BLASTX nr result

ID: Coptis25_contig00025859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025859
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620351.1| hypothetical protein MTR_6g081810 [Medicago ...    58   7e-07
ref|XP_003634196.1| PREDICTED: MATE efflux family protein 6 [Vit...    57   1e-06
emb|CBI15521.3| unnamed protein product [Vitis vinifera]               57   1e-06
ref|XP_002280423.1| PREDICTED: MATE efflux family protein 6 isof...    57   1e-06
gb|AFK43870.1| unknown [Medicago truncatula]                           56   3e-06

>ref|XP_003620351.1| hypothetical protein MTR_6g081810 [Medicago truncatula]
           gi|355495366|gb|AES76569.1| hypothetical protein
           MTR_6g081810 [Medicago truncatula]
          Length = 496

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/44 (59%), Positives = 33/44 (75%)
 Frame = -2

Query: 474 QGLWMGIICALFVQLLMLVTIILRTDWDKEARKTMDGVKTFIIT 343
           +GLW+GIICALFVQ++ L  I +RTDW+KEA+K  D V   I T
Sbjct: 448 KGLWLGIICALFVQVVSLTIITIRTDWEKEAKKATDRVYDSITT 491


>ref|XP_003634196.1| PREDICTED: MATE efflux family protein 6 [Vitis vinifera]
          Length = 399

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/48 (54%), Positives = 35/48 (72%)
 Frame = -2

Query: 474 QGLWMGIICALFVQLLMLVTIILRTDWDKEARKTMDGVKTFIITSDTG 331
           +GLW+GIICAL VQ+L L+ + LRT+W+ EA+K  D V   II  +TG
Sbjct: 349 RGLWLGIICALIVQVLSLLIVTLRTNWEDEAKKATDRVYDAIIPIETG 396


>emb|CBI15521.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/48 (54%), Positives = 35/48 (72%)
 Frame = -2

Query: 474 QGLWMGIICALFVQLLMLVTIILRTDWDKEARKTMDGVKTFIITSDTG 331
           +GLW+GIICAL VQ+L L+ + LRT+W+ EA+K  D V   II  +TG
Sbjct: 513 RGLWLGIICALIVQVLSLLIVTLRTNWEDEAKKATDRVYDAIIPIETG 560


>ref|XP_002280423.1| PREDICTED: MATE efflux family protein 6 isoform 2 [Vitis vinifera]
          Length = 493

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/48 (54%), Positives = 35/48 (72%)
 Frame = -2

Query: 474 QGLWMGIICALFVQLLMLVTIILRTDWDKEARKTMDGVKTFIITSDTG 331
           +GLW+GIICAL VQ+L L+ + LRT+W+ EA+K  D V   II  +TG
Sbjct: 443 RGLWLGIICALIVQVLSLLIVTLRTNWEDEAKKATDRVYDAIIPIETG 490


>gb|AFK43870.1| unknown [Medicago truncatula]
          Length = 449

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/44 (56%), Positives = 32/44 (72%)
 Frame = -2

Query: 474 QGLWMGIICALFVQLLMLVTIILRTDWDKEARKTMDGVKTFIIT 343
           +GLW+GIICALFVQ++ L  I +RTDW+KEA+   D V   I T
Sbjct: 401 KGLWLGIICALFVQVVSLTIITIRTDWEKEAKNATDRVYDSITT 444


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