BLASTX nr result
ID: Coptis25_contig00025867
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025867 (322 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527272.1| conserved hypothetical protein [Ricinus comm... 59 3e-07 ref|XP_002532310.1| NEDD8 ultimate buster, putative [Ricinus com... 58 9e-07 ref|XP_002324589.1| predicted protein [Populus trichocarpa] gi|2... 58 9e-07 ref|XP_001781827.1| predicted protein [Physcomitrella patens sub... 58 9e-07 ref|XP_002331011.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 >ref|XP_002527272.1| conserved hypothetical protein [Ricinus communis] gi|223533365|gb|EEF35116.1| conserved hypothetical protein [Ricinus communis] Length = 80 Score = 59.3 bits (142), Expect = 3e-07 Identities = 31/46 (67%), Positives = 36/46 (78%), Gaps = 1/46 (2%) Frame = +2 Query: 8 EPRDVEMERAIATELV-GDSLSDYDFEVTEEGEAITEYLALLDIAR 142 E RDVEME IA ++ D+LSDYD +VT+EGEAITEYLALLD R Sbjct: 26 EERDVEMEDEIAEQIAKADALSDYDIDVTKEGEAITEYLALLDSVR 71 >ref|XP_002532310.1| NEDD8 ultimate buster, putative [Ricinus communis] gi|223527979|gb|EEF30062.1| NEDD8 ultimate buster, putative [Ricinus communis] Length = 559 Score = 57.8 bits (138), Expect = 9e-07 Identities = 29/44 (65%), Positives = 36/44 (81%), Gaps = 1/44 (2%) Frame = +2 Query: 5 MEPRDVEMERAIATELV-GDSLSDYDFEVTEEGEAITEYLALLD 133 +E RD+EME IA E+ GD+LSDYD EVT+EGEAI EY+ALL+ Sbjct: 504 VEQRDLEMEDTIAEEIAKGDALSDYDIEVTKEGEAINEYMALLN 547 >ref|XP_002324589.1| predicted protein [Populus trichocarpa] gi|222866023|gb|EEF03154.1| predicted protein [Populus trichocarpa] Length = 578 Score = 57.8 bits (138), Expect = 9e-07 Identities = 31/43 (72%), Positives = 34/43 (79%), Gaps = 1/43 (2%) Frame = +2 Query: 5 MEPRDVEMERAIATELV-GDSLSDYDFEVTEEGEAITEYLALL 130 +E RDVEME IA EL GD+LSDYD EV +EGEAI EYLALL Sbjct: 523 IEQRDVEMEGEIADELARGDALSDYDIEVAKEGEAINEYLALL 565 >ref|XP_001781827.1| predicted protein [Physcomitrella patens subsp. patens] gi|162666734|gb|EDQ53381.1| predicted protein [Physcomitrella patens subsp. patens] Length = 571 Score = 57.8 bits (138), Expect = 9e-07 Identities = 25/44 (56%), Positives = 36/44 (81%) Frame = +2 Query: 2 NMEPRDVEMERAIATELVGDSLSDYDFEVTEEGEAITEYLALLD 133 +++PRD EME IA E+ GD ++YD EV++EG+AI+EYLALL+ Sbjct: 520 DLDPRDEEMEEEIAREITGDPFAEYDIEVSKEGDAISEYLALLN 563 >ref|XP_002331011.1| predicted protein [Populus trichocarpa] gi|222872941|gb|EEF10072.1| predicted protein [Populus trichocarpa] Length = 566 Score = 56.6 bits (135), Expect = 2e-06 Identities = 29/43 (67%), Positives = 35/43 (81%), Gaps = 1/43 (2%) Frame = +2 Query: 8 EPRDVEMERAIATELV-GDSLSDYDFEVTEEGEAITEYLALLD 133 E RD+EME IA EL GD+LSDY+ +VT+EG+AI EYLALLD Sbjct: 523 EQRDLEMEDEIADELTRGDALSDYNIDVTQEGDAINEYLALLD 565