BLASTX nr result

ID: Coptis25_contig00025871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025871
         (1355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267544.1| PREDICTED: uncharacterized protein LOC100254...   276   1e-71
emb|CBI26409.3| unnamed protein product [Vitis vinifera]              267   5e-69
ref|XP_003549166.1| PREDICTED: uncharacterized protein LOC100814...   258   3e-66
ref|XP_002519590.1| conserved hypothetical protein [Ricinus comm...   249   9e-64
ref|XP_003619781.1| hypothetical protein MTR_6g068920 [Medicago ...   248   3e-63

>ref|XP_002267544.1| PREDICTED: uncharacterized protein LOC100254610 [Vitis vinifera]
          Length = 457

 Score =  276 bits (705), Expect = 1e-71
 Identities = 144/200 (72%), Positives = 166/200 (83%), Gaps = 4/200 (2%)
 Frame = -3

Query: 1341 LGHKFSSLLSKMR---LHHVKAEALFGKD-ILNFDTTALIALVSGISNGGTEKLLATPES 1174
            LG  FSSL+  M+   LH    E L G+D ++NFDTTALIA+VSGISNGGTEKLLA PE+
Sbjct: 258  LGASFSSLILGMKFCCLHAEGVETLLGQDDLINFDTTALIAVVSGISNGGTEKLLAAPET 317

Query: 1173 ELRKRFKSNYEFVISQVRSELQNPILEELTCVVSGKVCMICESVHLEFKELVSMCGGSKE 994
            E+R RFK NY+FVI+QV SE+QNPI  EL+ + SGK  +ICE+VH EFKELVSMCGG  E
Sbjct: 318  EMRLRFKGNYKFVIAQVLSEIQNPIHVELSGLTSGKRGIICETVHSEFKELVSMCGGPNE 377

Query: 993  KLRADQLLKCLLIVPDSPSARMMDILTTRKIASKNKVVFGTGDQWLAPTLTANMGFVRAI 814
            KLRADQLLKCL++VPDSPSARMM + TTRK+A KNKVVFGTGD W APTLTANM FVRAI
Sbjct: 378  KLRADQLLKCLMVVPDSPSARMMGLPTTRKLALKNKVVFGTGDYWHAPTLTANMAFVRAI 437

Query: 813  SQTGMSLLTLEHKPRALTGD 754
            SQTGMSL T+EH+PRALTG+
Sbjct: 438  SQTGMSLFTIEHRPRALTGN 457


>emb|CBI26409.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  267 bits (682), Expect = 5e-69
 Identities = 135/178 (75%), Positives = 155/178 (87%), Gaps = 1/178 (0%)
 Frame = -3

Query: 1284 EALFGKD-ILNFDTTALIALVSGISNGGTEKLLATPESELRKRFKSNYEFVISQVRSELQ 1108
            E L G+D ++NFDTTALIA+VSGISNGGTEKLLA PE+E+R RFK NY+FVI+QV SE+Q
Sbjct: 155  ETLLGQDDLINFDTTALIAVVSGISNGGTEKLLAAPETEMRLRFKGNYKFVIAQVLSEIQ 214

Query: 1107 NPILEELTCVVSGKVCMICESVHLEFKELVSMCGGSKEKLRADQLLKCLLIVPDSPSARM 928
            NPI  EL+ + SGK  +ICE+VH EFKELVSMCGG  EKLRADQLLKCL++VPDSPSARM
Sbjct: 215  NPIHVELSGLTSGKRGIICETVHSEFKELVSMCGGPNEKLRADQLLKCLMVVPDSPSARM 274

Query: 927  MDILTTRKIASKNKVVFGTGDQWLAPTLTANMGFVRAISQTGMSLLTLEHKPRALTGD 754
            M + TTRK+A KNKVVFGTGD W APTLTANM FVRAISQTGMSL T+EH+PRALTG+
Sbjct: 275  MGLPTTRKLALKNKVVFGTGDYWHAPTLTANMAFVRAISQTGMSLFTIEHRPRALTGN 332


>ref|XP_003549166.1| PREDICTED: uncharacterized protein LOC100814429 [Glycine max]
          Length = 507

 Score =  258 bits (658), Expect = 3e-66
 Identities = 135/205 (65%), Positives = 161/205 (78%), Gaps = 9/205 (4%)
 Frame = -3

Query: 1341 LGHKFSSLLSKMRLHHVKAEA--------LFGK-DILNFDTTALIALVSGISNGGTEKLL 1189
            LG  F S+L  M+L  ++++A        L G+ D++NFDTTALIALVSGISNGGTEKLL
Sbjct: 303  LGVMFCSILMGMKLSSMESKACESSNPGNLLGETDLVNFDTTALIALVSGISNGGTEKLL 362

Query: 1188 ATPESELRKRFKSNYEFVISQVRSELQNPILEELTCVVSGKVCMICESVHLEFKELVSMC 1009
            ATPES +R+RFK NY+FVI Q+ SE+QNPI  E   ++ GK  +ICESV  EFKELVSMC
Sbjct: 363  ATPESGMRQRFKGNYDFVIGQITSEIQNPIHMEFDRILRGKNGLICESVLTEFKELVSMC 422

Query: 1008 GGSKEKLRADQLLKCLLIVPDSPSARMMDILTTRKIASKNKVVFGTGDQWLAPTLTANMG 829
            GG  EKLRAD L+ CL +VPD+PS RMM + +TRK+A KNKVVFGTGD W APTLTANM 
Sbjct: 423  GGPNEKLRADWLINCLRVVPDTPSERMMGLPSTRKLALKNKVVFGTGDHWHAPTLTANMA 482

Query: 828  FVRAISQTGMSLLTLEHKPRALTGD 754
            FVRA+SQTGMSL T+EH+PRALTGD
Sbjct: 483  FVRAVSQTGMSLSTIEHRPRALTGD 507


>ref|XP_002519590.1| conserved hypothetical protein [Ricinus communis]
            gi|223541248|gb|EEF42801.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 425

 Score =  249 bits (637), Expect = 9e-64
 Identities = 128/192 (66%), Positives = 153/192 (79%)
 Frame = -3

Query: 1329 FSSLLSKMRLHHVKAEALFGKDILNFDTTALIALVSGISNGGTEKLLATPESELRKRFKS 1150
            F+SL+S  R         +  D++NFDTTALIA+VSGISNG  EKLLA PE +LR+RFK 
Sbjct: 243  FTSLISGFR---------YDGDLVNFDTTALIAIVSGISNGCREKLLAAPEIQLRQRFKG 293

Query: 1149 NYEFVISQVRSELQNPILEELTCVVSGKVCMICESVHLEFKELVSMCGGSKEKLRADQLL 970
            N+EFV+ QV SE+QNPI  E+  ++ GK  +ICESV  EFKELVS+CGG  EKLRAD++L
Sbjct: 294  NFEFVVGQVLSEIQNPIHVEMADIIHGKGGIICESVLSEFKELVSLCGGPNEKLRADKIL 353

Query: 969  KCLLIVPDSPSARMMDILTTRKIASKNKVVFGTGDQWLAPTLTANMGFVRAISQTGMSLL 790
            K L++VPDSPS RMM + TTRK+A KNKVVFGTGD W APTLTANM FVRA+SQTGMSLL
Sbjct: 354  KSLMVVPDSPSERMMCLPTTRKLALKNKVVFGTGDHWRAPTLTANMAFVRAVSQTGMSLL 413

Query: 789  TLEHKPRALTGD 754
            T+EH+PRALTGD
Sbjct: 414  TIEHRPRALTGD 425


>ref|XP_003619781.1| hypothetical protein MTR_6g068920 [Medicago truncatula]
            gi|355494796|gb|AES75999.1| hypothetical protein
            MTR_6g068920 [Medicago truncatula]
          Length = 511

 Score =  248 bits (632), Expect = 3e-63
 Identities = 130/205 (63%), Positives = 156/205 (76%), Gaps = 9/205 (4%)
 Frame = -3

Query: 1341 LGHKFSSLLSKMRLHHVK---------AEALFGKDILNFDTTALIALVSGISNGGTEKLL 1189
            LG  F S++++M+L  +             L   D++NFDTTALIA VSGISNGGTEKLL
Sbjct: 307  LGDTFCSVITRMKLSSLDDSNYESTGPTNLLDESDLVNFDTTALIAFVSGISNGGTEKLL 366

Query: 1188 ATPESELRKRFKSNYEFVISQVRSELQNPILEELTCVVSGKVCMICESVHLEFKELVSMC 1009
            ATPE ELR+RFK N++FVI Q+ SELQNPI  E   V+ GK+ +ICESV  EFKELV MC
Sbjct: 367  ATPEIELRQRFKGNFDFVIGQIMSELQNPIHVEFGKVLCGKLGIICESVLSEFKELVLMC 426

Query: 1008 GGSKEKLRADQLLKCLLIVPDSPSARMMDILTTRKIASKNKVVFGTGDQWLAPTLTANMG 829
            GG  EKLRAD+L+ CL +V D+PS RMM + TTRK+A KNKVVFGTGD + APTLTANM 
Sbjct: 427  GGPNEKLRADKLINCLRVVSDTPSERMMGLPTTRKLALKNKVVFGTGDYYRAPTLTANMA 486

Query: 828  FVRAISQTGMSLLTLEHKPRALTGD 754
            FVRA+SQTGMSL ++EH+PRALTGD
Sbjct: 487  FVRAVSQTGMSLSSIEHRPRALTGD 511


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