIDS + Sbjct: 7 NIDPNNGFCKETKTFHSLRPSTPLPPSDQPLSIAQYAVSLLNSTTANLTATTFLIDSNTA 66 Query: 220 TRVSFTEFLKQAESLSVSLKTNFSLKKGDVAFILSPNILQVPILYISLLSLGVIVSPANP 399 ++F++FL + SLS SLKT+FSL DVAFIL P L VP+LY SLLSLG+ +SPANP Sbjct: 67 ESLTFSQFLNRTRSLSFSLKTHFSLSPNDVAFILCPASLHVPLLYFSLLSLGLTISPANP 126 Query: 400 ASTVSEVS 423 S+ SEV+ Sbjct: 127 LSSNSEVA 134 >gb|AGE10595.1| 4-coumarate CoA ligase [Lonicera japonica] Length = 540 Score = 124 bits (310), Expect = 1e-26 Identities = 65/127 (51%), Positives = 89/127 (70%) Frame = +1 Query: 43 FDLKSGFSSKTRIFHSLRPKVQLPPPNLPLSAAQHAIXXXXXXXXXXXXTTALIDSVSGT 222 FD SGFSS+T+ FHSL P + LPP +S+A +++ +T LIDS +G Sbjct: 4 FDPNSGFSSQTKTFHSLTPPLPLPPETALISSATYSLSLQLTSPWPD--STXLIDSATGQ 61 Query: 223 RVSFTEFLKQAESLSVSLKTNFSLKKGDVAFILSPNILQVPILYISLLSLGVIVSPANPA 402 R+S+++F Q +LS SL+++ L KGDVAFILS N LQ+P+LY SLLSLGVI+SP+NP+ Sbjct: 62 RLSYSQFTTQTNNLSSSLQSHLGLSKGDVAFILSLNSLQIPLLYFSLLSLGVIISPSNPS 121 Query: 403 STVSEVS 423 ST SE+S Sbjct: 122 STESEIS 128 >gb|ADN33954.1| 4-coumarate-CoA ligase [Cucumis melo subsp. melo] Length = 1055 Score = 124 bits (310), Expect = 1e-26 Identities = 66/129 (51%), Positives = 88/129 (68%) Frame = +1 Query: 37 YNFDLKSGFSSKTRIFHSLRPKVQLPPPNLPLSAAQHAIXXXXXXXXXXXXTTALIDSVS 216 ++ DL+SGF T+IFHSLRP + LPP + PLS QHA +T LIDS S Sbjct: 499 HSIDLRSGFCPLTKIFHSLRPPLSLPPLSQPLSVTQHAFSLLQSSSPPPN-STLLIDSNS 557 Query: 217 GTRVSFTEFLKQAESLSVSLKTNFSLKKGDVAFILSPNILQVPILYISLLSLGVIVSPAN 396 G +S+ FL+Q +L+ +LK+ SL G VAFIL+P LQ+P+LY +LLSLGV++SPAN Sbjct: 558 GLHLSYAIFLRQIRNLASNLKSLTSLCNGHVAFILAPTSLQIPVLYFALLSLGVVLSPAN 617 Query: 397 PASTVSEVS 423 P S+VSE+S Sbjct: 618 PTSSVSEIS 626 Score = 120 bits (302), Expect = 9e-26 Identities = 64/129 (49%), Positives = 87/129 (67%) Frame = +1 Query: 37 YNFDLKSGFSSKTRIFHSLRPKVQLPPPNLPLSAAQHAIXXXXXXXXXXXXTTALIDSVS 216 ++ D +SGF S+T+I+ SLRP + LPP + PL+ A HA+ T ALIDS S Sbjct: 4 HSVDSRSGFCSQTKIYKSLRPPLSLPPLSQPLTVAGHALSVLRSSPPPPN-TAALIDSDS 62 Query: 217 GTRVSFTEFLKQAESLSVSLKTNFSLKKGDVAFILSPNILQVPILYISLLSLGVIVSPAN 396 G VS+ FL+Q +L+ +LK +S G VAFILSP LQ+P+LY +LLSLGV+VSPAN Sbjct: 63 GVSVSYALFLRQIRNLTSNLKALYSFSNGQVAFILSPTSLQIPVLYFALLSLGVVVSPAN 122 Query: 397 PASTVSEVS 423 P S+ SE++ Sbjct: 123 PISSESEIA 131