BLASTX nr result

ID: Coptis25_contig00025867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025867
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527272.1| conserved hypothetical protein [Ricinus comm...    59   3e-07
ref|XP_002532310.1| NEDD8 ultimate buster, putative [Ricinus com...    58   9e-07
ref|XP_002324589.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_001781827.1| predicted protein [Physcomitrella patens sub...    58   9e-07
ref|XP_002331011.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002527272.1| conserved hypothetical protein [Ricinus communis]
           gi|223533365|gb|EEF35116.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 80

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/46 (67%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +2

Query: 8   EPRDVEMERAIATELV-GDSLSDYDFEVTEEGEAITEYLALLDIAR 142
           E RDVEME  IA ++   D+LSDYD +VT+EGEAITEYLALLD  R
Sbjct: 26  EERDVEMEDEIAEQIAKADALSDYDIDVTKEGEAITEYLALLDSVR 71


>ref|XP_002532310.1| NEDD8 ultimate buster, putative [Ricinus communis]
           gi|223527979|gb|EEF30062.1| NEDD8 ultimate buster,
           putative [Ricinus communis]
          Length = 559

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/44 (65%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
 Frame = +2

Query: 5   MEPRDVEMERAIATELV-GDSLSDYDFEVTEEGEAITEYLALLD 133
           +E RD+EME  IA E+  GD+LSDYD EVT+EGEAI EY+ALL+
Sbjct: 504 VEQRDLEMEDTIAEEIAKGDALSDYDIEVTKEGEAINEYMALLN 547


>ref|XP_002324589.1| predicted protein [Populus trichocarpa] gi|222866023|gb|EEF03154.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/43 (72%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
 Frame = +2

Query: 5   MEPRDVEMERAIATELV-GDSLSDYDFEVTEEGEAITEYLALL 130
           +E RDVEME  IA EL  GD+LSDYD EV +EGEAI EYLALL
Sbjct: 523 IEQRDVEMEGEIADELARGDALSDYDIEVAKEGEAINEYLALL 565


>ref|XP_001781827.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162666734|gb|EDQ53381.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 571

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/44 (56%), Positives = 36/44 (81%)
 Frame = +2

Query: 2   NMEPRDVEMERAIATELVGDSLSDYDFEVTEEGEAITEYLALLD 133
           +++PRD EME  IA E+ GD  ++YD EV++EG+AI+EYLALL+
Sbjct: 520 DLDPRDEEMEEEIAREITGDPFAEYDIEVSKEGDAISEYLALLN 563


>ref|XP_002331011.1| predicted protein [Populus trichocarpa] gi|222872941|gb|EEF10072.1|
           predicted protein [Populus trichocarpa]
          Length = 566

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/43 (67%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
 Frame = +2

Query: 8   EPRDVEMERAIATELV-GDSLSDYDFEVTEEGEAITEYLALLD 133
           E RD+EME  IA EL  GD+LSDY+ +VT+EG+AI EYLALLD
Sbjct: 523 EQRDLEMEDEIADELTRGDALSDYNIDVTQEGDAINEYLALLD 565


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