BLASTX nr result

ID: Coptis25_contig00025861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025861
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517336.1| PREDICTED: BTB/POZ domain-containing protein...    99   2e-34
ref|XP_002284242.2| PREDICTED: BTB/POZ domain-containing protein...    97   7e-34
ref|XP_002533158.1| Root phototropism protein, putative [Ricinus...    97   1e-33
ref|XP_003538794.1| PREDICTED: BTB/POZ domain-containing protein...    97   2e-33
emb|CAN71562.1| hypothetical protein VITISV_007563 [Vitis vinifera]    97   1e-32

>ref|XP_003517336.1| PREDICTED: BTB/POZ domain-containing protein At5g67385-like
           [Glycine max]
          Length = 618

 Score = 99.0 bits (245), Expect(2) = 2e-34
 Identities = 45/55 (81%), Positives = 51/55 (92%)
 Frame = +2

Query: 320 ASFTLHKFPLVSKCGYIRKSVSGASDVDLSVLELPDIPGGAEAFELAAKFCYGIN 484
           ASF+LHKFPLVSKCGYIRK VS ++D D+S +ELPD+PGGAEAFELAAKFCYGIN
Sbjct: 51  ASFSLHKFPLVSKCGYIRKLVSESNDADVSFIELPDVPGGAEAFELAAKFCYGIN 105



 Score = 72.0 bits (175), Expect(2) = 2e-34
 Identities = 35/57 (61%), Positives = 43/57 (75%)
 Frame = +3

Query: 93  MVEPDREETAAISLPTFAKKKQLLSSAMRRTSEWIFSQEIPSDITVQAGGASFTLHK 263
           M++  +E+T         KKK+LLSSAM+RTSEWIFSQEIPSD+ VQ G ASF+LHK
Sbjct: 1   MMDRGQEKTVPAGSDLSLKKKELLSSAMKRTSEWIFSQEIPSDVNVQVGEASFSLHK 57


>ref|XP_002284242.2| PREDICTED: BTB/POZ domain-containing protein At5g67385-like isoform
           1 [Vitis vinifera]
          Length = 636

 Score = 97.1 bits (240), Expect(2) = 7e-34
 Identities = 45/54 (83%), Positives = 50/54 (92%)
 Frame = +2

Query: 323 SFTLHKFPLVSKCGYIRKSVSGASDVDLSVLELPDIPGGAEAFELAAKFCYGIN 484
           SF+LHKFPLVSKCGYIRK VS +SD DLSV+E+ D+PGGAEAFELAAKFCYGIN
Sbjct: 52  SFSLHKFPLVSKCGYIRKLVSESSDADLSVIEVHDVPGGAEAFELAAKFCYGIN 105



 Score = 72.0 bits (175), Expect(2) = 7e-34
 Identities = 35/57 (61%), Positives = 45/57 (78%)
 Frame = +3

Query: 93  MVEPDREETAAISLPTFAKKKQLLSSAMRRTSEWIFSQEIPSDITVQAGGASFTLHK 263
           MV+  +E  A  ++   +KKK+LLS+AM+RTSEWIFSQEIPSD+TV AG  SF+LHK
Sbjct: 1   MVDLQQEGIAPTTVNMSSKKKELLSTAMKRTSEWIFSQEIPSDVTVHAGEVSFSLHK 57


>ref|XP_002533158.1| Root phototropism protein, putative [Ricinus communis]
           gi|223527030|gb|EEF29217.1| Root phototropism protein,
           putative [Ricinus communis]
          Length = 621

 Score = 97.4 bits (241), Expect(2) = 1e-33
 Identities = 45/54 (83%), Positives = 49/54 (90%)
 Frame = +2

Query: 323 SFTLHKFPLVSKCGYIRKSVSGASDVDLSVLELPDIPGGAEAFELAAKFCYGIN 484
           SF+LHKFPLVSKCGYIRK VS +SD DL  +E+PDIPGGAEAFELAAKFCYGIN
Sbjct: 57  SFSLHKFPLVSKCGYIRKLVSESSDADLGEIEIPDIPGGAEAFELAAKFCYGIN 110



 Score = 70.9 bits (172), Expect(2) = 1e-33
 Identities = 33/48 (68%), Positives = 41/48 (85%)
 Frame = +3

Query: 120 AAISLPTFAKKKQLLSSAMRRTSEWIFSQEIPSDITVQAGGASFTLHK 263
           AA +    +KKK+LL++AM+RTSEWIFSQEIPSD+TV AGG SF+LHK
Sbjct: 15  AAAATNMSSKKKELLTTAMKRTSEWIFSQEIPSDVTVHAGGVSFSLHK 62


>ref|XP_003538794.1| PREDICTED: BTB/POZ domain-containing protein At5g67385-like
           [Glycine max]
          Length = 617

 Score = 97.4 bits (241), Expect(2) = 2e-33
 Identities = 44/55 (80%), Positives = 51/55 (92%)
 Frame = +2

Query: 320 ASFTLHKFPLVSKCGYIRKSVSGASDVDLSVLELPDIPGGAEAFELAAKFCYGIN 484
           ASF+LHKFPLVSKCGYIRK VS ++D D+S +ELP++PGGAEAFELAAKFCYGIN
Sbjct: 50  ASFSLHKFPLVSKCGYIRKLVSESNDADVSFIELPEVPGGAEAFELAAKFCYGIN 104



 Score = 70.5 bits (171), Expect(2) = 2e-33
 Identities = 34/52 (65%), Positives = 40/52 (76%)
 Frame = +3

Query: 108 REETAAISLPTFAKKKQLLSSAMRRTSEWIFSQEIPSDITVQAGGASFTLHK 263
           +E+T         KKK+LLSSAM+RTSEWIFSQEIPSD+ VQ G ASF+LHK
Sbjct: 5   QEKTVPAGCDLSLKKKELLSSAMKRTSEWIFSQEIPSDVNVQVGEASFSLHK 56


>emb|CAN71562.1| hypothetical protein VITISV_007563 [Vitis vinifera]
          Length = 621

 Score = 97.1 bits (240), Expect(2) = 1e-32
 Identities = 45/54 (83%), Positives = 50/54 (92%)
 Frame = +2

Query: 323 SFTLHKFPLVSKCGYIRKSVSGASDVDLSVLELPDIPGGAEAFELAAKFCYGIN 484
           SF+LHKFPLVSKCGYIRK VS +SD DLSV+E+ D+PGGAEAFELAAKFCYGIN
Sbjct: 37  SFSLHKFPLVSKCGYIRKLVSESSDADLSVIEVHDVPGGAEAFELAAKFCYGIN 90



 Score = 68.2 bits (165), Expect(2) = 1e-32
 Identities = 31/40 (77%), Positives = 37/40 (92%)
 Frame = +3

Query: 144 AKKKQLLSSAMRRTSEWIFSQEIPSDITVQAGGASFTLHK 263
           +KKK+LLS+AM+RTSEWIFSQEIPSD+TV AG  SF+LHK
Sbjct: 3   SKKKELLSTAMKRTSEWIFSQEIPSDVTVHAGEVSFSLHK 42


Top